TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 8 - 117 | 1.3e-10 | NB-ARC domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 111 |
| AciI | CCGC | 2 cut(s) | 244, 416 |
| AclWI | GGATC | 1 cut(s) | 270 |
| AfaI | GTAC | 1 cut(s) | 198 |
| AgsI | TTSAA | 2 cut(s) | 143, 232 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 342, 374 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 427 |
| AluBI | AGCT | 1 cut(s) | 146 |
| AluI | AGCT | 1 cut(s) | 146 |
| AlwI | GGATC | 1 cut(s) | 270 |
| ApeKI | GCWGC | 2 cut(s) | 367, 409 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 427 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 213 |
| AspLEI | GCGC | 1 cut(s) | 113 |
| AsuHPI | GGTGA | 1 cut(s) | 430 |
| BbvI | GCAGC | 2 cut(s) | 379, 421 |
| BccI | CCATC | 1 cut(s) | 110 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfmI | CTRYAG | 1 cut(s) | 407 |
| BisI | GCNGC | 2 cut(s) | 368, 410 |
| BlsI | GCNGC | 2 cut(s) | 369, 411 |
| Bme1390I | CCNGG | 1 cut(s) | 42 |
| BmiI | GGNNCC | 1 cut(s) | 271 |
| BmrFI | CCNGG | 1 cut(s) | 42 |
| BmrI | ACTGGG | 1 cut(s) | 447 |
| BmuI | ACTGGG | 1 cut(s) | 447 |
| BsaJI | CCNNGG | 1 cut(s) | 41 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 433 |
| Bse1I | ACTGG | 1 cut(s) | 442 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 41 |
| BseNI | ACTGG | 1 cut(s) | 442 |
| BseXI | GCAGC | 2 cut(s) | 379, 421 |
| BsgI | GTGCAG | 1 cut(s) | 213 |
| Bsh1236I | CGCG | 1 cut(s) | 111 |
| BsmI | GAATGC | 1 cut(s) | 370 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspACI | CCGC | 2 cut(s) | 244, 416 |
| BspFNI | CGCG | 1 cut(s) | 111 |
| BspLI | GGNNCC | 1 cut(s) | 271 |
| BspMAI | CTGCAG | 1 cut(s) | 411 |
| BspPI | GGATC | 1 cut(s) | 270 |
| BsrI | ACTGG | 1 cut(s) | 442 |
| BssECI | CCNNGG | 1 cut(s) | 41 |
| BssMI | GATC | 1 cut(s) | 262 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 2 cut(s) | 109, 414 |
| BstFNI | CGCG | 1 cut(s) | 111 |
| BstHHI | GCGC | 1 cut(s) | 113 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 211 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstSCI | CCNGG | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 1 cut(s) | 407 |
| BstUI | CGCG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 2 cut(s) | 379, 421 |
| BtgZI | GCGATG | 1 cut(s) | 88 |
| Cac8I | GCNNGC | 2 cut(s) | 109, 414 |
| CfoI | GCGC | 1 cut(s) | 113 |
| Csp6I | GTAC | 1 cut(s) | 197 |
| CviAII | CATG | 2 cut(s) | 401, 429 |
| CviJI | RGCY | 4 cut(s) | 146, 177, 292, 353 |
| CviKI_1 | RGCY | 4 cut(s) | 146, 177, 292, 353 |
| CviQI | GTAC | 1 cut(s) | 197 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| FaeI | CATG | 2 cut(s) | 404, 432 |
| FaiI | YATR | 8 cut(s) | 14, 73, 89, 120, 201, 203, 402, 430 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 161, 193, 201, 233, 342, 374 |
| FatI | CATG | 2 cut(s) | 400, 428 |
| FauNDI | CATATG | 1 cut(s) | 201 |
| Fnu4HI | GCNGC | 2 cut(s) | 368, 410 |
| Fsp4HI | GCNGC | 2 cut(s) | 368, 410 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GlaI | GCGC | 1 cut(s) | 112 |
