TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 188 | 7.1e-51 | TIR domain |
| TIR_2 | PF13676 | 16 - 111 | 1.2e-15 | TIR domain |
| NB-ARC | PF00931 | 194 - 360 | 8.2e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 432 - 501 | 5.8e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 645 - 758 | 2e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 702 - 787 | 1.7e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 730 - 796 | 7.6e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 971 |
| AccB1I | GGYRCC | 2 cut(s) | 307, 2443 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 274 |
| AccI | GTMKAC | 1 cut(s) | 402 |
| AccIII | TCCGGA | 2 cut(s) | 2021, 2293 |
| AciI | CCGC | 2 cut(s) | 390, 2457 |
| AclWI | GGATC | 4 cut(s) | 323, 529, 1508, 2443 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 7 cut(s) | 594, 788, 801, 876, 1249, 1822, 2380 |
| AcuI | CTGAAG | 2 cut(s) | 1925, 2489 |
| AfaI | GTAC | 7 cut(s) | 774, 1447, 1629, 1809, 1830, 1921, 2589 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 274, 947, 1394, 2432, 2453, 2494 |
| AflII | CTTAAG | 1 cut(s) | 350 |
| AflIII | ACRYGT | 2 cut(s) | 74, 1630 |
| AjiI | CACGTC | 1 cut(s) | 1236 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1190, 1222, 2477, 2509 |
| AleI | CACNNNNGTG | 1 cut(s) | 79 |
| Alw21I | GWGCWC | 2 cut(s) | 124, 2348 |
| Alw26I | GTCTC | 5 cut(s) | 1242, 1385, 1425, 1438, 1657 |
| AlwI | GGATC | 4 cut(s) | 323, 529, 1508, 2443 |
| Ama87I | CYCGRG | 2 cut(s) | 199, 1388 |
| Aor13HI | TCCGGA | 2 cut(s) | 2021, 2293 |
| AoxI | GGCC | 2 cut(s) | 3, 2458 |
| ApeKI | GCWGC | 3 cut(s) | 504, 1989, 2130 |
| ApoI | RAATTY | 7 cut(s) | 594, 788, 801, 876, 1249, 1822, 2380 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1334, 1366 |
| AseI | ATTAAT | 3 cut(s) | 2091, 2232, 2429 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 577, 789 |
| AspLEI | GCGC | 1 cut(s) | 1130 |
| AspS9I | GGNCC | 4 cut(s) | 265, 910, 1978, 2459 |
| AsuC2I | CCSGG | 2 cut(s) | 1518, 2395 |
| AsuHPI | GGTGA | 3 cut(s) | 537, 1931, 2415 |
| AvaI | CYCGRG | 2 cut(s) | 199, 1388 |
| AvaII | GGWCC | 3 cut(s) | 265, 910, 1978 |
| BaeGI | GKGCMC | 2 cut(s) | 312, 2082 |
| BanI | GGYRCC | 2 cut(s) | 307, 2443 |
| BanII | GRGCYC | 1 cut(s) | 1020 |
| BbsI | GAAGAC | 5 cut(s) | 75, 522, 1044, 1130, 2282 |
| Bbv12I | GWGCWC | 2 cut(s) | 124, 2348 |
| BbvI | GCAGC | 3 cut(s) | 516, 1976, 2117 |
| BccI | CCATC | 9 cut(s) | 102, 554, 827, 1274, 1951, 2051, 2164, 2392, 2578 |
| BclI | TGATCA | 1 cut(s) | 2251 |
