TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 185 | 9.8e-54 | TIR domain |
| TIR_2 | PF13676 | 17 - 112 | 3.3e-14 | TIR domain |
| NB-ARC | PF00931 | 196 - 360 | 4.9e-14 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 499 | 3.6e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 701 - 797 | 3e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 750 - 825 | 5.3e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 768 - 852 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 833 - 896 | 7.5e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 1047 - 1204 | 4.2e-17 | C-JID domain |
| WRKY | PF03106 | 1302 - 1361 | 3.1e-06 | WRKY DNA -binding domain |
| WRKY | PF03106 | 1387 - 1444 | 4e-17 | WRKY DNA -binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4646 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4415 |
| Acc16I | TGCGCA | 1 cut(s) | 2967 |
| AccB1I | GGYRCC | 1 cut(s) | 2014 |
| AccBSI | CCGCTC | 1 cut(s) | 1744 |
| AccII | CGCG | 3 cut(s) | 239, 3254, 3387 |
| AccIII | TCCGGA | 1 cut(s) | 2494 |
| AclI | AACGTT | 1 cut(s) | 943 |
| AclWI | GGATC | 4 cut(s) | 186, 426, 551, 1031 |
| AcoI | YGGCCR | 3 cut(s) | 1736, 2714, 4383 |
| AcuI | CTGAAG | 9 cut(s) | 140, 739, 1057, 1650, 1693, 2285, 2798, 2870, 4167 |
| AcyI | GRCGYC | 1 cut(s) | 2015 |
| AdeI | CACNNNGTG | 3 cut(s) | 252, 1252, 1261 |
| AflII | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| AflIII | ACRYGT | 3 cut(s) | 1618, 3408, 4328 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4149 |
| AjiI | CACGTC | 1 cut(s) | 1118 |
| AjnI | CCWGG | 7 cut(s) | 683, 1160, 3142, 3270, 3900, 4198, 4435 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 928, 933, 960, 965, 1193, 1225, 4780, 4812 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3139, 3171 |
| Alw21I | GWGCWC | 6 cut(s) | 1171, 1257, 1423, 1452, 2123, 2549 |
| Alw26I | GTCTC | 3 cut(s) | 2911, 3012, 4136 |
| Alw44I | GTGCAC | 2 cut(s) | 1253, 2119 |
| AlwI | GGATC | 4 cut(s) | 186, 426, 551, 1031 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2505 |
| Ama87I | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| Aor13HI | TCCGGA | 1 cut(s) | 2494 |
| AoxI | GGCC | 6 cut(s) | 1736, 2637, 2714, 3483, 4008, 4383 |
| ApaLI | GTGCAC | 2 cut(s) | 1253, 2119 |
| ApeKI | GCWGC | 9 cut(s) | 617, 1943, 2084, 2145, 2331, 2864, 3693, 4254, 4633 |
| AseI | ATTAAT | 1 cut(s) | 3447 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1070, 1362, 1539, 2298, 2439, 2895 |
| AspLEI | GCGC | 5 cut(s) | 622, 2017, 2968, 3254, 4235 |
| AspS9I | GGNCC | 6 cut(s) | 4, 1795, 3898, 4008, 4151, 4784 |
