RchiOBHm_Chr6g0270371

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
28178255 .. 28182777
4523 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24256

Sequence Viewer

Length: 1623 bp
ATGGGTTGTAGTTACATTAAACAACTTTGGGATGGAATCCAGGCCCTGCAAAATTTGAAAATCATCAAGTTAAGTCACTGTCAATACCTTGTCGAAATCCCTGACTTAATTGAGGCGATAAATCTTCAGAAACTATTTCTTGATGGCTGTTCAAGTTTATTTGAGGTTCATTCATCCATTTCTGCTCTTCAAAACCTTCATTTCTTGGATCTAAAGGGGTGCAAGCAACTTAAGATTCTGCCAAGCTGCATTCATATGAAATCTCTACGGATCCTTCGTCTTTCTAGCTGTTCAAATCTCGAAAAGTTTCCAGAGATTTCAGAGGTTATGGTGAAGCTAAAATGGCTTTATTTAGATGGGACTGCAATTAAAGAACTGCCCTCATCTATTAACAATCTCACTGGAATTGTTACTTTAGATCTGAAAGGTTGCACAGAACTTAAGACTCTACCAACTGGCATTCAGATGAGTTCTCTTCAGACCCTTGTCCTCGTTGGCTGCTCAAATCTTGAAAAGTTTCCGGAGATTTCAGGAATCATGAAGGAGCTGCTAGAGCTTCGTTTAGATGAGACAGCAATTGAAGGACTACCCTCATCGATTGATCGGCTTCTGGGGATTAAAAAATTAAGCATGCGGAACTGCAAAAGCCTTAAACTTCTTCCTGACATTATCTGTAATTTGGCGGACCTTACACATCTGGATCTGTCTGGGTGCTCAGTACTTCATAAGTTGCCTGAGAAATTGGGGGACTTAGAATCCTTGACGTGCCTTGAAGTACTGGGAAGTGGCATAAAGCATTTCCCATTCTCTGTCTGCTCAAACAAGAAGTTAGTGAGATATTCATTTCATGAATGTGAAGAAATGTTGGAACCATTTTCATCATCGTCATCACTAATCAGATATTATAGTTTCTCTTGTCTGGTTCATCTTGATTTAAGTGACTGCAATCTGTTGGAATTTTCAGATGCTGTTGCGCATTTGCCATCATTGAAAACTTTAAAGCTATGCAGAAACAATTTGGAATGCTTACCTGCAACAATGAATCAACTTGGTTGTTTAACACATCTTGAAGTCAAAGCTTGTAGGAGACTGAAATCAATACCTGAGCTTTCAAGTATTAGTTACATAAATGCGCAGTATTGCGCAGCTCTGGAAACAGTTTCAACACCAAAGACTGATTGTAGAAATCTTGACTTCAGATTTTCTAACTGCTTCCGGCTGTTACAAGTAAATCTGTTTATAGATATTGTTGAAACACATTTTGTTTACCAGGATTATCATCTTCGACCTCTTTCATGCAATACGTGTTTTCCTGAAAGTGAAATTCCCAATTGGTTCAGCCATCAGTCCAGGGCTTCTTCAATCACTGTCCAGCTACCACCGAATTGGTTTGATAAGTTGTTTTTGGGATTGGCGCTATGTGCTGTTAGTTGCTTCAATGAGGCTGATCCAAGTTATGCACCTCATGTAGCTGCTCTATGTTACTGTACCTTCAAAGGAAATCAAGGTGACCACAATTTCAGTTTTATTTGCAAGATTGCGGATTCCTGGAGTCAGATCACTTGTTCATGGAATACGTACCATGGTCTAAATTTAGCTTGGCTGAAAAAGGAGAGCCGGTGA

Protein Analysis

540

Amino Acids

60.82

Weight (kDa)

6.62

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 77 - 191 6.5e-12 Leucine-rich repeat region
LRR_13 PF23286 86 - 156 2.1e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 157 - 242 1.7e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 182 - 259 5.8e-06 Leucine-rich repeat region
