TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 39 - 86 | 3.1e-10 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 366 - 555 | 6.6e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 370 - 431 | 1e-05 | Leucine rich repeat |
| LRR_8 | PF13855 | 400 - 456 | 9.6e-06 | Leucine rich repeat |
| LRR_8 | PF13855 | 643 - 702 | 3e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 666 - 724 | 1e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 834 - 890 | 1.5e-07 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 883 |
| Acc65I | GGTACC | 1 cut(s) | 862 |
| AccB1I | GGYRCC | 1 cut(s) | 862 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 73 |
| AciI | CCGC | 4 cut(s) | 681, 918, 1901, 2745 |
| AclWI | GGATC | 2 cut(s) | 1194, 2586 |
| AcoI | YGGCCR | 1 cut(s) | 78 |
| AcuI | CTGAAG | 3 cut(s) | 162, 338, 498 |
| AcvI | CACGTG | 1 cut(s) | 274 |
| AdeI | CACNNNGTG | 1 cut(s) | 2173 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 73, 1711, 1907 |
| AflIII | ACRYGT | 2 cut(s) | 531, 1746 |
| AjnI | CCWGG | 3 cut(s) | 700, 937, 2487 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 190, 222 |
| AluBI | AGCT | 6 cut(s) | 566, 758, 803, 1241, 1700, 2596 |
| AluI | AGCT | 6 cut(s) | 566, 758, 803, 1241, 1700, 2596 |
| Alw26I | GTCTC | 5 cut(s) | 308, 454, 654, 891, 2659 |
| AlwI | GGATC | 2 cut(s) | 1194, 2586 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 361, 2620, 2678 |
| Ama87I | CYCGRG | 1 cut(s) | 2821 |
| AoxI | GGCC | 6 cut(s) | 78, 580, 682, 919, 1603, 2674 |
| ApeKI | GCWGC | 2 cut(s) | 139, 2227 |
| AseI | ATTAAT | 1 cut(s) | 609 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1104, 1954 |
| Asp718I | GGTACC | 1 cut(s) | 862 |
| AspS9I | GGNCC | 4 cut(s) | 1154, 1201, 2164, 2675 |
| AsuHPI | GGTGA | 5 cut(s) | 658, 895, 1405, 1821, 2615 |
| AsuII | TTCGAA | 1 cut(s) | 2966 |
| AvaI | CYCGRG | 1 cut(s) | 2821 |
| AvaII | GGWCC | 3 cut(s) | 1154, 1201, 2164 |
| BaeGI | GKGCMC | 1 cut(s) | 2786 |
| BanI | GGYRCC | 1 cut(s) | 862 |
| BanII | GRGCYC | 2 cut(s) | 2137, 2828 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1143, 1175 |
| BauI | CACGAG | 1 cut(s) | 2685 |
| BbrPI | CACGTG | 1 cut(s) | 274 |
| BbsI | GAAGAC | 2 cut(s) | 269, 495 |
| BbvCI | CCTCAGC | 1 cut(s) | 2613 |
| BbvI | GCAGC | 2 cut(s) | 126, 2214 |
| BccI | CCATC | 7 cut(s) | 44, 75, 236, 481, 905, 2122, 2548 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 113, 147 |
| BciT130I | CCWGG | 3 cut(s) | 702, 939, 2489 |
| BciVI | GTATCC | 1 cut(s) | 1853 |
| BclI | TGATCA | 1 cut(s) | 2955 |
| BcoDI | GTCTC | 5 cut(s) | 308, 454, 654, 891, 2659 |
