pycom01g20210

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
18594109 .. 18597513
3405 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g20210.2

Sequence Viewer

Length: 2754 bp
ATGGTGAGAAAATTCATGACAGAGGGAGCAGCAGTAGCAGACGAAGAAGACTTCGTTAGAATCATTATAACAACAAGAGATATGCAATTACTAAGTGGAGATGATGCTGTATATAAGCCCAAGAACTTAAGTGAGCCAGAAGCTCTTGAACTCTTCAGTCTGTATGCCTTCAAAACCAACCAACCCACAAGAGATTATGATCGTCTCTCGAGGCTTGCCATACAACATGCTCATGGTGTGCCTTTAGCGCTTAAAGTCTTGGGAGCTTTGCTTGATAACAGAAGTGTATGGGAGTGGGAAGATGTGTTGAAGAAAACAAAGAAAACCCAGCTCATGGGAATTCAGGATGTTCTTAGAAAGAGCTTTGATGGGTTAGATGAATCAGAGAAGGACATATTTCTAGATATTGCATGTTTCTTTAAAGGGATGGAGAAAGACTATGTAACTGAAATTCTGGATAGTTGTGGCTTTTATCCCCATAGTGGATTAGGAGTGCTAGTTAACAGAACTCTCATCACTATATCAGATTACGATACGCTTGAGATGCATGATTTACTGCAAGAAATGGGGTGGGAAATAGTCCGCCAAGAATCTAATAAAGATCCTGGAAGACGAAGCAGGTTATGGATTTATGAAGATGTTCATTGTGCATTAACGCAAAATACGGCTACAAAAGCAGTTGAAGGCATAATCCTCGACTTGGCCAACTCAGAAGAGGTATACTTCGAAGCTGAAGCTTTTGTTAGAATGACAAAACTAAGACTTCTCAAGATCCATTGCAGCCGATCCATGGTAAACGCATCATGGGAGGACCGATCCCATCCAAATGATGACTGTAAACAAAATATGAGTGGGGATTTAAAATTTCTCTCTCACGAGTTGAGGTGTCTATGCTGGCATGGGTGCCCCTTAAAGTCCTTGCCATCCAATTTCCACCCCAAGAATCTTATCGATCTTGAAATGCCTTATAGTCAGATTGAACAACTTTGGGAAGGAAGCAAGCGTCTGGAAAGGTTGGAATTCATCGATTTAAGTTATTCTCAATACCTTAACAAAATCCCGGATGTCACTGAAGCAAAAAATCTTGAGATTCTAAATCTTGAAGGTTGTTCAAGTTTAACTGAAGTTCACCCATCGGTTTCAGATCTTACCAACCTTGTTTTTCTGAGTCTAAAAGAGTGCAAAGAACTTCAGGTTCTTTCAAGAAGAATTCACATGAAATCTCTTAAAACCCTTATTCTTTCTGGCTGCTCAAATCTTGATAAGTTTCCAGAGATTTCAGGAAGTATGCAGGAGCTATCAGAGCTTTATCTAGATCGGACAGCAATTGAAGAACTTCCCTCATCGATTAGTATTCTTATGGGGCTTGTTACTTTGAACCTGAATGATTGCACAAAACTTAAAAGTCTTCCAAGCAGCATTTGTCAACTAAAGTCCCTCAGATATGTTACTCTCTCTGGTTGTTCAAAGCTTAAAAGCTTTCCAGTGATTGCAGAAGATATGGAAGGATTAAGAGAGCTTCATTTGGATGGAACACCTATCAAAAAGCTGTCCCCATCAATTGAACGTCTTAAGGGGCTCGTGTTATTAACTATGAAAAACTGCAAAAGCCTTGTCTGTCTTCCGAACAGTATCTGTAAATTGGAATACCTTACCGGTCTTACTCTCTCTGGGTGTTCAAAACTTTATTATTTGCCTAAGGACTTGGGGAATATAAAATCGTTGAGGGACGTTGATGTAGAGGGAAGTGGTATAGAACAACCATTCTCTATGTCGAGTTCAATCATGCCTGCAACATTATCTGGTAGATGGAAGGCAAAGAAGGTCCCATTTGTATCATTGTTACCAAAACCATCGGCTCATAGACACTATGAAAACCTTGTATGGCCTGAAAGCCTTGTATCGCTTGATTTAAGTGACTGCAAACTGATAGAATTACCGGATTCTGTTACGAATCTAATTCATTTGATAACATTAGTGTTGTGCAGAAACAATTTTGAGAGGTTACCTGCAACTATGGATCGACTTTGTCGTTTAAAAAATTTCAACTTGGAAGCTTGCAGGAGACTAATATCAATACCACAGCTTTCATCAAATATTACTAAGATAGATGCACATGATTGCACAGCTTTGGAAACAGTTTCAACACCAAAGCCTCATTATATGAATCTTTACTTCATATTTTCTAACTGCCTCCGGCTGGTACGAAAAAATCCATTCAGGGATATTGTGGAAGCTCATTGTCATGGTCAGGGTAATCATCTCCGGCAATTTTCCTTTAACATGTCTCTTCCTGGAAGTGATATTCCAGATTGGTTTAGCCAACAGTGTACAGGGTCTTCGGTAACTGCGCAGCTACAACTGAATTTGTTCCACAATAAGTTACTGGGATTTGCTATATGCGCTGTTAGTAATTTCAAGAGTGCTCATTACTGTGCATCTAATTTATCTGTTCAATGCTTTTGCACCTTCAAAGGAAATCACCATGAGTACAGCTCCAATATCTATATGCTGGATTGGGATTTCAAAACTGACAGATTCCTTGAGTCGGATCACATGTTCTTAGGATATGTTCCATGGTCTAAGTATGACTTGATTGAAACGGGAAAGCAGGCCTATGAACGTTGTTACACTGAGGCCACATTCAAATTTGTTGTTAAAGATGGAGGCTACATACGTGATTTCAGAGCAGCAGTACGATACCCTTCCATCAGAAGGTGTGGAGTTCATTTTATTTATGCAAATCATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

918

Amino Acids

104.61

Weight (kDa)

6.42

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 68
Acc16I TGCGCA 1 cut(s) 2352
Acc36I ACCTGC 2 cut(s) 609, 2017
AccB1I GGYRCC 1 cut(s) 903
AccB7I CCANNNNNTGG 1 cut(s) 334
AccI GTMKAC 1 cut(s) 720
AciI CCGC 1 cut(s) 583
AclI AACGTT 1 cut(s) 2623
AclWI GGATC 6 cut(s) 596, 766, 780, 810, 2028, 2559
AcoI YGGCCR 1 cut(s) 702
AcsI RAATTY 9 cut(s) 11, 339, 450, 863, 1019, 1209, 2041, 2365, 2648
AcuI CTGAAG 5 cut(s) 139, 753, 1092, 1143, 1175
AfaI GTAC 4 cut(s) 2205, 2332, 2492, 2697
AfeI AGCGCT 1 cut(s) 249
AfiI CCNNNNNNNGG 7 cut(s) 334, 482, 700, 790, 2200, 2548, 2715
AflII CTTAAG 2 cut(s) 127, 1571
AflIII ACRYGT 2 cut(s) 2283, 2556
AgeI ACCGGT 1 cut(s) 1655
AjnI CCWGG 2 cut(s) 604, 2293
AloI GAACNNNNNNTCC 2 cut(s) 2543, 2575
Alw21I GWGCWC 1 cut(s) 2428
Alw26I GTCTC 3 cut(s) 209, 2059, 2292
AlwI GGATC 6 cut(s) 596, 766, 780, 810, 2028, 2559
AlwNI CAGNNNCTG 1 cut(s) 1635
Ama87I CYCGRG 1 cut(s) 208
Aor51HI AGCGCT 1 cut(s) 249
AoxI GGCC 4 cut(s) 702, 1886, 2613, 2637
ApeKI GCWGC 6 cut(s) 29, 780, 1248, 1416, 2353, 2690
ApoI RAATTY 9 cut(s) 11, 339, 450, 863, 1019, 1209, 2041, 2365, 2648
ArsI GACNNNNNNTTYG 2 cut(s) 1599, 1631
AsiGI ACCGGT 1 cut(s) 1655
Asp700I GAANNNNTTC 3 cut(s) 639, 1335, 2369
AspLEI GCGC 3 cut(s) 250, 2353, 2405
AspS9I GGNCC 2 cut(s) 811, 1825
AsuC2I CCSGG 1 cut(s) 1061
AsuHPI GGTGA 3 cut(s) 16, 1121, 2474
AsuII TTCGAA 1 cut(s) 726
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 2 cut(s) 811, 1825