LRR_14 PF23598 209 - 287 6e-07 Leucine-rich repeat region
LRR_13 PF23286 242 - 406 1.1e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 307 - 376 2.6e-06 Leucine-rich repeat region
LRR_8 PF13855 307 - 360 4.6e-06 Leucine rich repeat
C-JID PF20160 437 - 527 2e-16 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 3 cut(s) 975, 1134, 1144
Acc36I ACCTGC 1 cut(s) 1039
AccIII TCCGGA 1 cut(s) 520
AciI CCGC 3 cut(s) 634, 683, 1541
AclWI GGATC 5 cut(s) 216, 265, 278, 708, 1442
AcsI RAATTY 4 cut(s) 52, 956, 1323, 1591
AcuI CTGAAG 3 cut(s) 110, 461, 1180
AfaI GTAC 4 cut(s) 720, 777, 1489, 1580
AflII CTTAAG 2 cut(s) 230, 440
AflIII ACRYGT 1 cut(s) 1304
AjiI CACGTC 1 cut(s) 765
AjnI CCWGG 4 cut(s) 39, 1269, 1349, 1547
Alw21I GWGCWC 1 cut(s) 716
Alw26I GTCTC 2 cut(s) 563, 1081
AlwI GGATC 5 cut(s) 216, 265, 278, 708, 1442
AlwNI CAGNNNCTG 2 cut(s) 46, 968
Aor13HI TCCGGA 1 cut(s) 520
AoxI GGCC 1 cut(s) 42
ApeKI GCWGC 5 cut(s) 246, 498, 547, 1145, 1472
ApoI RAATTY 4 cut(s) 52, 956, 1323, 1591
Asp700I GAANNNNTTC 2 cut(s) 306, 516
AspLEI GCGC 4 cut(s) 976, 1135, 1145, 1417
AspS9I GGNCC 2 cut(s) 43, 685
AsuHPI GGTGA 2 cut(s) 343, 1520
AvaII GGWCC 1 cut(s) 685
BamHI GGATCC 1 cut(s) 270
Bbv12I GWGCWC 1 cut(s) 716
BbvI GCAGC 5 cut(s) 233, 485, 534, 1157, 1459
BccI CCATC 5 cut(s) 26, 137, 350, 991, 1350
BciT130I CCWGG 4 cut(s) 41, 1271, 1351, 1549
BcoDI GTCTC 2 cut(s) 563, 1081
BfaI CTAG 2 cut(s) 285, 551
BfoI RGCGCY 1 cut(s) 1418
BfrI CTTAAG 2 cut(s) 230, 440
BfuAI ACCTGC 1 cut(s) 1039
BglII AGATCT 1 cut(s) 418
BisI GCNGC 5 cut(s) 247, 499, 548, 1146, 1473
BlsI GCNGC 5 cut(s) 248, 500, 549, 1147, 1474
BmcAI AGTACT 2 cut(s) 720, 777
Bme1390I CCNGG 4 cut(s) 41, 1271, 1351, 1549
Bme18I GGWCC 1 cut(s) 685
BmgBI CACGTC 1 cut(s) 765
BmgT120I GGNCC 2 cut(s) 43, 685
BmiI GGNNCC 2 cut(s) 272, 870
BmrFI CCNGG 4 cut(s) 41, 1271, 1351, 1549
BmrI ACTGGG 1 cut(s) 788
BmsI GCATC 1 cut(s) 955
BmuI ACTGGG 1 cut(s) 788
BoxI GACNNNNGTC 1 cut(s) 485
BpmI CTGGAG 1 cut(s) 1570
Bpu10I CCTNAGC 1 cut(s) 1104
Bsa29I ATCGAT 1 cut(s) 596
BsaAI YACGTR 2 cut(s) 1305, 1578