| BfmI | CTRYAG | 1 cut(s) | 1236 |
| BfuI | GTATCC | 1 cut(s) | 1853 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 690, 927 |
| BglII | AGATCT | 6 cut(s) | 126, 201, 511, 1423, 1553, 1579 |
| BisI | GCNGC | 4 cut(s) | 140, 682, 919, 2228 |
| BlsI | GCNGC | 4 cut(s) | 141, 683, 920, 2229 |
| BmcAI | AGTACT | 1 cut(s) | 2952 |
| Bme1390I | CCNGG | 3 cut(s) | 702, 939, 2489 |
| Bme18I | GGWCC | 3 cut(s) | 1154, 1201, 2164 |
| BmeT110I | CYCGRG | 1 cut(s) | 2821 |
| BmgT120I | GGNCC | 4 cut(s) | 1154, 1201, 2164, 2675 |
| BmiI | GGNNCC | 1 cut(s) | 864 |
| BmrFI | CCNGG | 3 cut(s) | 702, 939, 2489 |
| BmrI | ACTGGG | 1 cut(s) | 774 |
| BmsI | GCATC | 2 cut(s) | 668, 2214 |
| BmuI | ACTGGG | 1 cut(s) | 774 |
| BpiI | GAAGAC | 2 cut(s) | 269, 495 |
| BpmI | CTGGAG | 2 cut(s) | 1680, 2471 |
| Bpu10I | CCTNAGC | 2 cut(s) | 428, 2613 |
| Bpu14I | TTCGAA | 1 cut(s) | 2966 |
| BpuEI | CTTGAG | 3 cut(s) | 1542, 2425, 2569 |
| BsaAI | YACGTR | 2 cut(s) | 274, 1532 |
| BsaJI | CCNNGG | 8 cut(s) | 422, 636, 858, 1710, 2035, 2048, 2488, 2734 |
| BsaWI | WCCGGW | 1 cut(s) | 1817 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 73, 1711, 1907 |
| Bse1I | ACTGG | 7 cut(s) | 583, 769, 1030, 1157, 2061, 2335, 2625 |
| Bse3DI | GCAATG | 1 cut(s) | 1797 |
| BseBI | CCWGG | 3 cut(s) | 702, 939, 2489 |
| BseDI | CCNNGG | 8 cut(s) | 422, 636, 858, 1710, 2035, 2048, 2488, 2734 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 73, 1711, 1907 |
| BseMI | GCAATG | 1 cut(s) | 1797 |
| BseMII | CTCAG | 6 cut(s) | 442, 768, 2133, 2274, 2627, 2769 |
| BseNI | ACTGG | 7 cut(s) | 583, 769, 1030, 1157, 2061, 2335, 2625 |
| BseSI | GKGCMC | 1 cut(s) | 2786 |
| BseXI | GCAGC | 2 cut(s) | 126, 2214 |
| BseYI | CCCAGC | 1 cut(s) | 799 |
| BshFI | GGCC | 6 cut(s) | 80, 582, 684, 921, 1605, 2676 |
| BshNI | GGYRCC | 1 cut(s) | 862 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2821 |
| BsiSI | CCGG | 1 cut(s) | 1818 |
| BslFI | GGGAC | 3 cut(s) | 455, 1292, 2314 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 73, 1711, 1907 |
| BsmAI | GTCTC | 5 cut(s) | 308, 454, 654, 891, 2659 |
| BsmFI | GGGAC | 3 cut(s) | 455, 1292, 2314 |
| BsnI | GGCC | 6 cut(s) | 80, 582, 684, 921, 1605, 2676 |
| BsoBI | CYCGRG | 1 cut(s) | 2821 |
| Bsp119I | TTCGAA | 1 cut(s) | 2966 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2137, 2786, 2828 |
| Bsp19I | CCATGG | 1 cut(s) | 2035 |
| BspACI | CCGC | 4 cut(s) | 681, 918, 1901, 2745 |
| BspANI | GGCC | 6 cut(s) | 80, 582, 684, 921, 1605, 2676 |
| BspCNI | CTCAG | 6 cut(s) | 441, 767, 2134, 2273, 2626, 2770 |
