TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2105, 2222 |
| Acc16I | TGCGCA | 1 cut(s) | 1442 |
| AccB1I | GGYRCC | 1 cut(s) | 1933 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1119, 1900, 2488 |
| AccBSI | CCGCTC | 2 cut(s) | 1612, 2060 |
| AccII | CGCG | 2 cut(s) | 354, 525 |
| AciI | CCGC | 5 cut(s) | 392, 523, 801, 1610, 2058 |
| AclI | AACGTT | 1 cut(s) | 2025 |
| AclWI | GGATC | 7 cut(s) | 818, 851, 864, 1953, 1962, 2412, 2425 |
| AcoI | YGGCCR | 1 cut(s) | 1717 |
| AcuI | CTGAAG | 4 cut(s) | 754, 995, 1539, 2293 |
| AfaI | GTAC | 6 cut(s) | 131, 285, 674, 1162, 2442, 2649 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1119, 1409, 1827, 1900, 2488, 2636 |
| AflII | CTTAAG | 1 cut(s) | 2281 |
| AflIII | ACRYGT | 2 cut(s) | 1377, 1418 |
| AgeI | ACCGGT | 2 cut(s) | 631, 1435 |
| AhlI | ACTAGT | 1 cut(s) | 2650 |
| AjiI | CACGTC | 1 cut(s) | 1872 |
| AjnI | CCWGG | 2 cut(s) | 1524, 1595 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2163, 2195 |
| Alw21I | GWGCWC | 1 cut(s) | 1806 |
| Alw26I | GTCTC | 2 cut(s) | 572, 2363 |
| AlwI | GGATC | 7 cut(s) | 818, 851, 864, 1953, 1962, 2412, 2425 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1900 |
| Ama87I | CYCGRG | 2 cut(s) | 1825, 1976 |
| AoxI | GGCC | 3 cut(s) | 467, 1411, 1717 |
| ApeKI | GCWGC | 5 cut(s) | 106, 651, 947, 1619, 2188 |
| AsiGI | ACCGGT | 2 cut(s) | 631, 1435 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1229, 1776, 2790 |
| AspLEI | GCGC | 2 cut(s) | 354, 1443 |
| AspS9I | GGNCC | 4 cut(s) | 1255, 1411, 1607, 2055 |
| AsuHPI | GGTGA | 1 cut(s) | 200 |
| AsuII | TTCGAA | 1 cut(s) | 1780 |
| AvaI | CYCGRG | 2 cut(s) | 1825, 1976 |
| AvaII | GGWCC | 3 cut(s) | 1255, 1607, 2055 |
| BaeGI | GKGCMC | 1 cut(s) | 1400 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1062, 1095 |
| BamHI | GGATCC | 2 cut(s) | 856, 2417 |
| BanI | GGYRCC | 1 cut(s) | 1933 |
| BanII | GRGCYC | 1 cut(s) | 1806 |
| BauI | CACGAG | 1 cut(s) | 207 |
| BbsI | GAAGAC | 2 cut(s) | 1527, 1701 |
| Bbv12I | GWGCWC | 1 cut(s) | 1806 |
| BbvI | GCAGC | 5 cut(s) | 118, 663, 959, 1606, 2200 |
| BccI | CCATC | 7 cut(s) | 178, 1382, 1728, 1760, 2516, 2575, 2718 |
| BciT130I | CCWGG | 2 cut(s) | 1526, 1597 |
| BciVI | GTATCC | 1 cut(s) | 1906 |
| BclI | TGATCA | 1 cut(s) | 253 |
| BcoDI | GTCTC | 2 cut(s) | 572, 2363 |
| BcuI | ACTAGT | 1 cut(s) | 2650 |
| BfaI | CTAG | 3 cut(s) | 2528, 2555, 2651 |