| BcnI | CCSGG | 2 cut(s) | 1518, 2395 |
| BcoDI | GTCTC | 5 cut(s) | 1242, 1385, 1425, 1438, 1657 |
| BfaI | CTAG | 6 cut(s) | 681, 978, 995, 1313, 1451, 1604 |
| BfmI | CTRYAG | 2 cut(s) | 2272, 2583 |
| BfrI | CTTAAG | 1 cut(s) | 350 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2127 |
| BglII | AGATCT | 2 cut(s) | 270, 2540 |
| BisI | GCNGC | 4 cut(s) | 505, 1990, 2131, 2458 |
| BlsI | GCNGC | 4 cut(s) | 506, 1991, 2132, 2459 |
| BmcAI | AGTACT | 1 cut(s) | 2589 |
| Bme1390I | CCNGG | 2 cut(s) | 1518, 2395 |
| Bme18I | GGWCC | 3 cut(s) | 265, 910, 1978 |
| BmeT110I | CYCGRG | 2 cut(s) | 199, 1388 |
| BmgBI | CACGTC | 1 cut(s) | 1236 |
| BmgT120I | GGNCC | 4 cut(s) | 265, 910, 1978, 2459 |
| BmiI | GGNNCC | 4 cut(s) | 309, 394, 2388, 2445 |
| BmrFI | CCNGG | 2 cut(s) | 1518, 2395 |
| BmrI | ACTGGG | 2 cut(s) | 872, 2349 |
| BmsI | GCATC | 5 cut(s) | 245, 669, 1090, 1446, 2454 |
| BmuI | ACTGGG | 2 cut(s) | 872, 2349 |
| BpiI | GAAGAC | 5 cut(s) | 75, 522, 1044, 1130, 2282 |
| BpmI | CTGGAG | 3 cut(s) | 45, 1661, 2129 |
| BpuEI | CTTGAG | 4 cut(s) | 1093, 1916, 1985, 2162 |
| BpuMI | CCSGG | 2 cut(s) | 1518, 2395 |
| Bsa29I | ATCGAT | 1 cut(s) | 1836 |
| BsaAI | YACGTR | 3 cut(s) | 77, 1633, 2244 |
| BsaBI | GATNNNNATC | 1 cut(s) | 539 |
| BsaI | GGTCTC | 1 cut(s) | 1425 |
| BsaWI | WCCGGW | 3 cut(s) | 1189, 2021, 2293 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 274, 947, 1394, 2432, 2453, 2494 |
| Bse118I | RCCGGY | 1 cut(s) | 5 |
| Bse1I | ACTGG | 5 cut(s) | 267, 471, 867, 1399, 2344 |
| Bse8I | GATNNNNATC | 1 cut(s) | 539 |
| BseAI | TCCGGA | 2 cut(s) | 2021, 2293 |
| BseCI | ATCGAT | 1 cut(s) | 1836 |
| BseGI | GGATG | 6 cut(s) | 490, 628, 1007, 1943, 2175, 2403 |
| BseJI | GATNNNNATC | 1 cut(s) | 539 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 274, 947, 1394, 2432, 2453, 2494 |
| BseMII | CTCAG | 3 cut(s) | 1872, 2358, 2591 |
| BseNI | ACTGG | 5 cut(s) | 267, 471, 867, 1399, 2344 |
| BseRI | GAGGAG | 2 cut(s) | 1675, 2159 |
| BseSI | GKGCMC | 2 cut(s) | 312, 2082 |
| BseXI | GCAGC | 3 cut(s) | 516, 1976, 2117 |
| BseYI | CCCAGC | 3 cut(s) | 462, 492, 613 |
| BsgI | GTGCAG | 2 cut(s) | 789, 1137 |
| BshFI | GGCC | 2 cut(s) | 5, 2460 |
| BshNI | GGYRCC | 2 cut(s) | 307, 2443 |
| BshVI | ATCGAT | 1 cut(s) | 1836 |
| BsiHKAI | GWGCWC | 2 cut(s) | 124, 2348 |
| BsiHKCI | CYCGRG | 2 cut(s) | 199, 1388 |
| BsiSI | CCGG | 6 cut(s) | 6, 1190, 1517, 2022, 2294, 2394 |
| BslFI | GGGAC | 3 cut(s) | 1499, 2074, 2215 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 274, 947, 1394, 2432, 2453, 2494 |