| BspHI | TCATGA | 1 cut(s) | 2317 |
| BspLI | GGNNCC | 1 cut(s) | 864 |
| BspPI | GGATC | 2 cut(s) | 1194, 2586 |
| BspT104I | TTCGAA | 1 cut(s) | 2966 |
| BspT107I | GGYRCC | 1 cut(s) | 862 |
| BsrDI | GCAATG | 1 cut(s) | 1797 |
| BsrI | ACTGG | 7 cut(s) | 583, 769, 1030, 1157, 2061, 2335, 2625 |
| BssECI | CCNNGG | 8 cut(s) | 422, 636, 858, 1710, 2035, 2048, 2488, 2734 |
| BssSI | CACGAG | 1 cut(s) | 2685 |
| BssT1I | CCWWGG | 6 cut(s) | 422, 636, 1710, 2035, 2048, 2734 |
| Bst2BI | CACGAG | 1 cut(s) | 2685 |
| Bst2UI | CCWGG | 3 cut(s) | 702, 939, 2489 |
| Bst4CI | ACNGT | 6 cut(s) | 31, 492, 625, 862, 1486, 1767 |
| Bst6I | CTCTTC | 1 cut(s) | 211 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 231 |
| BstBAI | YACGTR | 2 cut(s) | 274, 1532 |
| BstBI | TTCGAA | 1 cut(s) | 2966 |
| BstDSI | CCRYGG | 2 cut(s) | 858, 2035 |
| BstMAI | GTCTC | 5 cut(s) | 308, 454, 654, 891, 2659 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 148, 231, 690, 927, 2066 |
| BstNI | CCWGG | 3 cut(s) | 702, 939, 2489 |
| BstNSI | RCATGY | 2 cut(s) | 535, 1750 |
| BstSCI | CCNGG | 3 cut(s) | 700, 937, 2487 |
| BstSFI | CTRYAG | 1 cut(s) | 1236 |
| BstSLI | GKGCMC | 1 cut(s) | 2786 |
| BstV1I | GCAGC | 2 cut(s) | 126, 2214 |
| BstV2I | GAAGAC | 2 cut(s) | 269, 495 |
| BstX2I | RGATCY | 8 cut(s) | 126, 201, 511, 1186, 1423, 1553, 1579, 2578 |
| BstYI | RGATCY | 8 cut(s) | 126, 201, 511, 1186, 1423, 1553, 1579, 2578 |
| BsuI | GTATCC | 1 cut(s) | 1853 |
| BsuRI | GGCC | 6 cut(s) | 80, 582, 684, 921, 1605, 2676 |
| BtgI | CCRYGG | 2 cut(s) | 858, 2035 |
| BtsI | GCAGTG | 1 cut(s) | 1910 |
| BtsIMutI | CAGTG | 5 cut(s) | 762, 1112, 1635, 1910, 2054 |
| CaiI | CAGNNNCTG | 3 cut(s) | 361, 2620, 2678 |
| CciI | TCATGA | 1 cut(s) | 2317 |
| Cfr13I | GGNCC | 4 cut(s) | 1154, 1201, 2164, 2675 |
| CseI | GACGC | 1 cut(s) | 347 |
| DraI | TTTAAA | 3 cut(s) | 715, 952, 2350 |
| DraIII | CACNNNGTG | 1 cut(s) | 2173 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 883 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 883 |
| EaeI | YGGCCR | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 211 |
| EarI | CTCTTC | 1 cut(s) | 211 |
| Eco130I | CCWWGG | 6 cut(s) | 422, 636, 1710, 2035, 2048, 2734 |
| Eco24I | GRGCYC | 2 cut(s) | 2137, 2828 |
| Eco47I | GGWCC | 3 cut(s) | 1154, 1201, 2164 |
| Eco57I | CTGAAG | 3 cut(s) | 162, 338, 498 |
| Eco72I | CACGTG | 1 cut(s) | 274 |
| Eco88I | CYCGRG | 1 cut(s) | 2821 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2675 |
| EcoRI | GAATTC | 1 cut(s) | 2471 |
| EcoRII | CCWGG | 3 cut(s) | 700, 937, 2487 |