| BfmI | CTRYAG | 1 cut(s) | 2067 |
| BfrI | CTTAAG | 1 cut(s) | 2281 |
| BfuI | GTATCC | 1 cut(s) | 1906 |
| BglII | AGATCT | 1 cut(s) | 1707 |
| BisI | GCNGC | 5 cut(s) | 107, 652, 948, 1620, 2189 |
| BlsI | GCNGC | 5 cut(s) | 108, 653, 949, 1621, 2190 |
| BmcAI | AGTACT | 1 cut(s) | 2649 |
| Bme1390I | CCNGG | 2 cut(s) | 1526, 1597 |
| Bme18I | GGWCC | 3 cut(s) | 1255, 1607, 2055 |
| BmeT110I | CYCGRG | 2 cut(s) | 1825, 1976 |
| BmgBI | CACGTC | 1 cut(s) | 1872 |
| BmgT120I | GGNCC | 4 cut(s) | 1255, 1411, 1607, 2055 |
| BmiI | GGNNCC | 5 cut(s) | 433, 858, 1560, 1935, 2419 |
| BmrFI | CCNGG | 2 cut(s) | 1526, 1597 |
| BmrI | ACTGGG | 1 cut(s) | 206 |
| BmsI | GCATC | 5 cut(s) | 646, 755, 1263, 1307, 2688 |
| BmuI | ACTGGG | 1 cut(s) | 206 |
| BpiI | GAAGAC | 2 cut(s) | 1527, 1701 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2044, 2076 |
| BpmI | CTGGAG | 1 cut(s) | 2071 |
| Bpu14I | TTCGAA | 1 cut(s) | 1780 |
| BpuEI | CTTGAG | 4 cut(s) | 254, 256, 279, 2714 |
| Bsa29I | ATCGAT | 2 cut(s) | 1835, 1957 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1712, 2352, 2793 |
| BsaJI | CCNNGG | 2 cut(s) | 1595, 1596 |
| BsaWI | WCCGGW | 3 cut(s) | 631, 1435, 2083 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 903, 933, 2244, 2274, 2637, 2667 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1119, 1409, 1827, 1900, 2488, 2636 |
| Bse118I | RCCGGY | 4 cut(s) | 631, 753, 1402, 1435 |
| Bse1I | ACTGG | 3 cut(s) | 201, 1389, 1905 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1712, 2352, 2793 |
| BseBI | CCWGG | 2 cut(s) | 1526, 1597 |
| BseCI | ATCGAT | 2 cut(s) | 1835, 1957 |
| BseDI | CCNNGG | 2 cut(s) | 1595, 1596 |
| BseJI | GATNNNNATC | 3 cut(s) | 1712, 2352, 2793 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1119, 1409, 1827, 1900, 2488, 2636 |
| BseMII | CTCAG | 1 cut(s) | 193 |
| BseNI | ACTGG | 3 cut(s) | 201, 1389, 1905 |
| BseRI | GAGGAG | 3 cut(s) | 915, 924, 1316 |
| BseSI | GKGCMC | 1 cut(s) | 1400 |
| BseXI | GCAGC | 5 cut(s) | 118, 663, 959, 1606, 2200 |
| BseYI | CCCAGC | 2 cut(s) | 827, 2481 |
| BsgI | GTGCAG | 1 cut(s) | 2063 |
| Bsh1236I | CGCG | 2 cut(s) | 354, 525 |
| BshFI | GGCC | 3 cut(s) | 469, 1413, 1719 |
| BshNI | GGYRCC | 1 cut(s) | 1933 |
| BshTI | ACCGGT | 2 cut(s) | 631, 1435 |
| BshVI | ATCGAT | 2 cut(s) | 1835, 1957 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1806 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1825, 1976 |