AxyI CCTNAGG 1 cut(s) 1698
BaeGI GKGCMC 1 cut(s) 908
BalI TGGCCA 1 cut(s) 704
BanI GGYRCC 1 cut(s) 903
BanII GRGCYC 1 cut(s) 1581
BarI GAAGNNNNNNTAC 2 cut(s) 2323, 2355
BauI CACGAG 2 cut(s) 875, 1580
BbsI GAAGAC 5 cut(s) 54, 616, 1400, 1613, 2331
Bbv12I GWGCWC 1 cut(s) 2428
BbvI GCAGC 6 cut(s) 41, 792, 1235, 1428, 2365, 2702
BceAI ACGGC 1 cut(s) 681
BcgI CGANNNNNNTGC 2 cut(s) 676, 710
BciT130I CCWGG 2 cut(s) 606, 2295
BcnI CCSGG 1 cut(s) 1061
BcoDI GTCTC 3 cut(s) 209, 2059, 2292
BfaI CTAG 3 cut(s) 401, 497, 1313
BfoI RGCGCY 1 cut(s) 251
BfrI CTTAAG 2 cut(s) 127, 1571
BfuAI ACCTGC 2 cut(s) 609, 2017
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 6 cut(s) 30, 781, 1249, 1417, 2354, 2691
BlsI GCNGC 6 cut(s) 31, 782, 1250, 1418, 2355, 2692
Bme1390I CCNGG 3 cut(s) 606, 1061, 2295
Bme18I GGWCC 2 cut(s) 811, 1825
BmeT110I CYCGRG 1 cut(s) 208
BmgT120I GGNCC 2 cut(s) 811, 1825
BmiI GGNNCC 2 cut(s) 905, 1827
BmrFI CCNGG 3 cut(s) 606, 1061, 2295
BmrI ACTGGG 1 cut(s) 2396
BmsI GCATC 5 cut(s) 94, 534, 809, 2101, 2447
BmuI ACTGGG 1 cut(s) 2396
BpiI GAAGAC 5 cut(s) 54, 616, 1400, 1613, 2331
BplI GAGNNNNNCTC 2 cut(s) 2480, 2512
Bpu14I TTCGAA 1 cut(s) 726
BpuEI CTTGAG 4 cut(s) 560, 752, 1106, 2564
BpuMI CCSGG 1 cut(s) 1061
Bsa29I ATCGAT 3 cut(s) 951, 1026, 1346
BsaAI YACGTR 1 cut(s) 2678
BsaBI GATNNNNATC 1 cut(s) 198
BsaJI CCNNGG 2 cut(s) 789, 2576
BsaWI WCCGGW 2 cut(s) 1655, 1939
BsaXI ACNNNNNCTCC 4 cut(s) 18, 48, 483, 513
Bsc4I CCNNNNNNNGG 7 cut(s) 334, 482, 700, 790, 2200, 2548, 2715
Bse118I RCCGGY 1 cut(s) 1655
Bse1I ACTGG 2 cut(s) 1484, 2391
Bse21I CCTNAGG 1 cut(s) 1698
Bse3DI GCAATG 1 cut(s) 775
Bse8I GATNNNNATC 1 cut(s) 198
BseBI CCWGG 2 cut(s) 606, 2295
BseCI ATCGAT 3 cut(s) 951, 1026, 1346
BseDI CCNNGG 2 cut(s) 789, 2576
BseGI GGATG 6 cut(s) 352, 432, 820, 923, 1069, 1534
BseJI GATNNNNATC 1 cut(s) 198
BseLI CCNNNNNNNGG 7 cut(s) 334, 482, 700, 790, 2200, 2548, 2715
BseMI GCAATG 1 cut(s) 775
BseMII CTCAG 4 cut(s) 723, 1157, 1453, 2625
BseNI ACTGG 2 cut(s) 1484, 2391
BseSI GKGCMC 1 cut(s) 908
BseXI GCAGC 6 cut(s) 41, 792, 1235, 1428, 2365, 2702
BseYI CCCAGC 1 cut(s) 327
BsgI GTGCAG 1 cut(s) 2005
BshFI GGCC 4 cut(s) 704, 1888, 2615, 2639
BshNI GGYRCC 1 cut(s) 903