| BsmAI | GTCTC | 5 cut(s) | 1242, 1385, 1425, 1438, 1657 |
| BsmBI | CGTCTC | 1 cut(s) | 1242 |
| BsmFI | GGGAC | 3 cut(s) | 1499, 2074, 2215 |
| BsnI | GGCC | 2 cut(s) | 5, 2460 |
| Bso31I | GGTCTC | 1 cut(s) | 1425 |
| BsoBI | CYCGRG | 2 cut(s) | 199, 1388 |
| Bsp1286I | GDGCHC | 5 cut(s) | 124, 312, 1020, 2082, 2348 |
| Bsp13I | TCCGGA | 2 cut(s) | 2021, 2293 |
| Bsp1407I | TGTACA | 2 cut(s) | 1807, 1919 |
| BspACI | CCGC | 2 cut(s) | 390, 2457 |
| BspANI | GGCC | 2 cut(s) | 5, 2460 |
| BspCNI | CTCAG | 3 cut(s) | 1873, 2359, 2592 |
| BspDI | ATCGAT | 1 cut(s) | 1836 |
| BspEI | TCCGGA | 2 cut(s) | 2021, 2293 |
| BspHI | TCATGA | 2 cut(s) | 1366, 1543 |
| BspLI | GGNNCC | 4 cut(s) | 309, 394, 2388, 2445 |
| BspMAI | CTGCAG | 1 cut(s) | 2276 |
| BspPI | GGATC | 4 cut(s) | 323, 529, 1508, 2443 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 2 cut(s) | 307, 2443 |
| BspTI | CTTAAG | 1 cut(s) | 350 |
| BspTNI | GGTCTC | 1 cut(s) | 1425 |
| BsrFI | RCCGGY | 1 cut(s) | 5 |
| BsrGI | TGTACA | 2 cut(s) | 1807, 1919 |
| BsrI | ACTGG | 5 cut(s) | 267, 471, 867, 1399, 2344 |
| BssAI | RCCGGY | 1 cut(s) | 5 |
| Bst4CI | ACNGT | 3 cut(s) | 1432, 2584, 2592 |
| Bst6I | CTCTTC | 2 cut(s) | 141, 405 |
| BstAFI | CTTAAG | 1 cut(s) | 350 |
| BstAUI | TGTACA | 2 cut(s) | 1807, 1919 |
| BstBAI | YACGTR | 3 cut(s) | 77, 1633, 2244 |
| BstC8I | GCNNGC | 4 cut(s) | 1273, 2128, 2527, 2531 |
| BstDEI | CTNAG | 8 cut(s) | 152, 1581, 1881, 2039, 2053, 2349, 2367, 2600 |
| BstF5I | GGATG | 6 cut(s) | 490, 628, 1007, 1943, 2175, 2403 |
| BstHHI | GCGC | 1 cut(s) | 1130 |
| BstMAI | GTCTC | 5 cut(s) | 1242, 1385, 1425, 1438, 1657 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 610, 1678, 2127 |
| BstNSI | RCATGY | 1 cut(s) | 1326 |
| BstSCI | CCNGG | 2 cut(s) | 1516, 2393 |
| BstSFI | CTRYAG | 2 cut(s) | 2272, 2583 |
| BstSLI | GKGCMC | 2 cut(s) | 312, 2082 |
| BstV1I | GCAGC | 3 cut(s) | 516, 1976, 2117 |
| BstV2I | GAAGAC | 5 cut(s) | 75, 522, 1044, 1130, 2282 |
| BstX2I | RGATCY | 4 cut(s) | 270, 328, 1513, 2540 |
| BstYI | RGATCY | 4 cut(s) | 270, 328, 1513, 2540 |
| Bsu15I | ATCGAT | 1 cut(s) | 1836 |
| BsuRI | GGCC | 2 cut(s) | 5, 2460 |
| BsuTUI | ATCGAT | 1 cut(s) | 1836 |
| BtrI | CACGTC | 1 cut(s) | 1236 |
| BtsCI | GGATG | 6 cut(s) | 490, 628, 1007, 1943, 2175, 2403 |
| BtsIMutI | CAGTG | 2 cut(s) | 1878, 2580 |
| Cac8I | GCNNGC | 4 cut(s) | 1273, 2128, 2527, 2531 |
| CciI | TCATGA | 2 cut(s) | 1366, 1543 |