| GluI | GCNGC | 2 cut(s) | 368, 410 |
| HhaI | GCGC | 1 cut(s) | 113 |
| Hin1II | CATG | 2 cut(s) | 404, 432 |
| Hin6I | GCGC | 1 cut(s) | 111 |
| HinP1I | GCGC | 1 cut(s) | 111 |
| HincII | GTYRAC | 1 cut(s) | 331 |
| HindII | GTYRAC | 1 cut(s) | 331 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 1 cut(s) | 424 |
| HphI | GGTGA | 1 cut(s) | 430 |
| Hpy166II | GTNNAC | 1 cut(s) | 331 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 222, 320 |
| Hpy8I | GTNNAC | 1 cut(s) | 331 |
| HpyAV | CCTTC | 3 cut(s) | 167, 226, 291 |
| HpyCH4IV | ACGT | 3 cut(s) | 37, 257, 327 |
| HpyCH4V | TGCA | 3 cut(s) | 194, 205, 409 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 211 |
| HpySE526I | ACGT | 3 cut(s) | 37, 257, 327 |
| Hsp92II | CATG | 2 cut(s) | 404, 432 |
| HspAI | GCGC | 1 cut(s) | 111 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LpnPI | CCDG | 4 cut(s) | 27, 54, 191, 423 |
| Lsp1109I | GCAGC | 2 cut(s) | 379, 421 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeII | ACGT | 3 cut(s) | 37, 257, 327 |
| MaeIII | GTNAC | 1 cut(s) | 27 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MluCI | AATT | 2 cut(s) | 137, 335 |
| MmeI | TCCRAC | 3 cut(s) | 46, 240, 413 |
| MnlI | CCTC | 3 cut(s) | 77, 260, 414 |
| MroXI | GAANNNNTTC | 1 cut(s) | 213 |
| MseI | TTAA | 1 cut(s) | 168 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspR9I | CCNGG | 1 cut(s) | 42 |
| Mva1269I | GAATGC | 1 cut(s) | 370 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| MvnI | CGCG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 211 |
| NdeI | CATATG | 1 cut(s) | 201 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 2 cut(s) | 404, 432 |
| NlaIV | GGNNCC | 1 cut(s) | 271 |
| PctI | GAATGC | 1 cut(s) | 370 |
| PdmI | GAANNNNTTC | 1 cut(s) | 213 |
| PfeI | GAWTC | 1 cut(s) | 424 |
| PkrI | GCNGC | 2 cut(s) | 369, 411 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 1 cut(s) | 271 |
| PstI | CTGCAG | 1 cut(s) | 411 |
| RsaI | GTAC | 1 cut(s) | 198 |
| RsaNI | GTAC | 1 cut(s) | 197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 2 cut(s) | 368, 410 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| ScrFI | CCNGG | 1 cut(s) | 42 |
| SetI | ASST | 7 cut(s) | 40, 88, 148, 243, 260, 271, 330 |
| SfcI | CTRYAG | 1 cut(s) | 407 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| Sse9I | AATT | 2 cut(s) | 137, 335 |
| SsiI | CCGC | 2 cut(s) | 244, 416 |
| SspI | AATATT | 1 cut(s) | 228 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 1 cut(s) | 40 |
| TaiI | ACGT | 3 cut(s) | 40, 260, 330 |
| TaqI | TCGA | 3 cut(s) | 159, 265, 348 |
| TasI | AATT | 2 cut(s) | 137, 335 |
| TatI | WGTACW | 1 cut(s) | 196 |
| TfiI | GAWTC | 1 cut(s) | 424 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TseI | GCWGC | 2 cut(s) | 367, 409 |
| TspDTI | ATGAA | 6 cut(s) | 33, 38, 138, 299, 301, 363 |
| XbaI | TCTAGA | 1 cut(s) | 221 |
| XmnI | GAANNNNTTC | 1 cut(s) | 213 |
| XspI | CTAG | 1 cut(s) | 222 |