BshTI ACCGGT 1 cut(s) 1655
BshVI ATCGAT 3 cut(s) 951, 1026, 1346
BsiHKAI GWGCWC 1 cut(s) 2428
BsiHKCI CYCGRG 1 cut(s) 208
BsiSI CCGG 5 cut(s) 1061, 1656, 1940, 2197, 2266
BslFI GGGAC 4 cut(s) 1420, 1537, 1742, 1811
BslI CCNNNNNNNGG 7 cut(s) 334, 482, 700, 790, 2200, 2548, 2715
BsmAI GTCTC 3 cut(s) 209, 2059, 2292
BsmBI CGTCTC 1 cut(s) 209
BsmFI GGGAC 4 cut(s) 1420, 1537, 1742, 1811
BsnI GGCC 4 cut(s) 704, 1888, 2615, 2639
BsoBI CYCGRG 1 cut(s) 208
Bsp119I TTCGAA 1 cut(s) 726
Bsp1286I GDGCHC 3 cut(s) 908, 1581, 2428
Bsp1407I TGTACA 1 cut(s) 2330
Bsp19I CCATGG 2 cut(s) 789, 2576
BspACI CCGC 1 cut(s) 583
BspANI GGCC 4 cut(s) 704, 1888, 2615, 2639
BspCNI CTCAG 4 cut(s) 722, 1158, 1452, 2626
BspDI ATCGAT 3 cut(s) 951, 1026, 1346
BspHI TCATGA 2 cut(s) 15, 2746
BspLI GGNNCC 2 cut(s) 905, 1827
BspMI ACCTGC 2 cut(s) 609, 2017
BspPI GGATC 6 cut(s) 596, 766, 780, 810, 2028, 2559
BspT104I TTCGAA 1 cut(s) 726
BspT107I GGYRCC 1 cut(s) 903
BspTI CTTAAG 2 cut(s) 127, 1571
BsrDI GCAATG 1 cut(s) 775
BsrFI RCCGGY 1 cut(s) 1655
BsrGI TGTACA 1 cut(s) 2330
BsrI ACTGG 2 cut(s) 1484, 2391
BssAI RCCGGY 1 cut(s) 1655
BssECI CCNNGG 2 cut(s) 789, 2576
BssNAI GTATAC 1 cut(s) 721
BssSI CACGAG 2 cut(s) 875, 1580
BssT1I CCWWGG 2 cut(s) 789, 2576
Bst1107I GTATAC 1 cut(s) 721
Bst2BI CACGAG 2 cut(s) 875, 1580
Bst2UI CCWGG 2 cut(s) 606, 2295
Bst4CI ACNGT 5 cut(s) 836, 1631, 2140, 2328, 2435
Bst6I CTCTTC 3 cut(s) 158, 708, 2295
BstAFI CTTAAG 2 cut(s) 127, 1571
BstAUI TGTACA 1 cut(s) 2330
BstBAI YACGTR 1 cut(s) 2678
BstBI TTCGAA 1 cut(s) 726
BstC8I GCNNGC 6 cut(s) 216, 896, 1001, 1791, 2059, 2613
BstDSI CCRYGG 2 cut(s) 789, 2576
BstEII GGTNACC 1 cut(s) 2004
BstF5I GGATG 6 cut(s) 352, 432, 820, 923, 1069, 1534
BstH2I RGCGCY 1 cut(s) 251
BstHHI GCGC 3 cut(s) 250, 2353, 2405
BstMAI GTCTC 3 cut(s) 209, 2059, 2292
BstMWI GCNNNNNNNGC 6 cut(s) 35, 247, 544, 674, 1303, 2402
BstNI CCWGG 2 cut(s) 606, 2295
BstNSI RCATGY 4 cut(s) 230, 414, 2287, 2560
BstPI GGTNACC 1 cut(s) 2004
BstSCI CCNGG 3 cut(s) 604, 1059, 2293
BstSLI GKGCMC 1 cut(s) 908
BstV1I GCAGC 6 cut(s) 41, 792, 1235, 1428, 2365, 2702
BstV2I GAAGAC 5 cut(s) 54, 616, 1400, 1613, 2331
BstX2I RGATCY 3 cut(s) 601, 771, 1144
BstYI RGATCY 3 cut(s) 601, 771, 1144
BstZ17I GTATAC 1 cut(s) 721
