Rh1CG380900
WRKY Family

WRKY Transcription Factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000067
Physical Location & Seq
Forward (+)
65069091 .. 65071388
2298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG380900.1

Sequence Viewer

Length: 1350 bp
ATGAATCGACTTCGTTGTTTATCACATCTTGAATTAGAAGCGTGCAAGAAACTGAAATCAATACCTGAGCTTTCATCAAGTATTAGTTACATAGATGCACATGATTGCACAGCTTTGGAAACAGTTTCAACACCAAAGCCTCGCTCTTTTACAAATCTCTGCTTCACATTTTCAAATTGTCTCCAGCTGATACAAACAAATCTATTCAGGGATATTGTGGAAACTCATTCACATTATCAGGGTAGCTATCTACGACCTCTTTCCTTTAGTATGTCACTTCCTGGAAGTGAAATTCCTCATTGGTTCAACCATCAGAGTGAGGGATTCTCAGTGACTGTGCAGCTACCACAGAATTGGTTCGATGATAAGTTTTTGGGATTTGCTATATGCGGTGTTAGTAACTTCAAGGGTGCTCATAATGATGCATCCGATCTATCTGCTGTTTGTTTTTGTACCTTCAAAGGAAATCATGGTGAGTACAAGTTCAGTTTTCATTTGCTTGATTGGGGTTTCAGAACAAACAGATACCTCCAGTCGGATCACATGTTCCTGGGATATGTGCCATGGTCACAATATCGCTTCAGTGATGAAGGGAAGCAGGTCAATGAACGCTACTACACTGAAGTCAGATTTGAGATTGTGGTAGAAAATGGAGTCTATGCACATGATGATTACAGGACAGTAATACGACGACATTGCATCACAAGTTGCGGAGTGCGTTTGTTTCATGGTAAGTATATGGGACTGCAAAATCTAAGCATCACTCAGCCTAATTCTCATCATGATGGCTTTGGAATCCCATTGGACACTGCGAGGAAGAGAAAGAGAGATATAGCAGGGGTGACATTGCAGTGGGAGTGGCCTCCCGCAGAAGAGGTGTTCACTGAGCAAGAGCAAGAAGGATCCCCATCAAGGGAAGGGTCCCTGGCGGGGGAAGGGTCCTCTGCGGGCAAGAGGTCCTCGGCGGGGGAAGGGGTTCCTTCTATTCTTACTGCAGTAGCAACAGTAGAAAGTGGTGCCAATGAACGTGATGGTCCAACTATCCCTAATCGTACTAACAGAAGAAGGCGCACAAATTTGCGAAATTCGGCAACGTGGATCCGAGATACAAATCAACTTATTGATGACGGCCATGCTTGGAGAAAGTATGGCCAAAAGGAGATACTTGGATCCAGATATCCCAGAAACTATTACAGATGCACTTATCGAATGGATCAAGGCTGTATGGCCACTAAGCACGTGCAACGCATCAGTGACGAGCCAGTATTATATAGAACTACTTACAGAGGAAATCACACATGCAGACCCGTCTCCAGCATACAGGACATAGAAGAGTATTTGGCATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WRKY

Protein Analysis

449

Amino Acids

51.49

Weight (kDa)

7.92

Isoelectric Point (pI)