| BsiSI | CCGG | 6 cut(s) | 466, 632, 754, 1403, 1436, 2084 |
| BslFI | GGGAC | 1 cut(s) | 1186 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1119, 1409, 1827, 1900, 2488, 2636 |
| BsmAI | GTCTC | 2 cut(s) | 572, 2363 |
| BsmBI | CGTCTC | 1 cut(s) | 2363 |
| BsmFI | GGGAC | 1 cut(s) | 1186 |
| BsmI | GAATGC | 3 cut(s) | 653, 1910, 2191 |
| BsnI | GGCC | 3 cut(s) | 469, 1413, 1719 |
| BsoBI | CYCGRG | 2 cut(s) | 1825, 1976 |
| Bsp119I | TTCGAA | 1 cut(s) | 1780 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1400, 1806 |
| Bsp143I | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| BspACI | CCGC | 5 cut(s) | 392, 523, 801, 1610, 2058 |
| BspANI | GGCC | 3 cut(s) | 469, 1413, 1719 |
| BspCNI | CTCAG | 1 cut(s) | 192 |
| BspDI | ATCGAT | 2 cut(s) | 1835, 1957 |
| BspFNI | CGCG | 2 cut(s) | 354, 525 |
| BspHI | TCATGA | 2 cut(s) | 963, 1249 |
| BspLI | GGNNCC | 5 cut(s) | 433, 858, 1560, 1935, 2419 |
| BspPI | GGATC | 7 cut(s) | 818, 851, 864, 1953, 1962, 2412, 2425 |
| BspQI | GCTCTTC | 2 cut(s) | 1619, 1767 |
| BspT104I | TTCGAA | 1 cut(s) | 1780 |
| BspT107I | GGYRCC | 1 cut(s) | 1933 |
| BspTI | CTTAAG | 1 cut(s) | 2281 |
| BsrBI | CCGCTC | 2 cut(s) | 1612, 2060 |
| BsrFI | RCCGGY | 4 cut(s) | 631, 753, 1402, 1435 |
| BsrI | ACTGG | 3 cut(s) | 201, 1389, 1905 |
| BssAI | RCCGGY | 4 cut(s) | 631, 753, 1402, 1435 |
| BssECI | CCNNGG | 2 cut(s) | 1595, 1596 |
| BssMI | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| BssSI | CACGAG | 1 cut(s) | 207 |
| Bst2BI | CACGAG | 1 cut(s) | 207 |
| Bst2UI | CCWGG | 2 cut(s) | 1526, 1597 |
| Bst4CI | ACNGT | 2 cut(s) | 349, 494 |
| Bst6I | CTCTTC | 5 cut(s) | 357, 901, 1619, 1767, 2312 |
| BstAFI | CTTAAG | 1 cut(s) | 2281 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2369 |
| BstBI | TTCGAA | 1 cut(s) | 1780 |
| BstC8I | GCNNGC | 4 cut(s) | 572, 755, 2370, 2382 |
| BstDEI | CTNAG | 3 cut(s) | 179, 2246, 2507 |
| BstEII | GGTNACC | 1 cut(s) | 188 |
| BstFNI | CGCG | 2 cut(s) | 354, 525 |
| BstHHI | GCGC | 2 cut(s) | 354, 1443 |
| BstKTI | GATC | 8 cut(s) | 256, 826, 859, 1710, 1957, 1961, 2356, 2420 |
| BstMAI | GTCTC | 2 cut(s) | 572, 2363 |
| BstMBI | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 265, 274, 2369 |
| BstNI | CCWGG | 2 cut(s) | 1526, 1597 |
| BstNSI | RCATGY | 5 cut(s) | 148, 944, 1381, 1422, 2384 |
| BstPI | GGTNACC | 1 cut(s) | 188 |
| BstSCI | CCNGG | 2 cut(s) | 1524, 1595 |