| CfoI | GCGC | 1 cut(s) | 1130 |
| Cfr10I | RCCGGY | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 4 cut(s) | 265, 910, 1978, 2459 |
| ClaI | ATCGAT | 1 cut(s) | 1836 |
| CseI | GACGC | 3 cut(s) | 1049, 1954, 2550 |
| Csp6I | GTAC | 7 cut(s) | 773, 1446, 1628, 1808, 1829, 1920, 2588 |
| CviQI | GTAC | 7 cut(s) | 773, 1446, 1628, 1808, 1829, 1920, 2588 |
| DdeI | CTNAG | 8 cut(s) | 152, 1581, 1881, 2039, 2053, 2349, 2367, 2600 |
| DraI | TTTAAA | 3 cut(s) | 438, 525, 1333 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 141, 405 |
| EarI | CTCTTC | 2 cut(s) | 141, 405 |
| Eco24I | GRGCYC | 1 cut(s) | 1020 |
| Eco31I | GGTCTC | 1 cut(s) | 1425 |
| Eco47I | GGWCC | 3 cut(s) | 265, 910, 1978 |
| Eco57I | CTGAAG | 2 cut(s) | 1925, 2489 |
| Eco88I | CYCGRG | 2 cut(s) | 199, 1388 |
| EcoRI | GAATTC | 1 cut(s) | 876 |
| EcoT22I | ATGCAT | 1 cut(s) | 1461 |
| EcoT38I | GRGCYC | 1 cut(s) | 1020 |
| Esp3I | CGTCTC | 1 cut(s) | 1242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1029, 1061 |
| FaqI | GGGAC | 3 cut(s) | 1499, 2074, 2215 |
| FbaI | TGATCA | 1 cut(s) | 2251 |
| FblI | GTMKAC | 1 cut(s) | 402 |
| Fnu4HI | GCNGC | 4 cut(s) | 505, 1990, 2131, 2458 |
| FokI | GGATG | 6 cut(s) | 497, 635, 1014, 1930, 2182, 2410 |
| FriOI | GRGCYC | 1 cut(s) | 1020 |
| Fsp4HI | GCNGC | 4 cut(s) | 505, 1990, 2131, 2458 |
| FspBI | CTAG | 6 cut(s) | 681, 978, 995, 1313, 1451, 1604 |
| GlaI | GCGC | 1 cut(s) | 1129 |
| GluI | GCNGC | 4 cut(s) | 505, 1990, 2131, 2458 |
| GsaI | CCCAGC | 3 cut(s) | 466, 496, 617 |
| GsuI | CTGGAG | 3 cut(s) | 45, 1661, 2129 |
| HaeIII | GGCC | 2 cut(s) | 5, 2460 |
| HapII | CCGG | 6 cut(s) | 6, 1190, 1517, 2022, 2294, 2394 |
| HgaI | GACGC | 3 cut(s) | 1049, 1954, 2550 |
| HhaI | GCGC | 1 cut(s) | 1130 |
| Hin6I | GCGC | 1 cut(s) | 1128 |
| HinP1I | GCGC | 1 cut(s) | 1128 |
| HincII | GTYRAC | 4 cut(s) | 403, 672, 1029, 1177 |
| HindII | GTYRAC | 4 cut(s) | 403, 672, 1029, 1177 |
| HindIII | AAGCTT | 4 cut(s) | 369, 1907, 2186, 2351 |
| HinfI | GANTC | 7 cut(s) | 140, 197, 467, 578, 642, 1502, 1855 |
| HpaI | GTTAAC | 1 cut(s) | 1177 |
| HpaII | CCGG | 6 cut(s) | 6, 1190, 1517, 2022, 2294, 2394 |
| HphI | GGTGA | 3 cut(s) | 537, 1931, 2415 |
| Hpy99I | CGWCG | 4 cut(s) | 47, 167, 1970, 1973 |
| HpyAV | CCTTC | 7 cut(s) | 142, 736, 1515, 1586, 2159, 2522, 2575 |
| HpyCH4III | ACNGT | 3 cut(s) | 1432, 2584, 2592 |
| HpyCH4IV | ACGT | 7 cut(s) | 45, 76, 1235, 1380, 1626, 1632, 2243 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 610, 1678, 2127 |