42.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 93 - 243 4.5e-22 C-JID domain
WRKY PF03106 375 - 434 1.7e-24 WRKY DNA -binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 589
AccB1I GGYRCC 1 cut(s) 1016
AciI CCGC 6 cut(s) 390, 711, 867, 929, 947, 965
AclWI GGATC 8 cut(s) 546, 897, 910, 1093, 1106, 1164, 1177, 1221
AcoI YGGCCR 3 cut(s) 1129, 1150, 1227
AcsI RAATTY 3 cut(s) 291, 1075, 1084
AcuI CTGAAG 2 cut(s) 565, 642
AcvI CACGTG 1 cut(s) 1240
AfaI GTAC 3 cut(s) 454, 479, 1054
AfiI CCNNNNNNNGG 6 cut(s) 535, 912, 913, 930, 931, 966
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 6 cut(s) 32, 129, 174, 307, 406, 460
AjnI CCWGG 3 cut(s) 280, 549, 924
AloI GAACNNNNNNTCC 2 cut(s) 530, 562
AluBI AGCT 5 cut(s) 70, 113, 187, 246, 343
AluI AGCT 5 cut(s) 70, 113, 187, 246, 343
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 2 cut(s) 185, 1315
AlwI GGATC 8 cut(s) 546, 897, 910, 1093, 1106, 1164, 1177, 1221
AlwNI CAGNNNCTG 1 cut(s) 335
AoxI GGCC 4 cut(s) 860, 1129, 1150, 1227
ApeKI GCWGC 1 cut(s) 340
ApoI RAATTY 3 cut(s) 291, 1075, 1084
Asp700I GAANNNNTTC 2 cut(s) 356, 975
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 4 cut(s) 921, 939, 957, 1034
AsuHPI GGTGA 2 cut(s) 485, 853
AvaII GGWCC 4 cut(s) 921, 939, 957, 1034
BalI TGGCCA 2 cut(s) 1152, 1229
BamHI GGATCC 3 cut(s) 902, 1098, 1169
BanI GGYRCC 1 cut(s) 1016
BbrPI CACGTG 1 cut(s) 1240
Bbv12I GWGCWC 1 cut(s) 415
BbvI GCAGC 1 cut(s) 352
BccI CCATC 4 cut(s) 318, 779, 916, 1025
BceAI ACGGC 1 cut(s) 1144
BcgI CGANNNNNNTGC 4 cut(s) 419, 453, 678, 712
BciT130I CCWGG 3 cut(s) 282, 551, 926
BcoDI GTCTC 2 cut(s) 185, 1315
BfmI CTRYAG 1 cut(s) 993
BfuAI ACCTGC 1 cut(s) 589
BisI GCNGC 1 cut(s) 341
BlsI GCNGC 1 cut(s) 342
Bme1390I CCNGG 3 cut(s) 282, 551, 926
Bme18I GGWCC 4 cut(s) 921, 939, 957, 1034
BmgT120I GGNCC 4 cut(s) 921, 939, 957, 1034
BmiI GGNNCC 8 cut(s) 904, 922, 923, 940, 978, 1018, 1100, 1171
BmrFI CCNGG 3 cut(s) 282, 551, 926
BmsI GCATC 7 cut(s) 85, 412, 434, 708, 768, 1187, 1257
BplI GAGNNNNNCTC 2 cut(s) 311, 343
BpmI CTGGAG 3 cut(s) 167, 515, 1297
Bpu10I CCTNAGC 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 1240
BsaBI GATNNNNATC 2 cut(s) 907, 1110
BsaJI CCNNGG 4 cut(s) 550, 563, 924, 960
Bsc4I CCNNNNNNNGG 6 cut(s) 535, 912, 913, 930, 931, 966
Bse1I ACTGG 2 cut(s) 532, 1262
Bse3DI GCAATG 2 cut(s) 694, 845
Bse8I GATNNNNATC 2 cut(s) 907, 1110
BseBI CCWGG 3 cut(s) 282, 551, 926
BseDI CCNNGG 4 cut(s) 550, 563, 924, 960
BseGI GGATG 1 cut(s) 425
BseJI GATNNNNATC 2 cut(s) 907, 1110
BseLI CCNNNNNNNGG 6 cut(s) 535, 912, 913, 930, 931, 966