Bsu15I ATCGAT 3 cut(s) 951, 1026, 1346
Bsu36I CCTNAGG 1 cut(s) 1698
BsuRI GGCC 4 cut(s) 704, 1888, 2615, 2639
BsuTUI ATCGAT 3 cut(s) 951, 1026, 1346
BtgI CCRYGG 2 cut(s) 789, 2576
BtsCI GGATG 6 cut(s) 352, 432, 820, 923, 1069, 1534
BtsIMutI CAGTG 4 cut(s) 1068, 1491, 2333, 2631
BveI ACCTGC 2 cut(s) 609, 2017
Cac8I GCNNGC 6 cut(s) 216, 896, 1001, 1791, 2059, 2613
CaiI CAGNNNCTG 1 cut(s) 1635
CciI TCATGA 2 cut(s) 15, 2746
CfoI GCGC 3 cut(s) 250, 2353, 2405
Cfr10I RCCGGY 1 cut(s) 1655
Cfr13I GGNCC 2 cut(s) 811, 1825
ClaI ATCGAT 3 cut(s) 951, 1026, 1346
CseI GACGC 1 cut(s) 992
Csp6I GTAC 4 cut(s) 2204, 2331, 2491, 2696
CspAI ACCGGT 1 cut(s) 1655
CviQI GTAC 4 cut(s) 2204, 2331, 2491, 2696
DraI TTTAAA 3 cut(s) 421, 861, 2037
EaeI YGGCCR 1 cut(s) 702
Eam1104I CTCTTC 3 cut(s) 158, 708, 2295
EarI CTCTTC 3 cut(s) 158, 708, 2295
EciI GGCGGA 1 cut(s) 572
Eco130I CCWWGG 2 cut(s) 789, 2576
Eco147I AGGCCT 1 cut(s) 2615
Eco24I GRGCYC 1 cut(s) 1581
Eco47I GGWCC 2 cut(s) 811, 1825
Eco47III AGCGCT 1 cut(s) 249
Eco57I CTGAAG 5 cut(s) 139, 753, 1092, 1143, 1175
Eco81I CCTNAGG 1 cut(s) 1698
Eco88I CYCGRG 1 cut(s) 208
Eco91I GGTNACC 1 cut(s) 2004
EcoO109I RGGNCCY 1 cut(s) 1825
EcoO65I GGTNACC 1 cut(s) 2004
EcoRI GAATTC 3 cut(s) 339, 1019, 1209
EcoRII CCWGG 2 cut(s) 604, 2293
EcoT14I CCWWGG 2 cut(s) 789, 2576
EcoT22I ATGCAT 1 cut(s) 549
EcoT38I GRGCYC 1 cut(s) 1581
ErhI CCWWGG 2 cut(s) 789, 2576
Esp3I CGTCTC 1 cut(s) 209
FalI AAGNNNNNCTT 2 cut(s) 2576, 2608
FaqI GGGAC 4 cut(s) 1420, 1537, 1742, 1811
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 6 cut(s) 30, 781, 1249, 1417, 2354, 2691
FokI GGATG 6 cut(s) 359, 439, 807, 910, 1076, 1541
FriOI GRGCYC 1 cut(s) 1581
Fsp4HI GCNGC 6 cut(s) 30, 781, 1249, 1417, 2354, 2691
FspBI CTAG 3 cut(s) 401, 497, 1313
FspI TGCGCA 1 cut(s) 2352
GlaI GCGC 3 cut(s) 249, 2352, 2404
GluI GCNGC 6 cut(s) 30, 781, 1249, 1417, 2354, 2691
GsaI CCCAGC 1 cut(s) 331
HaeII RGCGCY 1 cut(s) 251
HaeIII GGCC 4 cut(s) 704, 1888, 2615, 2639
HapII CCGG 5 cut(s) 1061, 1656, 1940, 2197, 2266
HgaI GACGC 1 cut(s) 992
HhaI GCGC 3 cut(s) 250, 2353, 2405
Hin6I GCGC 3 cut(s) 248, 2351, 2403
HinP1I GCGC 3 cut(s) 248, 2351, 2403
HincII GTYRAC 2 cut(s) 502, 1427
HindII GTYRAC 2 cut(s) 502, 1427