| EcoT14I | CCWWGG | 6 cut(s) | 422, 636, 1710, 2035, 2048, 2734 |
| EcoT38I | GRGCYC | 2 cut(s) | 2137, 2828 |
| ErhI | CCWWGG | 6 cut(s) | 422, 636, 1710, 2035, 2048, 2734 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1093, 1125 |
| FaqI | GGGAC | 3 cut(s) | 455, 1292, 2314 |
| FbaI | TGATCA | 1 cut(s) | 2955 |
| Fnu4HI | GCNGC | 4 cut(s) | 140, 682, 919, 2228 |
| FriOI | GRGCYC | 2 cut(s) | 2137, 2828 |
| Fsp4HI | GCNGC | 4 cut(s) | 140, 682, 919, 2228 |
| GluI | GCNGC | 4 cut(s) | 140, 682, 919, 2228 |
| GsaI | CCCAGC | 1 cut(s) | 803 |
| GsuI | CTGGAG | 2 cut(s) | 1680, 2471 |
| HaeIII | GGCC | 6 cut(s) | 80, 582, 684, 921, 1605, 2676 |
| HapII | CCGG | 1 cut(s) | 1818 |
| HgaI | GACGC | 1 cut(s) | 347 |
| HincII | GTYRAC | 1 cut(s) | 1717 |
| HindII | GTYRAC | 1 cut(s) | 1717 |
| HpaI | GTTAAC | 1 cut(s) | 1717 |
| HpaII | CCGG | 1 cut(s) | 1818 |
| HphI | GGTGA | 5 cut(s) | 658, 895, 1405, 1821, 2615 |
| Hpy166II | GTNNAC | 3 cut(s) | 1065, 1376, 1717 |
| Hpy188I | TCNGA | 8 cut(s) | 363, 478, 1150, 1941, 2193, 2223, 2779, 2809 |
| Hpy8I | GTNNAC | 3 cut(s) | 1065, 1376, 1717 |
| HpyCH4III | ACNGT | 6 cut(s) | 31, 492, 625, 862, 1486, 1767 |
| HpyCH4IV | ACGT | 2 cut(s) | 273, 1531 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 148, 231, 690, 927, 2066 |
| HpySE526I | ACGT | 2 cut(s) | 273, 1531 |
| KpnI | GGTACC | 1 cut(s) | 866 |
| Ksp22I | TGATCA | 1 cut(s) | 2955 |
| KspAI | GTTAAC | 1 cut(s) | 1717 |
| LmnI | GCTCC | 1 cut(s) | 1455 |
| Lsp1109I | GCAGC | 2 cut(s) | 126, 2214 |
| LweI | GCATC | 2 cut(s) | 668, 2214 |
| MaeII | ACGT | 2 cut(s) | 273, 1531 |
| MaeIII | GTNAC | 7 cut(s) | 269, 1047, 2021, 2052, 2499, 2531, 2552 |
| MfeI | CAATTG | 1 cut(s) | 54 |
| MflI | RGATCY | 8 cut(s) | 126, 201, 511, 1186, 1423, 1553, 1579, 2578 |
| MhlI | GDGCHC | 3 cut(s) | 2137, 2786, 2828 |
| MlyI | GAGTC | 3 cut(s) | 77, 1936, 2813 |
| MmeI | TCCRAC | 2 cut(s) | 348, 2556 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1104, 1954 |
| MslI | CAYNNNNRTG | 1 cut(s) | 16 |
| MspA1I | CMGCKG | 1 cut(s) | 1700 |
| MspI | CCGG | 1 cut(s) | 1818 |
| MspR9I | CCNGG | 3 cut(s) | 702, 939, 2489 |
| MunI | CAATTG | 1 cut(s) | 54 |
| MvaI | CCWGG | 3 cut(s) | 702, 939, 2489 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 148, 231, 690, 927, 2066 |
| NcoI | CCATGG | 1 cut(s) | 2035 |
| NlaIV | GGNNCC | 1 cut(s) | 864 |
| NmuCI | GTSAC | 6 cut(s) | 269, 1047, 2021, 2052, 2499, 2531 |
| NspI | RCATGY | 2 cut(s) | 535, 1750 |
| NspV | TTCGAA | 1 cut(s) | 2966 |
| PagI | TCATGA | 1 cut(s) | 2317 |