BseMI GCAATG 2 cut(s) 694, 845
BseMII CTCAG 4 cut(s) 57, 342, 779, 876
BseNI ACTGG 2 cut(s) 532, 1262
BseXI GCAGC 1 cut(s) 352
BsgI GTGCAG 1 cut(s) 359
BshFI GGCC 4 cut(s) 862, 1131, 1152, 1229
BshNI GGYRCC 1 cut(s) 1016
BsiHKAI GWGCWC 1 cut(s) 415
BslFI GGGAC 2 cut(s) 756, 907
BslI CCNNNNNNNGG 6 cut(s) 535, 912, 913, 930, 931, 966
BsmAI GTCTC 2 cut(s) 185, 1315
BsmBI CGTCTC 1 cut(s) 1315
BsmFI GGGAC 2 cut(s) 756, 907
BsnI GGCC 4 cut(s) 862, 1131, 1152, 1229
Bsp1286I GDGCHC 1 cut(s) 415
Bsp143I GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
Bsp19I CCATGG 1 cut(s) 563
BspACI CCGC 6 cut(s) 390, 711, 867, 929, 947, 965
BspANI GGCC 4 cut(s) 862, 1131, 1152, 1229
BspCNI CTCAG 4 cut(s) 58, 341, 778, 877
BspHI TCATGA 1 cut(s) 781
BspLI GGNNCC 8 cut(s) 904, 922, 923, 940, 978, 1018, 1100, 1171
BspMAI CTGCAG 1 cut(s) 997
BspMI ACCTGC 1 cut(s) 589
BspPI GGATC 8 cut(s) 546, 897, 910, 1093, 1106, 1164, 1177, 1221
BspT107I GGYRCC 1 cut(s) 1016
BsrDI GCAATG 2 cut(s) 694, 845
BsrI ACTGG 2 cut(s) 532, 1262
BssECI CCNNGG 4 cut(s) 550, 563, 924, 960
BssMI GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
BssT1I CCWWGG 1 cut(s) 563
Bst2UI CCWGG 3 cut(s) 282, 551, 926
Bst4CI ACNGT 4 cut(s) 124, 337, 682, 1006
Bst6I CTCTTC 3 cut(s) 812, 867, 1326
BstBAI YACGTR 1 cut(s) 1240
BstC8I GCNNGC 2 cut(s) 43, 949
BstDEI CTNAG 6 cut(s) 66, 328, 755, 765, 885, 1233
BstDSI CCRYGG 1 cut(s) 563
BstF5I GGATG 1 cut(s) 425
BstHHI GCGC 1 cut(s) 1071
BstKTI GATC 6 cut(s) 433, 541, 905, 1101, 1172, 1216
BstMAI GTCTC 2 cut(s) 185, 1315
BstMBI GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
BstNI CCWGG 3 cut(s) 282, 551, 926
BstNSI RCATGY 2 cut(s) 547, 1302
BstSCI CCNGG 3 cut(s) 280, 549, 924
BstSFI CTRYAG 1 cut(s) 993
BstV1I GCAGC 1 cut(s) 352
BstX2I RGATCY 3 cut(s) 902, 1098, 1169
BstXI CCANNNNNNTGG 1 cut(s) 354
BstYI RGATCY 3 cut(s) 902, 1098, 1169
BsuRI GGCC 4 cut(s) 862, 1131, 1152, 1229
BtgI CCRYGG 1 cut(s) 563
BtsCI GGATG 1 cut(s) 425
BtsI GCAGTG 2 cut(s) 807, 857
BtsIMutI CAGTG 7 cut(s) 336, 589, 618, 807, 857, 882, 1258
BveI ACCTGC 1 cut(s) 589
Cac8I GCNNGC 2 cut(s) 43, 949
CaiI CAGNNNCTG 1 cut(s) 335
CciI TCATGA 1 cut(s) 781
CfoI GCGC 1 cut(s) 1071
Cfr13I GGNCC 4 cut(s) 921, 939, 957, 1034
Csp6I GTAC 3 cut(s) 453, 478, 1053
CviAII CATG 9 cut(s) 101, 470, 544, 564, 665, 728, 782, 1133, 1299
CviQI GTAC 3 cut(s) 453, 478, 1053
DdeI CTNAG 6 cut(s) 66, 328, 755, 765, 885, 1233
DpnI GATC 6 cut(s) 432, 540, 904, 1100, 1171, 1215
DpnII GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
EaeI YGGCCR 3 cut(s) 1129, 1150, 1227