| AsuC2I | CCSGG | 1 cut(s) | 3999 |
| AsuHPI | GGTGA | 8 cut(s) | 713, 1238, 1457, 3674, 4186, 4416, 4425, 4581 |
| AvaI | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| AvaII | GGWCC | 5 cut(s) | 4, 1795, 3898, 4151, 4784 |
| AxyI | CCTNAGG | 1 cut(s) | 3105 |
| BaeGI | GKGCMC | 3 cut(s) | 1257, 2123, 2380 |
| BalI | TGGCCA | 2 cut(s) | 2716, 4385 |
| BanI | GGYRCC | 1 cut(s) | 2014 |
| BanII | GRGCYC | 4 cut(s) | 1171, 1423, 1452, 4777 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3172, 3204 |
| BbsI | GAAGAC | 7 cut(s) | 43, 78, 2129, 2483, 3180, 3534, 4709 |
| Bbv12I | GWGCWC | 6 cut(s) | 1171, 1257, 1423, 1452, 2123, 2549 |
| BbvI | GCAGC | 9 cut(s) | 604, 1930, 2071, 2157, 2318, 2876, 3680, 4241, 4645 |
| BceAI | ACGGC | 5 cut(s) | 1846, 2312, 2344, 2453, 2909 |
| BciT130I | CCWGG | 7 cut(s) | 685, 1162, 3144, 3272, 3902, 4200, 4437 |
| BciVI | GTATCC | 3 cut(s) | 907, 1540, 2608 |
| BclI | TGATCA | 1 cut(s) | 718 |
| BcnI | CCSGG | 1 cut(s) | 3999 |
| BcoDI | GTCTC | 3 cut(s) | 2911, 3012, 4136 |
| BfaI | CTAG | 8 cut(s) | 860, 878, 981, 998, 1238, 1286, 1313, 4337 |
| BfmI | CTRYAG | 3 cut(s) | 1469, 2088, 2862 |
| BfoI | RGCGCY | 1 cut(s) | 2018 |
| BfrI | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| BfuI | GTATCC | 3 cut(s) | 907, 1540, 2608 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3690 |
| BglII | AGATCT | 1 cut(s) | 1704 |
| BlpI | GCTNAGC | 1 cut(s) | 3697 |
| BmcAI | AGTACT | 1 cut(s) | 996 |
| Bme1390I | CCNGG | 8 cut(s) | 685, 1162, 3144, 3272, 3902, 3999, 4200, 4437 |
| Bme18I | GGWCC | 5 cut(s) | 4, 1795, 3898, 4151, 4784 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4149 |
| BmeT110I | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| BmgBI | CACGTC | 1 cut(s) | 1118 |
| BmgT120I | GGNCC | 6 cut(s) | 4, 1795, 3898, 4008, 4151, 4784 |
| BmiI | GGNNCC | 8 cut(s) | 1796, 2016, 3648, 3683, 3899, 4441, 4539, 4798 |
| BmrFI | CCNGG | 8 cut(s) | 685, 1162, 3144, 3272, 3902, 3999, 4200, 4437 |
| BmrI | ACTGGG | 1 cut(s) | 2888 |
| BmuI | ACTGGG | 1 cut(s) | 2888 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1185, 1902 |
| BpiI | GAAGAC | 7 cut(s) | 43, 78, 2129, 2483, 3180, 3534, 4709 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3680, 3712, 3829, 3861 |
| BpmI | CTGGAG | 1 cut(s) | 448 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3697 |
| BpuEI | CTTGAG | 7 cut(s) | 1420, 2125, 2153, 2222, 2363, 3707, 4587 |
| BpuMI | CCSGG | 1 cut(s) | 3999 |
| Bsa29I | ATCGAT | 1 cut(s) | 2723 |
| BsaAI | YACGTR | 1 cut(s) | 554 |
| BsaBI | GATNNNNATC | 2 cut(s) | 585, 1961 |