| BstSFI | CTRYAG | 1 cut(s) | 2067 |
| BstSLI | GKGCMC | 1 cut(s) | 1400 |
| BstUI | CGCG | 2 cut(s) | 354, 525 |
| BstV1I | GCAGC | 5 cut(s) | 118, 663, 959, 1606, 2200 |
| BstV2I | GAAGAC | 2 cut(s) | 1527, 1701 |
| BstX2I | RGATCY | 3 cut(s) | 856, 1707, 2417 |
| BstYI | RGATCY | 3 cut(s) | 856, 1707, 2417 |
| Bsu15I | ATCGAT | 2 cut(s) | 1835, 1957 |
| BsuI | GTATCC | 1 cut(s) | 1906 |
| BsuRI | GGCC | 3 cut(s) | 469, 1413, 1719 |
| BsuTUI | ATCGAT | 2 cut(s) | 1835, 1957 |
| BtgZI | GCGATG | 1 cut(s) | 669 |
| BtrI | CACGTC | 1 cut(s) | 1872 |
| BtsI | GCAGTG | 1 cut(s) | 1293 |
| BtsIMutI | CAGTG | 5 cut(s) | 194, 794, 819, 1293, 1382 |
| Cac8I | GCNNGC | 4 cut(s) | 572, 755, 2370, 2382 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1900 |
| CciI | TCATGA | 2 cut(s) | 963, 1249 |
| CfoI | GCGC | 2 cut(s) | 354, 1443 |
| Cfr10I | RCCGGY | 4 cut(s) | 631, 753, 1402, 1435 |
| Cfr13I | GGNCC | 4 cut(s) | 1255, 1411, 1607, 2055 |
| ClaI | ATCGAT | 2 cut(s) | 1835, 1957 |
| CseI | GACGC | 1 cut(s) | 1058 |
| CsiI | ACCWGGT | 1 cut(s) | 1524 |
| Csp6I | GTAC | 6 cut(s) | 130, 284, 673, 1161, 2441, 2648 |
| CspAI | ACCGGT | 2 cut(s) | 631, 1435 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1389, 1424 |
| CviQI | GTAC | 6 cut(s) | 130, 284, 673, 1161, 2441, 2648 |
| DdeI | CTNAG | 3 cut(s) | 179, 2246, 2507 |
| DpnI | GATC | 8 cut(s) | 255, 825, 858, 1709, 1956, 1960, 2355, 2419 |
| DpnII | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| DraI | TTTAAA | 1 cut(s) | 2575 |
| EaeI | YGGCCR | 1 cut(s) | 1717 |
| Eam1104I | CTCTTC | 5 cut(s) | 357, 901, 1619, 1767, 2312 |
| EarI | CTCTTC | 5 cut(s) | 357, 901, 1619, 1767, 2312 |
| Ecl136II | GAGCTC | 1 cut(s) | 1804 |
| Eco24I | GRGCYC | 1 cut(s) | 1806 |
| Eco32I | GATATC | 1 cut(s) | 781 |
| Eco47I | GGWCC | 3 cut(s) | 1255, 1607, 2055 |
| Eco53kI | GAGCTC | 1 cut(s) | 1804 |
| Eco57I | CTGAAG | 4 cut(s) | 754, 995, 1539, 2293 |
| Eco88I | CYCGRG | 2 cut(s) | 1825, 1976 |
| Eco91I | GGTNACC | 1 cut(s) | 188 |
| EcoICRI | GAGCTC | 1 cut(s) | 1804 |
| EcoO65I | GGTNACC | 1 cut(s) | 188 |
| EcoRI | GAATTC | 2 cut(s) | 402, 2493 |
| EcoRII | CCWGG | 2 cut(s) | 1524, 1595 |
| EcoRV | GATATC | 1 cut(s) | 781 |
| EcoT22I | ATGCAT | 2 cut(s) | 1910, 2703 |
| EcoT38I | GRGCYC | 1 cut(s) | 1806 |
| Esp3I | CGTCTC | 1 cut(s) | 2363 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 599, 631, 968, 1000, 2163, 2195 |