Eam1104I CTCTTC 3 cut(s) 812, 867, 1326
EarI CTCTTC 3 cut(s) 812, 867, 1326
Eco130I CCWWGG 1 cut(s) 563
Eco32I GATATC 1 cut(s) 1178
Eco47I GGWCC 4 cut(s) 921, 939, 957, 1034
Eco57I CTGAAG 2 cut(s) 565, 642
Eco72I CACGTG 1 cut(s) 1240
EcoO109I RGGNCCY 3 cut(s) 921, 939, 957
EcoRII CCWGG 3 cut(s) 280, 549, 924
EcoRV GATATC 1 cut(s) 1178
EcoT14I CCWWGG 1 cut(s) 563
EcoT22I ATGCAT 1 cut(s) 427
ErhI CCWWGG 1 cut(s) 563
Esp3I CGTCTC 1 cut(s) 1315
FaeI CATG 9 cut(s) 104, 473, 547, 567, 668, 731, 785, 1136, 1302
FaqI GGGAC 2 cut(s) 756, 907
FatI CATG 9 cut(s) 100, 469, 543, 563, 664, 727, 781, 1132, 1298
FauI CCCGC 4 cut(s) 874, 922, 940, 958
Fnu4HI GCNGC 1 cut(s) 341
FokI GGATG 1 cut(s) 412
Fsp4HI GCNGC 1 cut(s) 341
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 1 cut(s) 341
GsuI CTGGAG 3 cut(s) 167, 515, 1297
HaeIII GGCC 4 cut(s) 862, 1131, 1152, 1229
HhaI GCGC 1 cut(s) 1071
Hin1II CATG 9 cut(s) 104, 473, 547, 567, 668, 731, 785, 1136, 1302
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HinfI GANTC 4 cut(s) 4, 324, 654, 795
HphI GGTGA 2 cut(s) 485, 853
Hpy166II GTNNAC 1 cut(s) 882
Hpy188I TCNGA 6 cut(s) 315, 430, 515, 538, 629, 1103
Hpy188III TCNNGA 3 cut(s) 29, 782, 1173
Hpy8I GTNNAC 1 cut(s) 882
Hpy99I CGWCG 1 cut(s) 693
HpyAV CCTTC 8 cut(s) 466, 584, 893, 911, 929, 965, 990, 1059
HpyCH4III ACNGT 4 cut(s) 124, 337, 682, 1006
HpyCH4IV ACGT 3 cut(s) 1027, 1094, 1239
HpyF3I CTNAG 6 cut(s) 66, 328, 755, 765, 885, 1233
HpySE526I ACGT 3 cut(s) 1027, 1094, 1239
Hsp92II CATG 9 cut(s) 104, 473, 547, 567, 668, 731, 785, 1136, 1302
HspAI GCGC 1 cut(s) 1069
KflI GGGWCCC 1 cut(s) 921
Kzo9I GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
Lsp1109I GCAGC 1 cut(s) 352
LweI GCATC 7 cut(s) 85, 412, 434, 708, 768, 1187, 1257
MaeII ACGT 3 cut(s) 1027, 1094, 1239
MaeIII GTNAC 7 cut(s) 86, 273, 331, 398, 567, 841, 1253
MalI GATC 6 cut(s) 432, 540, 904, 1100, 1171, 1215
MboI GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
MboII GAAGA 4 cut(s) 829, 884, 1074, 1343
MflI RGATCY 3 cut(s) 902, 1098, 1169
MhlI GDGCHC 1 cut(s) 415
MlsI TGGCCA 2 cut(s) 1152, 1229
MluCI AATT 7 cut(s) 32, 175, 291, 352, 772, 1075, 1084
MluNI TGGCCA 2 cut(s) 1152, 1229
MlyI GAGTC 1 cut(s) 663
MmeI TCCRAC 2 cut(s) 516, 1061
Mox20I TGGCCA 2 cut(s) 1152, 1229
Mph1103I ATGCAT 1 cut(s) 427
MroXI GAANNNNTTC 2 cut(s) 356, 975
MscI TGGCCA 2 cut(s) 1152, 1229
MseI TTAA 1 cut(s) 1348
MslI CAYNNNNRTG 4 cut(s) 315, 420, 783, 850
Msp20I TGGCCA 2 cut(s) 1152, 1229
MspA1I CMGCKG 1 cut(s) 187
MspR9I CCNGG 3 cut(s) 282, 551, 926
MvaI CCWGG 3 cut(s) 282, 551, 926