| BsaHI | GRCGYC | 1 cut(s) | 2015 |
| BsaJI | CCNNGG | 9 cut(s) | 684, 906, 1161, 1505, 1938, 3270, 3271, 3428, 4380 |
| BsaWI | WCCGGW | 1 cut(s) | 2494 |
| Bse1I | ACTGG | 7 cut(s) | 270, 2623, 2883, 3290, 3395, 3923, 4577 |
| Bse21I | CCTNAGG | 1 cut(s) | 3105 |
| Bse3DI | GCAATG | 6 cut(s) | 192, 582, 678, 2796, 3328, 4357 |
| Bse8I | GATNNNNATC | 2 cut(s) | 585, 1961 |
| BseAI | TCCGGA | 1 cut(s) | 2494 |
| BseBI | CCWGG | 7 cut(s) | 685, 1162, 3144, 3272, 3902, 4200, 4437 |
| BseCI | ATCGAT | 1 cut(s) | 2723 |
| BseDI | CCNNGG | 9 cut(s) | 684, 906, 1161, 1505, 1938, 3270, 3271, 3428, 4380 |
| BseGI | GGATG | 9 cut(s) | 493, 2072, 2282, 2423, 2797, 3168, 3622, 3910, 4698 |
| BseJI | GATNNNNATC | 2 cut(s) | 585, 1961 |
| BseMI | GCAATG | 6 cut(s) | 192, 582, 678, 2796, 3328, 4357 |
| BseNI | ACTGG | 7 cut(s) | 270, 2623, 2883, 3290, 3395, 3923, 4577 |
| BseRI | GAGGAG | 4 cut(s) | 3093, 3758, 3761, 4227 |
| BseSI | GKGCMC | 3 cut(s) | 1257, 2123, 2380 |
| BseXI | GCAGC | 9 cut(s) | 604, 1930, 2071, 2157, 2318, 2876, 3680, 4241, 4645 |
| BseYI | CCCAGC | 3 cut(s) | 465, 3201, 3548 |
| BsgI | GTGCAG | 4 cut(s) | 290, 440, 1990, 2458 |
| Bsh1236I | CGCG | 3 cut(s) | 239, 3254, 3387 |
| Bsh1285I | CGRYCG | 2 cut(s) | 397, 3025 |
| BshFI | GGCC | 6 cut(s) | 1738, 2639, 2716, 3485, 4010, 4385 |
| BshNI | GGYRCC | 1 cut(s) | 2014 |
| BshVI | ATCGAT | 1 cut(s) | 2723 |
| BsiEI | CGRYCG | 2 cut(s) | 397, 3025 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1171, 1257, 1423, 1452, 2123, 2549 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| BsiSI | CCGG | 4 cut(s) | 1739, 2495, 2636, 3999 |
| BslFI | GGGAC | 6 cut(s) | 615, 1808, 2319, 2460, 3911, 4665 |
| BsmAI | GTCTC | 3 cut(s) | 2911, 3012, 4136 |
| BsmFI | GGGAC | 6 cut(s) | 615, 1808, 2319, 2460, 3911, 4665 |
| BsmI | GAATGC | 4 cut(s) | 287, 1072, 1344, 2148 |
| BsnI | GGCC | 6 cut(s) | 1738, 2639, 2716, 3485, 4010, 4385 |
| BsoBI | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1171, 1257, 1423, 1452, 2123, 2380, 2549, 4777 |
| Bsp13I | TCCGGA | 1 cut(s) | 2494 |
| Bsp1407I | TGTACA | 3 cut(s) | 2048, 3986, 4331 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3697 |
| Bsp19I | CCATGG | 1 cut(s) | 3428 |
| BspANI | GGCC | 6 cut(s) | 1738, 2639, 2716, 3485, 4010, 4385 |
| BspDI | ATCGAT | 1 cut(s) | 2723 |
| BspEI | TCCGGA | 1 cut(s) | 2494 |
| BspFNI | CGCG | 3 cut(s) | 239, 3254, 3387 |
| BspHI | TCATGA | 1 cut(s) | 4405 |
| BspLI | GGNNCC | 8 cut(s) | 1796, 2016, 3648, 3683, 3899, 4441, 4539, 4798 |
| BspMAI | CTGCAG | 1 cut(s) | 2866 |