| FaqI | GGGAC | 1 cut(s) | 1186 |
| FauI | CCCGC | 2 cut(s) | 399, 530 |
| FauNDI | CATATG | 1 cut(s) | 64 |
| FbaI | TGATCA | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 5 cut(s) | 107, 652, 948, 1620, 2189 |
| FriOI | GRGCYC | 1 cut(s) | 1806 |
| Fsp4HI | GCNGC | 5 cut(s) | 107, 652, 948, 1620, 2189 |
| FspAI | RTGCGCAY | 1 cut(s) | 1442 |
| FspBI | CTAG | 3 cut(s) | 2528, 2555, 2651 |
| FspI | TGCGCA | 1 cut(s) | 1442 |
| GlaI | GCGC | 2 cut(s) | 353, 1442 |
| GluI | GCNGC | 5 cut(s) | 107, 652, 948, 1620, 2189 |
| GsaI | CCCAGC | 2 cut(s) | 831, 2485 |
| GsuI | CTGGAG | 1 cut(s) | 2071 |
| HaeIII | GGCC | 3 cut(s) | 469, 1413, 1719 |
| HapII | CCGG | 6 cut(s) | 466, 632, 754, 1403, 1436, 2084 |
| HgaI | GACGC | 1 cut(s) | 1058 |
| HhaI | GCGC | 2 cut(s) | 354, 1443 |
| Hin6I | GCGC | 2 cut(s) | 352, 1441 |
| HinP1I | GCGC | 2 cut(s) | 352, 1441 |
| HincII | GTYRAC | 4 cut(s) | 813, 1375, 2152, 2656 |
| HindII | GTYRAC | 4 cut(s) | 813, 1375, 2152, 2656 |
| HindIII | AAGCTT | 2 cut(s) | 568, 1995 |
| HpaI | GTTAAC | 2 cut(s) | 1375, 2656 |
| HpaII | CCGG | 6 cut(s) | 466, 632, 754, 1403, 1436, 2084 |
| HphI | GGTGA | 1 cut(s) | 200 |
| Hpy166II | GTNNAC | 7 cut(s) | 813, 1110, 1375, 2152, 2441, 2656, 2737 |
| Hpy8I | GTNNAC | 7 cut(s) | 813, 1110, 1375, 2152, 2441, 2656, 2737 |
| Hpy99I | CGWCG | 2 cut(s) | 1545, 1873 |
| HpyAV | CCTTC | 7 cut(s) | 663, 1768, 2029, 2112, 2332, 2505, 2536 |
| HpyCH4III | ACNGT | 2 cut(s) | 349, 494 |
| HpyCH4IV | ACGT | 5 cut(s) | 1077, 1356, 1871, 2025, 2148 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 265, 274, 2369 |
| HpyF3I | CTNAG | 3 cut(s) | 179, 2246, 2507 |
| HpySE526I | ACGT | 5 cut(s) | 1077, 1356, 1871, 2025, 2148 |
| HspAI | GCGC | 2 cut(s) | 352, 1441 |
| KroI | GCCGGC | 1 cut(s) | 753 |
| KroNI | GCCGGC | 1 cut(s) | 755 |
| Ksp22I | TGATCA | 1 cut(s) | 253 |
| KspAI | GTTAAC | 2 cut(s) | 1375, 2656 |
| Kzo9I | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| LguI | GCTCTTC | 2 cut(s) | 1619, 1767 |
| LmnI | GCTCC | 8 cut(s) | 326, 836, 1265, 1564, 1801, 1809, 2252, 2514 |
| Lsp1109I | GCAGC | 5 cut(s) | 118, 663, 959, 1606, 2200 |
| LweI | GCATC | 5 cut(s) | 646, 755, 1263, 1307, 2688 |
| MabI | ACCWGGT | 1 cut(s) | 1524 |
| MaeI | CTAG | 3 cut(s) | 2528, 2555, 2651 |
| MaeII | ACGT | 5 cut(s) | 1077, 1356, 1871, 2025, 2148 |
| MaeIII | GTNAC | 9 cut(s) | 188, 459, 488, 890, 1046, 1380, 1513, 2241, 2596 |