| HpyF3I | CTNAG | 8 cut(s) | 152, 1581, 1881, 2039, 2053, 2349, 2367, 2600 |
| HpySE526I | ACGT | 7 cut(s) | 45, 76, 1235, 1380, 1626, 1632, 2243 |
| HspAI | GCGC | 1 cut(s) | 1128 |
| Kpn2I | TCCGGA | 2 cut(s) | 2021, 2293 |
| Ksp22I | TGATCA | 1 cut(s) | 2251 |
| KspAI | GTTAAC | 1 cut(s) | 1177 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 1 cut(s) | 957 |
| Lsp1109I | GCAGC | 3 cut(s) | 516, 1976, 2117 |
| LweI | GCATC | 5 cut(s) | 245, 669, 1090, 1446, 2454 |
| MaeI | CTAG | 6 cut(s) | 681, 978, 995, 1313, 1451, 1604 |
| MaeII | ACGT | 7 cut(s) | 45, 76, 1235, 1380, 1626, 1632, 2243 |
| MaeIII | GTNAC | 7 cut(s) | 990, 1094, 1354, 1376, 1426, 1844, 2421 |
| MflI | RGATCY | 4 cut(s) | 270, 328, 1513, 2540 |
| MhlI | GDGCHC | 5 cut(s) | 124, 312, 1020, 2082, 2348 |
| MlyI | GAGTC | 1 cut(s) | 191 |
| MmeI | TCCRAC | 3 cut(s) | 396, 1188, 1956 |
| Mph1103I | ATGCAT | 1 cut(s) | 1461 |
| MroI | TCCGGA | 2 cut(s) | 2021, 2293 |
| MroXI | GAANNNNTTC | 2 cut(s) | 577, 789 |
| MslI | CAYNNNNRTG | 5 cut(s) | 79, 1293, 1548, 1635, 2520 |
| MspA1I | CMGCKG | 1 cut(s) | 613 |
| MspCI | CTTAAG | 1 cut(s) | 350 |
| MspI | CCGG | 6 cut(s) | 6, 1190, 1517, 2022, 2294, 2394 |
| MspR9I | CCNGG | 2 cut(s) | 1518, 2395 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 610, 1678, 2127 |
| NciI | CCSGG | 2 cut(s) | 1518, 2395 |
| NlaIV | GGNNCC | 4 cut(s) | 309, 394, 2388, 2445 |
| NmuCI | GTSAC | 3 cut(s) | 1376, 1844, 2421 |
| NsiI | ATGCAT | 1 cut(s) | 1461 |
| NspI | RCATGY | 1 cut(s) | 1326 |
| OliI | CACNNNNGTG | 1 cut(s) | 79 |
| PaeR7I | CTCGAG | 1 cut(s) | 199 |
| PagI | TCATGA | 2 cut(s) | 1366, 1543 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 171, 206, 1386, 2444 |
| PdmI | GAANNNNTTC | 2 cut(s) | 577, 789 |
| PfeI | GAWTC | 6 cut(s) | 140, 467, 578, 642, 1502, 1855 |
| PflFI | GACNNNGTC | 1 cut(s) | 1490 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 274 |
| PfoI | TCCNGGA | 2 cut(s) | 1516, 2393 |
| PkrI | GCNGC | 4 cut(s) | 506, 1991, 2132, 2459 |
| PleI | GAGTC | 1 cut(s) | 191 |
| PpsI | GAGTC | 1 cut(s) | 191 |
| Ppu21I | YACGTR | 3 cut(s) | 77, 1633, 2244 |
| PshBI | ATTAAT | 3 cut(s) | 2091, 2232, 2429 |
| PsiI | TTATAA | 1 cut(s) | 971 |
| PspFI | CCCAGC | 3 cut(s) | 462, 492, 613 |
| PspN4I | GGNNCC | 4 cut(s) | 309, 394, 2388, 2445 |
| PspPI | GGNCC | 4 cut(s) | 265, 910, 1978, 2459 |
| PspXI | VCTCGAGB | 1 cut(s) | 199 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1791, 1823, 2580, 2612 |
| PstI | CTGCAG | 1 cut(s) | 2276 |