NcoI CCATGG 1 cut(s) 563
NdeII GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
NlaIII CATG 9 cut(s) 104, 473, 547, 567, 668, 731, 785, 1136, 1302
NlaIV GGNNCC 8 cut(s) 904, 922, 923, 940, 978, 1018, 1100, 1171
NmeAIII GCCGAG 1 cut(s) 941
NmuCI GTSAC 5 cut(s) 273, 331, 567, 841, 1253
NsiI ATGCAT 1 cut(s) 427
NspI RCATGY 2 cut(s) 547, 1302
PagI TCATGA 1 cut(s) 781
PciI ACATGT 1 cut(s) 543
PdmI GAANNNNTTC 2 cut(s) 356, 975
PfeI GAWTC 3 cut(s) 4, 324, 795
PfoI TCCNGGA 1 cut(s) 280
PkrI GCNGC 1 cut(s) 342
PleI GAGTC 1 cut(s) 662
PmaCI CACGTG 1 cut(s) 1240
PmlI CACGTG 1 cut(s) 1240
PpsI GAGTC 1 cut(s) 662
Ppu21I YACGTR 1 cut(s) 1240
PpuMI RGGWCCY 3 cut(s) 921, 939, 957
PscI ACATGT 1 cut(s) 543
Psp5II RGGWCCY 3 cut(s) 921, 939, 957
Psp6I CCWGG 3 cut(s) 280, 549, 924
PspCI CACGTG 1 cut(s) 1240
PspGI CCWGG 3 cut(s) 280, 549, 924
PspN4I GGNNCC 8 cut(s) 904, 922, 923, 940, 978, 1018, 1100, 1171
PspPI GGNCC 4 cut(s) 921, 939, 957, 1034
PspPPI RGGWCCY 3 cut(s) 921, 939, 957
PstI CTGCAG 1 cut(s) 997
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 3 cut(s) 902, 1098, 1169
PvuII CAGCTG 1 cut(s) 187
RsaI GTAC 3 cut(s) 454, 479, 1054
RsaNI GTAC 3 cut(s) 453, 478, 1053
RseI CAYNNNNRTG 4 cut(s) 315, 420, 783, 850
SaqAI TTAA 1 cut(s) 1348
SatI GCNGC 1 cut(s) 341
Sau3AI GATC 6 cut(s) 430, 538, 902, 1098, 1169, 1213
Sau96I GGNCC 4 cut(s) 921, 939, 957, 1034
SchI GAGTC 1 cut(s) 663
ScrFI CCNGG 3 cut(s) 282, 551, 926
SduI GDGCHC 1 cut(s) 415
SfaNI GCATC 7 cut(s) 85, 412, 434, 708, 768, 1187, 1257
SfcI CTRYAG 1 cut(s) 993
SinI GGWCC 4 cut(s) 921, 939, 957, 1034
SmiMI CAYNNNNRTG 4 cut(s) 315, 420, 783, 850
Sse9I AATT 7 cut(s) 32, 175, 291, 352, 772, 1075, 1084
SsiI CCGC 6 cut(s) 390, 711, 867, 929, 947, 965
StyD4I CCNGG 3 cut(s) 280, 549, 924
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 4 cut(s) 124, 337, 682, 1006
TaiI ACGT 3 cut(s) 1030, 1097, 1242
TaqI TCGA 3 cut(s) 7, 360, 1207
TasI AATT 7 cut(s) 32, 175, 291, 352, 772, 1075, 1084
TatI WGTACW 1 cut(s) 477
TfiI GAWTC 3 cut(s) 4, 324, 795
Tru1I TTAA 1 cut(s) 1348
Tru9I TTAA 1 cut(s) 1348
TscAI CASTG 7 cut(s) 336, 589, 625, 814, 857, 889, 1258
TseFI GTSAC 5 cut(s) 273, 331, 567, 841, 1253
TseI GCWGC 1 cut(s) 340
Tsp45I GTSAC 5 cut(s) 273, 331, 567, 841, 1253
TspDTI ATGAA 7 cut(s) 17, 63, 482, 603, 621, 716, 1038
TspRI CASTG 7 cut(s) 336, 589, 625, 814, 857, 889, 1258
VpaK11BI GGWCC 4 cut(s) 921, 939, 957, 1034
XapI RAATTY 3 cut(s) 291, 1075, 1084
XceI RCATGY 2 cut(s) 547, 1302
XmnI GAANNNNTTC 2 cut(s) 356, 975
Zsp2I ATGCAT 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.