BsaBI GATNNNNATC 1 cut(s) 1278
BsaJI CCNNGG 2 cut(s) 1350, 1582
BsaWI WCCGGW 1 cut(s) 520
BsaXI ACNNNNNCTCC 1 cut(s) 1604
Bse118I RCCGGY 1 cut(s) 1617
Bse1I ACTGG 3 cut(s) 406, 460, 783
Bse8I GATNNNNATC 1 cut(s) 1278
BseAI TCCGGA 1 cut(s) 520
BseBI CCWGG 4 cut(s) 41, 1271, 1351, 1549
BseCI ATCGAT 1 cut(s) 596
BseDI CCNNGG 2 cut(s) 1350, 1582
BseGI GGATG 2 cut(s) 37, 173
BseJI GATNNNNATC 1 cut(s) 1278
BseMII CTCAG 3 cut(s) 726, 729, 1095
BseNI ACTGG 3 cut(s) 406, 460, 783
BseXI GCAGC 5 cut(s) 233, 485, 534, 1157, 1459
BshFI GGCC 1 cut(s) 44
BshVI ATCGAT 1 cut(s) 596
BsiHKAI GWGCWC 1 cut(s) 716
BsiSI CCGG 3 cut(s) 521, 1216, 1618
BslFI GGGAC 2 cut(s) 373, 761
BsmAI GTCTC 2 cut(s) 563, 1081
BsmFI GGGAC 2 cut(s) 373, 761
BsmI GAATGC 3 cut(s) 249, 459, 1028
BsnI GGCC 1 cut(s) 44
Bsp1286I GDGCHC 1 cut(s) 716
Bsp13I TCCGGA 1 cut(s) 520
Bsp143I GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
Bsp19I CCATGG 1 cut(s) 1582
BspACI CCGC 3 cut(s) 634, 683, 1541
BspANI GGCC 1 cut(s) 44
BspCNI CTCAG 3 cut(s) 727, 728, 1096
BspDI ATCGAT 1 cut(s) 596
BspEI TCCGGA 1 cut(s) 520
BspHI TCATGA 2 cut(s) 537, 847
BspLI GGNNCC 2 cut(s) 272, 870
BspMI ACCTGC 1 cut(s) 1039
BspPI GGATC 5 cut(s) 216, 265, 278, 708, 1442
BspQI GCTCTTC 1 cut(s) 192
BspTI CTTAAG 2 cut(s) 230, 440
BsrFI RCCGGY 1 cut(s) 1617
BsrI ACTGG 3 cut(s) 406, 460, 783
BssAI RCCGGY 1 cut(s) 1617
BssECI CCNNGG 2 cut(s) 1350, 1582
BssMI GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
BssT1I CCWWGG 1 cut(s) 1582
Bst2UI CCWGG 4 cut(s) 41, 1271, 1351, 1549
Bst4CI ACNGT 4 cut(s) 80, 1159, 1369, 1487
Bst6I CTCTTC 2 cut(s) 192, 480
BstAFI CTTAAG 2 cut(s) 230, 440
BstBAI YACGTR 2 cut(s) 1305, 1578
BstC8I GCNNGC 2 cut(s) 224, 632
BstDEI CTNAG 4 cut(s) 715, 735, 751, 1104
BstDSI CCRYGG 1 cut(s) 1582
BstEII GGTNACC 1 cut(s) 1508
BstF5I GGATG 2 cut(s) 37, 173
BstH2I RGCGCY 1 cut(s) 1418
BstHHI GCGC 4 cut(s) 976, 1135, 1145, 1417
BstKTI GATC 7 cut(s) 211, 273, 421, 604, 703, 1450, 1560
BstMAI GTCTC 2 cut(s) 563, 1081
BstMBI GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
BstMWI GCNNNNNNNGC 3 cut(s) 343, 553, 1421
BstNI CCWGG 4 cut(s) 41, 1271, 1351, 1549