| BspPI | GGATC | 4 cut(s) | 186, 426, 551, 1031 |
| BspQI | GCTCTTC | 1 cut(s) | 2846 |
| BspT107I | GGYRCC | 1 cut(s) | 2014 |
| BspTI | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| BsrBI | CCGCTC | 1 cut(s) | 1744 |
| BsrDI | GCAATG | 6 cut(s) | 192, 582, 678, 2796, 3328, 4357 |
| BsrGI | TGTACA | 3 cut(s) | 2048, 3986, 4331 |
| BsrI | ACTGG | 7 cut(s) | 270, 2623, 2883, 3290, 3395, 3923, 4577 |
| BssECI | CCNNGG | 9 cut(s) | 684, 906, 1161, 1505, 1938, 3270, 3271, 3428, 4380 |
| BssNI | GRCGYC | 1 cut(s) | 2015 |
| BssT1I | CCWWGG | 4 cut(s) | 906, 1505, 1938, 3428 |
| Bst2UI | CCWGG | 7 cut(s) | 685, 1162, 3144, 3272, 3902, 4200, 4437 |
| Bst6I | CTCTTC | 6 cut(s) | 22, 1061, 1089, 2846, 3830, 4098 |
| BstACI | GRCGYC | 1 cut(s) | 2015 |
| BstAFI | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1261 |
| BstAUI | TGTACA | 3 cut(s) | 2048, 3986, 4331 |
| BstBAI | YACGTR | 1 cut(s) | 554 |
| BstC8I | GCNNGC | 4 cut(s) | 1390, 2858, 2862, 4522 |
| BstDSI | CCRYGG | 2 cut(s) | 3428, 4380 |
| BstEII | GGTNACC | 1 cut(s) | 1754 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3951 |
| BstF5I | GGATG | 9 cut(s) | 493, 2072, 2282, 2423, 2797, 3168, 3622, 3910, 4698 |
| BstFNI | CGCG | 3 cut(s) | 239, 3254, 3387 |
| BstH2I | RGCGCY | 1 cut(s) | 2018 |
| BstHHI | GCGC | 5 cut(s) | 622, 2017, 2968, 3254, 4235 |
| BstMAI | GTCTC | 3 cut(s) | 2911, 3012, 4136 |
| BstMCI | CGRYCG | 2 cut(s) | 397, 3025 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 93, 1261, 2987, 3251, 3690, 4391, 4724 |
| BstNI | CCWGG | 7 cut(s) | 685, 1162, 3144, 3272, 3902, 4200, 4437 |
| BstNSI | RCATGY | 5 cut(s) | 1326, 1622, 1903, 3412, 4332 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1185, 1902 |
| BstPI | GGTNACC | 1 cut(s) | 1754 |
| BstSCI | CCNGG | 8 cut(s) | 683, 1160, 3142, 3270, 3900, 3997, 4198, 4435 |
| BstSFI | CTRYAG | 3 cut(s) | 1469, 2088, 2862 |
| BstSLI | GKGCMC | 3 cut(s) | 1257, 2123, 2380 |
| BstUI | CGCG | 3 cut(s) | 239, 3254, 3387 |
| BstV1I | GCAGC | 9 cut(s) | 604, 1930, 2071, 2157, 2318, 2876, 3680, 4241, 4645 |
| BstV2I | GAAGAC | 7 cut(s) | 43, 78, 2129, 2483, 3180, 3534, 4709 |
| BstX2I | RGATCY | 4 cut(s) | 178, 431, 543, 1704 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 112, 1197, 3216 |
| BstYI | RGATCY | 4 cut(s) | 178, 431, 543, 1704 |
| Bsu15I | ATCGAT | 1 cut(s) | 2723 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3105 |
| BsuI | GTATCC | 3 cut(s) | 907, 1540, 2608 |
| BsuRI | GGCC | 6 cut(s) | 1738, 2639, 2716, 3485, 4010, 4385 |
| BsuTUI | ATCGAT | 1 cut(s) | 2723 |
| BtgI | CCRYGG | 2 cut(s) | 3428, 4380 |