| PciI | ACATGT | 2 cut(s) | 531, 1746 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1104, 1954 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 73 |
| PkrI | GCNGC | 4 cut(s) | 141, 683, 920, 2229 |
| PleI | GAGTC | 3 cut(s) | 77, 1935, 2813 |
| PmaCI | CACGTG | 1 cut(s) | 274 |
| PmlI | CACGTG | 1 cut(s) | 274 |
| PpsI | GAGTC | 3 cut(s) | 77, 1935, 2813 |
| Ppu21I | YACGTR | 2 cut(s) | 274, 1532 |
| PscI | ACATGT | 2 cut(s) | 531, 1746 |
| PshBI | ATTAAT | 1 cut(s) | 609 |
| Psp6I | CCWGG | 3 cut(s) | 700, 937, 2487 |
| PspCI | CACGTG | 1 cut(s) | 274 |
| PspFI | CCCAGC | 1 cut(s) | 799 |
| PspGI | CCWGG | 3 cut(s) | 700, 937, 2487 |
| PspN4I | GGNNCC | 1 cut(s) | 864 |
| PspPI | GGNCC | 4 cut(s) | 1154, 1201, 2164, 2675 |
| PstNI | CAGNNNCTG | 3 cut(s) | 361, 2620, 2678 |
| PsuI | RGATCY | 8 cut(s) | 126, 201, 511, 1186, 1423, 1553, 1579, 2578 |
| PvuII | CAGCTG | 1 cut(s) | 1700 |
| RseI | CAYNNNNRTG | 1 cut(s) | 16 |
| SatI | GCNGC | 4 cut(s) | 140, 682, 919, 2228 |
| Sau96I | GGNCC | 4 cut(s) | 1154, 1201, 2164, 2675 |
| ScaI | AGTACT | 1 cut(s) | 2952 |
| SchI | GAGTC | 3 cut(s) | 77, 1936, 2813 |
| ScrFI | CCNGG | 3 cut(s) | 702, 939, 2489 |
| SduI | GDGCHC | 3 cut(s) | 2137, 2786, 2828 |
| SfaNI | GCATC | 2 cut(s) | 668, 2214 |
| SfcI | CTRYAG | 1 cut(s) | 1236 |
| SfuI | TTCGAA | 1 cut(s) | 2966 |
| SinI | GGWCC | 3 cut(s) | 1154, 1201, 2164 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 16 |
| SmlI | CTYRAG | 3 cut(s) | 1557, 2440, 2548 |
| SmoI | CTYRAG | 3 cut(s) | 1557, 2440, 2548 |
| SsiI | CCGC | 4 cut(s) | 681, 918, 1901, 2745 |
| StyD4I | CCNGG | 3 cut(s) | 700, 937, 2487 |
| StyI | CCWWGG | 6 cut(s) | 422, 636, 1710, 2035, 2048, 2734 |
| TaaI | ACNGT | 6 cut(s) | 31, 492, 625, 862, 1486, 1767 |
| TaiI | ACGT | 2 cut(s) | 276, 1534 |
| TaqI | TCGA | 2 cut(s) | 2413, 2966 |
| TatI | WGTACW | 2 cut(s) | 1486, 2950 |
| TauI | GCSGC | 2 cut(s) | 684, 921 |
| TscAI | CASTG | 5 cut(s) | 769, 1119, 1642, 1910, 2061 |
| TseFI | GTSAC | 6 cut(s) | 269, 1047, 2021, 2052, 2499, 2531 |
| TseI | GCWGC | 2 cut(s) | 139, 2227 |
| Tsp45I | GTSAC | 6 cut(s) | 269, 1047, 2021, 2052, 2499, 2531 |
| TspRI | CASTG | 5 cut(s) | 769, 1119, 1642, 1910, 2061 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 73 |
| VpaK11BI | GGWCC | 3 cut(s) | 1154, 1201, 2164 |
| VspI | ATTAAT | 1 cut(s) | 609 |
| XbaI | TCTAGA | 3 cut(s) | 1420, 1441, 1460 |
| XceI | RCATGY | 2 cut(s) | 535, 1750 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1620 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1104, 1954 |
| ZrmI | AGTACT | 1 cut(s) | 2952 |