BstNSI RCATGY 1 cut(s) 634
BstPAI GACNNNNGTC 1 cut(s) 485
BstPI GGTNACC 1 cut(s) 1508
BstSCI CCNGG 4 cut(s) 39, 1269, 1349, 1547
BstSNI TACGTA 1 cut(s) 1578
BstV1I GCAGC 5 cut(s) 233, 485, 534, 1157, 1459
BstX2I RGATCY 4 cut(s) 208, 270, 418, 700
BstXI CCANNNNNNTGG 1 cut(s) 1386
BstYI RGATCY 4 cut(s) 208, 270, 418, 700
Bsu15I ATCGAT 1 cut(s) 596
BsuRI GGCC 1 cut(s) 44
BsuTUI ATCGAT 1 cut(s) 596
BtgI CCRYGG 1 cut(s) 1582
BtrI CACGTC 1 cut(s) 765
BtsCI GGATG 2 cut(s) 37, 173
BtsIMutI CAGTG 3 cut(s) 76, 399, 1365
BveI ACCTGC 1 cut(s) 1039
Cac8I GCNNGC 2 cut(s) 224, 632
CaiI CAGNNNCTG 2 cut(s) 46, 968
CciI TCATGA 2 cut(s) 537, 847
CfoI GCGC 4 cut(s) 976, 1135, 1145, 1417
Cfr10I RCCGGY 1 cut(s) 1617
Cfr13I GGNCC 2 cut(s) 43, 685
ClaI ATCGAT 1 cut(s) 596
Csp6I GTAC 4 cut(s) 719, 776, 1488, 1579
CviAII CATG 7 cut(s) 538, 631, 848, 1296, 1466, 1569, 1583
CviQI GTAC 4 cut(s) 719, 776, 1488, 1579
DdeI CTNAG 4 cut(s) 715, 735, 751, 1104
DpnI GATC 7 cut(s) 210, 272, 420, 603, 702, 1449, 1559
DpnII GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
DraI TTTAAA 1 cut(s) 999
Eam1104I CTCTTC 2 cut(s) 192, 480
EarI CTCTTC 2 cut(s) 192, 480
EciI GGCGGA 1 cut(s) 698
Eco105I TACGTA 1 cut(s) 1578
Eco130I CCWWGG 1 cut(s) 1582
Eco47I GGWCC 1 cut(s) 685
Eco57I CTGAAG 3 cut(s) 110, 461, 1180
Eco91I GGTNACC 1 cut(s) 1508
EcoO109I RGGNCCY 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 1508
EcoRII CCWGG 4 cut(s) 39, 1269, 1349, 1547
EcoT14I CCWWGG 1 cut(s) 1582
ErhI CCWWGG 1 cut(s) 1582
FaeI CATG 7 cut(s) 541, 634, 851, 1299, 1469, 1572, 1586
FaqI GGGAC 2 cut(s) 373, 761
FatI CATG 7 cut(s) 537, 630, 847, 1295, 1465, 1568, 1582
FauNDI CATATG 1 cut(s) 255
Fnu4HI GCNGC 5 cut(s) 247, 499, 548, 1146, 1473
FokI GGATG 2 cut(s) 44, 160
Fsp4HI GCNGC 5 cut(s) 247, 499, 548, 1146, 1473
FspBI CTAG 2 cut(s) 285, 551
FspI TGCGCA 3 cut(s) 975, 1134, 1144
GlaI GCGC 4 cut(s) 975, 1134, 1144, 1416
GluI GCNGC 5 cut(s) 247, 499, 548, 1146, 1473
GsuI CTGGAG 1 cut(s) 1570
HaeII RGCGCY 1 cut(s) 1418
HaeIII GGCC 1 cut(s) 44
HapII CCGG 3 cut(s) 521, 1216, 1618
HhaI GCGC 4 cut(s) 976, 1135, 1145, 1417