HindIII AAGCTT 4 cut(s) 735, 1469, 1477, 2055
HpaI GTTAAC 1 cut(s) 502
HpaII CCGG 5 cut(s) 1061, 1656, 1940, 2197, 2266
HphI GGTGA 3 cut(s) 16, 1121, 2474
Hpy166II GTNNAC 7 cut(s) 502, 721, 796, 839, 1129, 1427, 2331
Hpy8I GTNNAC 7 cut(s) 502, 721, 796, 839, 1129, 1427, 2331
HpyCH4III ACNGT 5 cut(s) 836, 1631, 2140, 2328, 2435
HpyCH4IV ACGT 4 cut(s) 1567, 1731, 2623, 2677
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 247, 544, 674, 1303, 2402
HpySE526I ACGT 4 cut(s) 1567, 1731, 2623, 2677
HspAI GCGC 3 cut(s) 248, 2351, 2403
KspAI GTTAAC 1 cut(s) 502
LmnI GCTCC 4 cut(s) 26, 263, 1294, 2501
Lsp1109I GCAGC 6 cut(s) 41, 792, 1235, 1428, 2365, 2702
LweI GCATC 5 cut(s) 94, 534, 809, 2101, 2447
MaeI CTAG 3 cut(s) 401, 497, 1313
MaeII ACGT 4 cut(s) 1567, 1731, 2623, 2677
MfeI CAATTG 2 cut(s) 1326, 1560
MflI RGATCY 3 cut(s) 601, 771, 1144
MhlI GDGCHC 3 cut(s) 908, 1581, 2428
MlsI TGGCCA 1 cut(s) 704
MluNI TGGCCA 1 cut(s) 704
MlyI GAGTC 2 cut(s) 1177, 2555
MmeI TCCRAC 2 cut(s) 996, 2529
Mox20I TGGCCA 1 cut(s) 704
Mph1103I ATGCAT 1 cut(s) 549
MroXI GAANNNNTTC 3 cut(s) 639, 1335, 2369
MscI TGGCCA 1 cut(s) 704
MslI CAYNNNNRTG 5 cut(s) 231, 825, 1527, 2244, 2433
Msp20I TGGCCA 1 cut(s) 704
MspCI CTTAAG 2 cut(s) 127, 1571
MspI CCGG 5 cut(s) 1061, 1656, 1940, 2197, 2266
MspR9I CCNGG 3 cut(s) 606, 1061, 2295
MunI CAATTG 2 cut(s) 1326, 1560
MvaI CCWGG 2 cut(s) 606, 2295
MwoI GCNNNNNNNGC 6 cut(s) 35, 247, 544, 674, 1303, 2402
NciI CCSGG 1 cut(s) 1061
NcoI CCATGG 2 cut(s) 789, 2576
NlaIV GGNNCC 2 cut(s) 905, 1827
NmuCI GTSAC 2 cut(s) 1066, 1916
NsbI TGCGCA 1 cut(s) 2352
NsiI ATGCAT 1 cut(s) 549
NspI RCATGY 4 cut(s) 230, 414, 2287, 2560
NspV TTCGAA 1 cut(s) 726
PaeR7I CTCGAG 1 cut(s) 208
PagI TCATGA 2 cut(s) 15, 2746
PceI AGGCCT 1 cut(s) 2615
PciI ACATGT 2 cut(s) 2283, 2556
PcsI WCGNNNNNNNCGW 1 cut(s) 2029
PdmI GAANNNNTTC 3 cut(s) 639, 1335, 2369
PfeI GAWTC 9 cut(s) 60, 380, 590, 943, 1090, 1943, 1954, 2167, 2538
PflFI GACNNNGTC 1 cut(s) 2028
PflMI CCANNNNNTGG 1 cut(s) 334
PfoI TCCNGGA 3 cut(s) 604, 1059, 2293
PinAI ACCGGT 1 cut(s) 1655
PkrI GCNGC 6 cut(s) 31, 782, 1250, 1418, 2355, 2692
PleI GAGTC 2 cut(s) 1176, 2554
PpsI GAGTC 2 cut(s) 1176, 2554
Ppu21I YACGTR 1 cut(s) 2678
PpuMI RGGWCCY 1 cut(s) 1825