| PsuI | RGATCY | 4 cut(s) | 270, 328, 1513, 2540 |
| PsyI | GACNNNGTC | 1 cut(s) | 1490 |
| PvuII | CAGCTG | 1 cut(s) | 613 |
| RsaI | GTAC | 7 cut(s) | 774, 1447, 1629, 1809, 1830, 1921, 2589 |
| RsaNI | GTAC | 7 cut(s) | 773, 1446, 1628, 1808, 1829, 1920, 2588 |
| RseI | CAYNNNNRTG | 5 cut(s) | 79, 1293, 1548, 1635, 2520 |
| SalI | GTCGAC | 1 cut(s) | 401 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SatI | GCNGC | 4 cut(s) | 505, 1990, 2131, 2458 |
| Sau96I | GGNCC | 4 cut(s) | 265, 910, 1978, 2459 |
| ScaI | AGTACT | 1 cut(s) | 2589 |
| SchI | GAGTC | 1 cut(s) | 191 |
| ScrFI | CCNGG | 2 cut(s) | 1518, 2395 |
| SduI | GDGCHC | 5 cut(s) | 124, 312, 1020, 2082, 2348 |
| SfaNI | GCATC | 5 cut(s) | 245, 669, 1090, 1446, 2454 |
| SfcI | CTRYAG | 2 cut(s) | 2272, 2583 |
| Sfr274I | CTCGAG | 1 cut(s) | 199 |
| SinI | GGWCC | 3 cut(s) | 265, 910, 1978 |
| SlaI | CTCGAG | 1 cut(s) | 199 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 79, 1293, 1548, 1635, 2520 |
| SmlI | CTYRAG | 6 cut(s) | 199, 350, 1108, 1895, 2000, 2141 |
| SmoI | CTYRAG | 6 cut(s) | 199, 350, 1108, 1895, 2000, 2141 |
| SsiI | CCGC | 2 cut(s) | 390, 2457 |
| SspI | AATATT | 1 cut(s) | 1308 |
| SspMI | CTAG | 6 cut(s) | 681, 978, 995, 1313, 1451, 1604 |
| StyD4I | CCNGG | 2 cut(s) | 1516, 2393 |
| TaaI | ACNGT | 3 cut(s) | 1432, 2584, 2592 |
| TaiI | ACGT | 7 cut(s) | 48, 79, 1238, 1383, 1629, 1635, 2246 |
| TaqI | TCGA | 9 cut(s) | 126, 200, 209, 402, 1007, 1836, 1971, 2135, 2331 |
| TatI | WGTACW | 4 cut(s) | 772, 1807, 1919, 2587 |
| TauI | GCSGC | 1 cut(s) | 2460 |
| TfiI | GAWTC | 6 cut(s) | 140, 467, 578, 642, 1502, 1855 |
| TscAI | CASTG | 2 cut(s) | 1885, 2587 |
| TseFI | GTSAC | 3 cut(s) | 1376, 1844, 2421 |
| TseI | GCWGC | 3 cut(s) | 504, 1989, 2130 |
| Tsp45I | GTSAC | 3 cut(s) | 1376, 1844, 2421 |
| TspGWI | ACGGA | 2 cut(s) | 1792, 1796 |
| TspRI | CASTG | 2 cut(s) | 1885, 2587 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1490 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 274 |
| Vha464I | CTTAAG | 1 cut(s) | 350 |
| VpaK11BI | GGWCC | 3 cut(s) | 265, 910, 1978 |
| VspI | ATTAAT | 3 cut(s) | 2091, 2232, 2429 |
| XapI | RAATTY | 7 cut(s) | 594, 788, 801, 876, 1249, 1822, 2380 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 1 cut(s) | 1326 |
| XhoI | CTCGAG | 1 cut(s) | 199 |
| XmiI | GTMKAC | 1 cut(s) | 402 |
| XmnI | GAANNNNTTC | 2 cut(s) | 577, 789 |
| XspI | CTAG | 6 cut(s) | 681, 978, 995, 1313, 1451, 1604 |
| ZrmI | AGTACT | 1 cut(s) | 2589 |
| Zsp2I | ATGCAT | 1 cut(s) | 1461 |