Hin1II CATG 7 cut(s) 541, 634, 851, 1299, 1469, 1572, 1586
Hin6I GCGC 4 cut(s) 974, 1133, 1143, 1415
HinP1I GCGC 4 cut(s) 974, 1133, 1143, 1415
HindIII AAGCTT 1 cut(s) 1077
HinfI GANTC 8 cut(s) 36, 235, 445, 534, 755, 1042, 1544, 1552
HpaII CCGG 3 cut(s) 521, 1216, 1618
HphI GGTGA 2 cut(s) 343, 1520
Hpy166II GTNNAC 1 cut(s) 1267
Hpy188I TCNGA 9 cut(s) 129, 322, 423, 465, 480, 899, 964, 1199, 1557
Hpy8I GTNNAC 1 cut(s) 1267
HpyAV CCTTC 5 cut(s) 206, 284, 535, 575, 1501
HpyCH4III ACNGT 4 cut(s) 80, 1159, 1369, 1487
HpyCH4IV ACGT 3 cut(s) 764, 1304, 1577
HpyF10VI GCNNNNNNNGC 3 cut(s) 343, 553, 1421
HpyF3I CTNAG 4 cut(s) 715, 735, 751, 1104
HpySE526I ACGT 3 cut(s) 764, 1304, 1577
Hsp92II CATG 7 cut(s) 541, 634, 851, 1299, 1469, 1572, 1586
HspAI GCGC 4 cut(s) 974, 1133, 1143, 1415
Kpn2I TCCGGA 1 cut(s) 520
Kzo9I GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
LguI GCTCTTC 1 cut(s) 192
LmnI GCTCC 1 cut(s) 544
Lsp1109I GCAGC 5 cut(s) 233, 485, 534, 1157, 1459
LweI GCATC 1 cut(s) 955
MaeI CTAG 2 cut(s) 285, 551
MaeII ACGT 3 cut(s) 764, 1304, 1577
MaeIII GTNAC 8 cut(s) 11, 74, 409, 938, 1121, 1221, 1481, 1508
MalI GATC 7 cut(s) 210, 272, 420, 603, 702, 1449, 1559
MboI GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
MboII GAAGA 7 cut(s) 116, 179, 467, 650, 869, 1274, 1350
MfeI CAATTG 2 cut(s) 576, 1330
MflI RGATCY 4 cut(s) 208, 270, 418, 700
MhlI GDGCHC 1 cut(s) 716
MlyI GAGTC 2 cut(s) 439, 1561
MmeI TCCRAC 2 cut(s) 846, 933
MnlI CCTC 9 cut(s) 106, 157, 316, 391, 500, 601, 1299, 1435, 1473
MroI TCCGGA 1 cut(s) 520
MroXI GAANNNNTTC 2 cut(s) 306, 516
MslI CAYNNNNRTG 3 cut(s) 254, 464, 852
MspCI CTTAAG 2 cut(s) 230, 440
MspI CCGG 3 cut(s) 521, 1216, 1618
MspR9I CCNGG 4 cut(s) 41, 1271, 1351, 1549
MunI CAATTG 2 cut(s) 576, 1330
Mva1269I GAATGC 3 cut(s) 249, 459, 1028
MvaI CCWGG 4 cut(s) 41, 1271, 1351, 1549
MwoI GCNNNNNNNGC 3 cut(s) 343, 553, 1421
NcoI CCATGG 1 cut(s) 1582
NdeI CATATG 1 cut(s) 255
NdeII GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
NlaIII CATG 7 cut(s) 541, 634, 851, 1299, 1469, 1572, 1586
NlaIV GGNNCC 2 cut(s) 272, 870
NmuCI GTSAC 3 cut(s) 74, 938, 1508
NsbI TGCGCA 3 cut(s) 975, 1134, 1144