PscI ACATGT 2 cut(s) 2283, 2556
PsiI TTATAA 1 cut(s) 68
Psp1406I AACGTT 1 cut(s) 2623
Psp5II RGGWCCY 1 cut(s) 1825
Psp6I CCWGG 2 cut(s) 604, 2293
PspEI GGTNACC 1 cut(s) 2004
PspFI CCCAGC 1 cut(s) 327
PspGI CCWGG 2 cut(s) 604, 2293
PspN4I GGNNCC 2 cut(s) 905, 1827
PspPI GGNCC 2 cut(s) 811, 1825
PspPPI RGGWCCY 1 cut(s) 1825
PstNI CAGNNNCTG 1 cut(s) 1635
PsuI RGATCY 3 cut(s) 601, 771, 1144
PsyI GACNNNGTC 1 cut(s) 2028
RsaI GTAC 4 cut(s) 2205, 2332, 2492, 2697
RsaNI GTAC 4 cut(s) 2204, 2331, 2491, 2696
RseI CAYNNNNRTG 5 cut(s) 231, 825, 1527, 2244, 2433
SatI GCNGC 6 cut(s) 30, 781, 1249, 1417, 2354, 2691
Sau96I GGNCC 2 cut(s) 811, 1825
SchI GAGTC 2 cut(s) 1177, 2555
ScrFI CCNGG 3 cut(s) 606, 1061, 2295
SduI GDGCHC 3 cut(s) 908, 1581, 2428
SfaNI GCATC 5 cut(s) 94, 534, 809, 2101, 2447
Sfr274I CTCGAG 1 cut(s) 208
SfuI TTCGAA 1 cut(s) 726
SinI GGWCC 2 cut(s) 811, 1825
SlaI CTCGAG 1 cut(s) 208
SmiMI CAYNNNNRTG 5 cut(s) 231, 825, 1527, 2244, 2433
SmlI CTYRAG 7 cut(s) 127, 208, 539, 767, 1085, 1571, 2543
SmoI CTYRAG 7 cut(s) 127, 208, 539, 767, 1085, 1571, 2543
SseBI AGGCCT 1 cut(s) 2615
SsiI CCGC 1 cut(s) 583
SspI AATATT 1 cut(s) 2098
SspMI CTAG 3 cut(s) 401, 497, 1313
StuI AGGCCT 1 cut(s) 2615
StyD4I CCNGG 3 cut(s) 604, 1059, 2293
StyI CCWWGG 2 cut(s) 789, 2576
TaaI ACNGT 5 cut(s) 836, 1631, 2140, 2328, 2435
TaiI ACGT 4 cut(s) 1570, 1734, 2626, 2680
TaqI TCGA 8 cut(s) 209, 696, 726, 951, 1026, 1346, 1775, 2023
TaqII GACCGA 1 cut(s) 828
TatI WGTACW 2 cut(s) 2330, 2490
TfiI GAWTC 9 cut(s) 60, 380, 590, 943, 1090, 1943, 1954, 2167, 2538
TscAI CASTG 4 cut(s) 1075, 1491, 2333, 2638
TseFI GTSAC 2 cut(s) 1066, 1916
TseI GCWGC 6 cut(s) 29, 780, 1248, 1416, 2353, 2690
Tsp45I GTSAC 2 cut(s) 1066, 1916
TspRI CASTG 4 cut(s) 1075, 1491, 2333, 2638
Tth111I GACNNNGTC 1 cut(s) 2028
Van91I CCANNNNNTGG 1 cut(s) 334
Vha464I CTTAAG 2 cut(s) 127, 1571
VpaK11BI GGWCC 2 cut(s) 811, 1825
XapI RAATTY 9 cut(s) 11, 339, 450, 863, 1019, 1209, 2041, 2365, 2648
XbaI TCTAGA 2 cut(s) 400, 1312
XceI RCATGY 4 cut(s) 230, 414, 2287, 2560
XhoI CTCGAG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 3 cut(s) 639, 1335, 2369
XspI CTAG 3 cut(s) 401, 497, 1313
Zsp2I ATGCAT 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.