| BtrI | CACGTC | 1 cut(s) | 1118 |
| BtsCI | GGATG | 9 cut(s) | 493, 2072, 2282, 2423, 2797, 3168, 3622, 3910, 4698 |
| BtsI | GCAGTG | 4 cut(s) | 1399, 2262, 2410, 3715 |
| BtsIMutI | CAGTG | 9 cut(s) | 1399, 2007, 2121, 2262, 2410, 3477, 3508, 3715, 4584 |
| Cac8I | GCNNGC | 4 cut(s) | 1390, 2858, 2862, 4522 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2505 |
| CciI | TCATGA | 1 cut(s) | 4405 |
| CfoI | GCGC | 5 cut(s) | 622, 2017, 2968, 3254, 4235 |
| Cfr13I | GGNCC | 6 cut(s) | 4, 1795, 3898, 4008, 4151, 4784 |
| ClaI | ATCGAT | 1 cut(s) | 2723 |
| CseI | GACGC | 2 cut(s) | 1052, 1892 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 442, 477, 2040, 2075 |
| DinI | GGCGCC | 1 cut(s) | 2016 |
| DraI | TTTAAA | 1 cut(s) | 2586 |
| DraIII | CACNNNGTG | 3 cut(s) | 252, 1252, 1261 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4415 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4149 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4415 |
| EaeI | YGGCCR | 3 cut(s) | 1736, 2714, 4383 |
| Eam1104I | CTCTTC | 6 cut(s) | 22, 1061, 1089, 2846, 3830, 4098 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4149 |
| EarI | CTCTTC | 6 cut(s) | 22, 1061, 1089, 2846, 3830, 4098 |
| Ecl136II | GAGCTC | 3 cut(s) | 1169, 1421, 1450 |
| Eco130I | CCWWGG | 4 cut(s) | 906, 1505, 1938, 3428 |
| Eco24I | GRGCYC | 4 cut(s) | 1171, 1423, 1452, 4777 |
| Eco32I | GATATC | 3 cut(s) | 1318, 1489, 3019 |
| Eco47I | GGWCC | 5 cut(s) | 4, 1795, 3898, 4151, 4784 |
| Eco53kI | GAGCTC | 3 cut(s) | 1169, 1421, 1450 |
| Eco57I | CTGAAG | 9 cut(s) | 140, 739, 1057, 1650, 1693, 2285, 2798, 2870, 4167 |
| Eco81I | CCTNAGG | 1 cut(s) | 3105 |
| Eco88I | CYCGRG | 3 cut(s) | 1451, 2213, 2354 |
| Eco91I | GGTNACC | 1 cut(s) | 1754 |
| EcoICRI | GAGCTC | 3 cut(s) | 1169, 1421, 1450 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3951 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1795, 3898, 4151 |
| EcoO65I | GGTNACC | 1 cut(s) | 1754 |
| EcoRII | CCWGG | 7 cut(s) | 683, 1160, 3142, 3270, 3900, 4198, 4435 |
| EcoRV | GATATC | 3 cut(s) | 1318, 1489, 3019 |
| EcoT14I | CCWWGG | 4 cut(s) | 906, 1505, 1938, 3428 |
| EcoT38I | GRGCYC | 4 cut(s) | 1171, 1423, 1452, 4777 |
| EgeI | GGCGCC | 1 cut(s) | 2016 |
| EheI | GGCGCC | 1 cut(s) | 2016 |
| ErhI | CCWWGG | 4 cut(s) | 906, 1505, 1938, 3428 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2688, 2720, 4284, 4316, 4596, 4628 |
| FaqI | GGGAC | 6 cut(s) | 615, 1808, 2319, 2460, 3911, 4665 |
| FauI | CCCGC | 1 cut(s) | 3968 |
| FauNDI | CATATG | 2 cut(s) | 1684, 2154 |