NspI RCATGY 1 cut(s) 634
PaeI GCATGC 1 cut(s) 634
PagI TCATGA 2 cut(s) 537, 847
PciSI GCTCTTC 1 cut(s) 192
PcsI WCGNNNNNNNCGW 1 cut(s) 274
PctI GAATGC 3 cut(s) 249, 459, 1028
PdmI GAANNNNTTC 2 cut(s) 306, 516
PfeI GAWTC 6 cut(s) 36, 235, 534, 755, 1042, 1544
PfoI TCCNGGA 1 cut(s) 1547
PkrI GCNGC 5 cut(s) 248, 500, 549, 1147, 1474
PleI GAGTC 2 cut(s) 439, 1560
PpsI GAGTC 2 cut(s) 439, 1560
Ppu21I YACGTR 2 cut(s) 1305, 1578
PshAI GACNNNNGTC 1 cut(s) 485
Psp6I CCWGG 4 cut(s) 39, 1269, 1349, 1547
PspEI GGTNACC 1 cut(s) 1508
PspGI CCWGG 4 cut(s) 39, 1269, 1349, 1547
PspN4I GGNNCC 2 cut(s) 272, 870
PspPI GGNCC 2 cut(s) 43, 685
PstNI CAGNNNCTG 2 cut(s) 46, 968
PsuI RGATCY 4 cut(s) 208, 270, 418, 700
RsaI GTAC 4 cut(s) 720, 777, 1489, 1580
RsaNI GTAC 4 cut(s) 719, 776, 1488, 1579
RseI CAYNNNNRTG 3 cut(s) 254, 464, 852
SapI GCTCTTC 1 cut(s) 192
SatI GCNGC 5 cut(s) 247, 499, 548, 1146, 1473
Sau3AI GATC 7 cut(s) 208, 270, 418, 601, 700, 1447, 1557
Sau96I GGNCC 2 cut(s) 43, 685
ScaI AGTACT 2 cut(s) 720, 777
SchI GAGTC 2 cut(s) 439, 1561
ScrFI CCNGG 4 cut(s) 41, 1271, 1351, 1549
SduI GDGCHC 1 cut(s) 716
SfaNI GCATC 1 cut(s) 955
SinI GGWCC 1 cut(s) 685
SmiMI CAYNNNNRTG 3 cut(s) 254, 464, 852
SmlI CTYRAG 2 cut(s) 230, 440
SmoI CTYRAG 2 cut(s) 230, 440
SnaBI TACGTA 1 cut(s) 1578
SphI GCATGC 1 cut(s) 634
SsiI CCGC 3 cut(s) 634, 683, 1541
SspMI CTAG 2 cut(s) 285, 551
StyD4I CCNGG 4 cut(s) 39, 1269, 1349, 1547
StyI CCWWGG 1 cut(s) 1582
TaaI ACNGT 4 cut(s) 80, 1159, 1369, 1487
TaiI ACGT 3 cut(s) 767, 1307, 1580
TaqI TCGA 4 cut(s) 93, 300, 596, 1285
TatI WGTACW 2 cut(s) 718, 775
TfiI GAWTC 6 cut(s) 36, 235, 534, 755, 1042, 1544
TscAI CASTG 3 cut(s) 83, 406, 1372
TseFI GTSAC 3 cut(s) 74, 938, 1508
TseI GCWGC 5 cut(s) 246, 498, 547, 1145, 1472
Tsp45I GTSAC 3 cut(s) 74, 938, 1508
TspGWI ACGGA 1 cut(s) 283
TspRI CASTG 3 cut(s) 83, 406, 1372
Vha464I CTTAAG 2 cut(s) 230, 440
VpaK11BI GGWCC 1 cut(s) 685
XapI RAATTY 4 cut(s) 52, 956, 1323, 1591
XceI RCATGY 1 cut(s) 634
XmnI GAANNNNTTC 2 cut(s) 306, 516
XspI CTAG 2 cut(s) 285, 551
ZrmI AGTACT 2 cut(s) 720, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.