| FbaI | TGATCA | 1 cut(s) | 718 |
| FokI | GGATG | 9 cut(s) | 500, 2059, 2269, 2410, 2804, 3155, 3629, 3917, 4705 |
| FriOI | GRGCYC | 4 cut(s) | 1171, 1423, 1452, 4777 |
| FspAI | RTGCGCAY | 1 cut(s) | 2967 |
| FspBI | CTAG | 8 cut(s) | 860, 878, 981, 998, 1238, 1286, 1313, 4337 |
| FspI | TGCGCA | 1 cut(s) | 2967 |
| GlaI | GCGC | 5 cut(s) | 621, 2016, 2967, 3253, 4234 |
| GsaI | CCCAGC | 3 cut(s) | 469, 3205, 3552 |
| GsuI | CTGGAG | 1 cut(s) | 448 |
| HaeII | RGCGCY | 1 cut(s) | 2018 |
| HaeIII | GGCC | 6 cut(s) | 1738, 2639, 2716, 3485, 4010, 4385 |
| HapII | CCGG | 4 cut(s) | 1739, 2495, 2636, 3999 |
| HgaI | GACGC | 2 cut(s) | 1052, 1892 |
| HhaI | GCGC | 5 cut(s) | 622, 2017, 2968, 3254, 4235 |
| Hin1I | GRCGYC | 1 cut(s) | 2015 |
| Hin6I | GCGC | 5 cut(s) | 620, 2015, 2966, 3252, 4233 |
| HinP1I | GCGC | 5 cut(s) | 620, 2015, 2966, 3252, 4233 |
| HincII | GTYRAC | 4 cut(s) | 820, 1891, 4110, 4609 |
| HindII | GTYRAC | 4 cut(s) | 820, 1891, 4110, 4609 |
| HindIII | AAGCTT | 6 cut(s) | 206, 372, 1273, 1632, 2021, 2657 |
| HpaI | GTTAAC | 1 cut(s) | 4609 |
| HpaII | CCGG | 4 cut(s) | 1739, 2495, 2636, 3999 |
| HphI | GGTGA | 8 cut(s) | 713, 1238, 1457, 3674, 4186, 4416, 4425, 4581 |
| Hpy99I | CGWCG | 1 cut(s) | 1775 |
| HpyCH4IV | ACGT | 3 cut(s) | 553, 943, 1117 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 93, 1261, 2987, 3251, 3690, 4391, 4724 |
| HpySE526I | ACGT | 3 cut(s) | 553, 943, 1117 |
| Hsp92I | GRCGYC | 1 cut(s) | 2015 |
| HspAI | GCGC | 5 cut(s) | 620, 2015, 2966, 3252, 4233 |
| KasI | GGCGCC | 1 cut(s) | 2014 |
| Kpn2I | TCCGGA | 1 cut(s) | 2494 |
| Ksp22I | TGATCA | 1 cut(s) | 718 |
| KspAI | GTTAAC | 1 cut(s) | 4609 |
| LguI | GCTCTTC | 1 cut(s) | 2846 |
| Lsp1109I | GCAGC | 9 cut(s) | 604, 1930, 2071, 2157, 2318, 2876, 3680, 4241, 4645 |
| MaeI | CTAG | 8 cut(s) | 860, 878, 981, 998, 1238, 1286, 1313, 4337 |
| MaeII | ACGT | 3 cut(s) | 553, 943, 1117 |
| MbiI | CCGCTC | 1 cut(s) | 1744 |
| MfeI | CAATTG | 4 cut(s) | 2289, 2430, 2900, 4671 |
| MflI | RGATCY | 4 cut(s) | 178, 431, 543, 1704 |
| MhlI | GDGCHC | 8 cut(s) | 1171, 1257, 1423, 1452, 2123, 2380, 2549, 4777 |
| MlsI | TGGCCA | 2 cut(s) | 2716, 4385 |
| MluNI | TGGCCA | 2 cut(s) | 2716, 4385 |
| Mly113I | GGCGCC | 1 cut(s) | 2015 |
| MlyI | GAGTC | 4 cut(s) | 1598, 2143, 4227, 4594 |
| Mox20I | TGGCCA | 2 cut(s) | 2716, 4385 |
| MroI | TCCGGA | 1 cut(s) | 2494 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1070, 1362, 1539, 2298, 2439, 2895 |
| MscI | TGGCCA | 2 cut(s) | 2716, 4385 |
| MslI | CAYNNNNRTG | 8 cut(s) | 845, 1176, 1195, 1623, 1788, 2153, 3413, 4691 |
| Msp20I | TGGCCA | 2 cut(s) | 2716, 4385 |
| MspA1I | CMGCKG | 4 cut(s) | 617, 2084, 3055, 3701 |
| MspCI | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| MspI | CCGG | 4 cut(s) | 1739, 2495, 2636, 3999 |
| MspR9I | CCNGG | 8 cut(s) | 685, 1162, 3144, 3272, 3902, 3999, 4200, 4437 |
| MunI | CAATTG | 4 cut(s) | 2289, 2430, 2900, 4671 |
| Mva1269I | GAATGC | 4 cut(s) | 287, 1072, 1344, 2148 |
| MvaI | CCWGG | 7 cut(s) | 685, 1162, 3144, 3272, 3902, 4200, 4437 |
| MvnI | CGCG | 3 cut(s) | 239, 3254, 3387 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 93, 1261, 2987, 3251, 3690, 4391, 4724 |
| NarI | GGCGCC | 1 cut(s) | 2015 |
| NciI | CCSGG | 1 cut(s) | 3999 |
| NcoI | CCATGG | 1 cut(s) | 3428 |
| NdeI | CATATG | 2 cut(s) | 1684, 2154 |
| NlaIV | GGNNCC | 8 cut(s) | 1796, 2016, 3648, 3683, 3899, 4441, 4539, 4798 |
| NmuCI | GTSAC | 6 cut(s) | 1178, 3563, 3716, 3728, 3858, 4747 |
| NsbI | TGCGCA | 1 cut(s) | 2967 |
| NspI | RCATGY | 5 cut(s) | 1326, 1622, 1903, 3412, 4332 |
| PaeR7I | CTCGAG | 1 cut(s) | 1451 |
| PagI | TCATGA | 1 cut(s) | 4405 |
| PasI | CCCWGGG | 1 cut(s) | 3271 |
| PciI | ACATGT | 3 cut(s) | 1618, 3408, 4328 |
| PciSI | GCTCTTC | 1 cut(s) | 2846 |
| PctI | GAATGC | 4 cut(s) | 287, 1072, 1344, 2148 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1070, 1362, 1539, 2298, 2439, 2895 |
| PflFI | GACNNNGTC | 1 cut(s) | 4708 |
| PfoI | TCCNGGA | 1 cut(s) | 3142 |
| PleI | GAGTC | 4 cut(s) | 1598, 2142, 4226, 4594 |
| PluTI | GGCGCC | 1 cut(s) | 2018 |
| PpsI | GAGTC | 4 cut(s) | 1598, 2142, 4226, 4594 |
| Ppu21I | YACGTR | 1 cut(s) | 554 |
| PpuMI | RGGWCCY | 3 cut(s) | 1795, 3898, 4151 |
| PscI | ACATGT | 3 cut(s) | 1618, 3408, 4328 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1185, 1902 |
| PshBI | ATTAAT | 1 cut(s) | 3447 |
| PsiI | TTATAA | 1 cut(s) | 4646 |
| Psp124BI | GAGCTC | 3 cut(s) | 1171, 1423, 1452 |
| Psp1406I | AACGTT | 1 cut(s) | 943 |
| Psp5II | RGGWCCY | 3 cut(s) | 1795, 3898, 4151 |
| Psp6I | CCWGG | 7 cut(s) | 683, 1160, 3142, 3270, 3900, 4198, 4435 |
| PspEI | GGTNACC | 1 cut(s) | 1754 |
| PspFI | CCCAGC | 3 cut(s) | 465, 3201, 3548 |
| PspGI | CCWGG | 7 cut(s) | 683, 1160, 3142, 3270, 3900, 4198, 4435 |
| PspN4I | GGNNCC | 8 cut(s) | 1796, 2016, 3648, 3683, 3899, 4441, 4539, 4798 |
| PspPI | GGNCC | 6 cut(s) | 4, 1795, 3898, 4008, 4151, 4784 |
| PspPPI | RGGWCCY | 3 cut(s) | 1795, 3898, 4151 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3639, 3671 |
| PstI | CTGCAG | 1 cut(s) | 2866 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2505 |
| PsuI | RGATCY | 4 cut(s) | 178, 431, 543, 1704 |
| PsyI | GACNNNGTC | 1 cut(s) | 4708 |
| PvuII | CAGCTG | 3 cut(s) | 2084, 3055, 3701 |
| RseI | CAYNNNNRTG | 8 cut(s) | 845, 1176, 1195, 1623, 1788, 2153, 3413, 4691 |
| SacI | GAGCTC | 3 cut(s) | 1171, 1423, 1452 |
| SapI | GCTCTTC | 1 cut(s) | 2846 |
| Sau96I | GGNCC | 6 cut(s) | 4, 1795, 3898, 4008, 4151, 4784 |
| ScaI | AGTACT | 1 cut(s) | 996 |
| SchI | GAGTC | 4 cut(s) | 1598, 2143, 4227, 4594 |
| ScrFI | CCNGG | 8 cut(s) | 685, 1162, 3144, 3272, 3902, 3999, 4200, 4437 |
| SduI | GDGCHC | 8 cut(s) | 1171, 1257, 1423, 1452, 2123, 2380, 2549, 4777 |
| SfcI | CTRYAG | 3 cut(s) | 1469, 2088, 2862 |
| SfoI | GGCGCC | 1 cut(s) | 2016 |
| Sfr274I | CTCGAG | 1 cut(s) | 1451 |
| SinI | GGWCC | 5 cut(s) | 4, 1795, 3898, 4151, 4784 |
| SlaI | CTCGAG | 1 cut(s) | 1451 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 845, 1176, 1195, 1623, 1788, 2153, 3413, 4691 |
| SspDI | GGCGCC | 1 cut(s) | 2014 |
| SspI | AATATT | 2 cut(s) | 3364, 3540 |
| SspMI | CTAG | 8 cut(s) | 860, 878, 981, 998, 1238, 1286, 1313, 4337 |
| SstI | GAGCTC | 3 cut(s) | 1171, 1423, 1452 |
| StyD4I | CCNGG | 8 cut(s) | 683, 1160, 3142, 3270, 3900, 3997, 4198, 4435 |
| StyI | CCWWGG | 4 cut(s) | 906, 1505, 1938, 3428 |
| TaiI | ACGT | 3 cut(s) | 556, 946, 1120 |
| TaqII | GACCGA | 1 cut(s) | 3011 |
| TatI | WGTACW | 7 cut(s) | 772, 994, 2048, 2738, 3986, 4273, 4331 |
| TauI | GCSGC | 2 cut(s) | 452, 663 |
| TscAI | CASTG | 9 cut(s) | 1399, 2014, 2128, 2269, 2410, 3484, 3515, 3715, 4584 |
| TseFI | GTSAC | 6 cut(s) | 1178, 3563, 3716, 3728, 3858, 4747 |
| TseI | GCWGC | 9 cut(s) | 617, 1943, 2084, 2145, 2331, 2864, 3693, 4254, 4633 |
| Tsp45I | GTSAC | 6 cut(s) | 1178, 3563, 3716, 3728, 3858, 4747 |
| TspGWI | ACGGA | 3 cut(s) | 3181, 3977, 4369 |
| TspRI | CASTG | 9 cut(s) | 1399, 2014, 2128, 2269, 2410, 3484, 3515, 3715, 4584 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4708 |
| Vha464I | CTTAAG | 6 cut(s) | 155, 457, 1111, 1988, 2129, 2249 |
| VneI | GTGCAC | 2 cut(s) | 1253, 2119 |
| VpaK11BI | GGWCC | 5 cut(s) | 4, 1795, 3898, 4151, 4784 |
| VspI | ATTAAT | 1 cut(s) | 3447 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3951 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 5 cut(s) | 1326, 1622, 1903, 3412, 4332 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2875, 3638 |
| XhoI | CTCGAG | 1 cut(s) | 1451 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1070, 1362, 1539, 2298, 2439, 2895 |
| XspI | CTAG | 8 cut(s) | 860, 878, 981, 998, 1238, 1286, 1313, 4337 |
| ZrmI | AGTACT | 1 cut(s) | 996 |