| MalI | GATC | 8 cut(s) | 255, 825, 858, 1709, 1956, 1960, 2355, 2419 |
| MbiI | CCGCTC | 2 cut(s) | 1612, 2060 |
| MboI | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| MfeI | CAATTG | 1 cut(s) | 31 |
| MflI | RGATCY | 3 cut(s) | 856, 1707, 2417 |
| MhlI | GDGCHC | 2 cut(s) | 1400, 1806 |
| MlyI | GAGTC | 4 cut(s) | 1115, 1171, 1817, 2765 |
| MmeI | TCCRAC | 3 cut(s) | 226, 476, 1523 |
| Mph1103I | ATGCAT | 2 cut(s) | 1910, 2703 |
| MroNI | GCCGGC | 1 cut(s) | 753 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1229, 1776, 2790 |
| MslI | CAYNNNNRTG | 3 cut(s) | 48, 962, 2385 |
| MspA1I | CMGCKG | 1 cut(s) | 259 |
| MspCI | CTTAAG | 1 cut(s) | 2281 |
| MspI | CCGG | 6 cut(s) | 466, 632, 754, 1403, 1436, 2084 |
| MspR9I | CCNGG | 2 cut(s) | 1526, 1597 |
| MunI | CAATTG | 1 cut(s) | 31 |
| Mva1269I | GAATGC | 3 cut(s) | 653, 1910, 2191 |
| MvaI | CCWGG | 2 cut(s) | 1526, 1597 |
| MvnI | CGCG | 2 cut(s) | 354, 525 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 265, 274, 2369 |
| NaeI | GCCGGC | 1 cut(s) | 755 |
| NdeI | CATATG | 1 cut(s) | 64 |
| NdeII | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| NgoMIV | GCCGGC | 1 cut(s) | 753 |
| NlaIV | GGNNCC | 5 cut(s) | 433, 858, 1560, 1935, 2419 |
| NmuCI | GTSAC | 6 cut(s) | 188, 459, 488, 890, 1046, 1380 |
| NsbI | TGCGCA | 1 cut(s) | 1442 |
| NsiI | ATGCAT | 2 cut(s) | 1910, 2703 |
| NspI | RCATGY | 5 cut(s) | 148, 944, 1381, 1422, 2384 |
| NspV | TTCGAA | 1 cut(s) | 1780 |
| PaeI | GCATGC | 1 cut(s) | 2384 |
| PaeR7I | CTCGAG | 2 cut(s) | 1825, 1976 |
| PagI | TCATGA | 2 cut(s) | 963, 1249 |
| PasI | CCCWGGG | 1 cut(s) | 1596 |
| PciI | ACATGT | 2 cut(s) | 1377, 1418 |
| PciSI | GCTCTTC | 2 cut(s) | 1619, 1767 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1832 |
| PctI | GAATGC | 3 cut(s) | 653, 1910, 2191 |
| PdiI | GCCGGC | 1 cut(s) | 755 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1229, 1776, 2790 |
| PfeI | GAWTC | 9 cut(s) | 262, 387, 1334, 1474, 1738, 2092, 2214, 2534, 2744 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1119, 1900, 2488 |
| PinAI | ACCGGT | 2 cut(s) | 631, 1435 |
| PkrI | GCNGC | 5 cut(s) | 108, 653, 949, 1621, 2190 |
| PleI | GAGTC | 4 cut(s) | 1114, 1171, 1817, 2764 |
| PpsI | GAGTC | 4 cut(s) | 1114, 1171, 1817, 2764 |
| PscI | ACATGT | 2 cut(s) | 1377, 1418 |
| PsiI | TTATAA | 2 cut(s) | 2105, 2222 |
| Psp124BI | GAGCTC | 1 cut(s) | 1806 |
| Psp1406I | AACGTT | 1 cut(s) | 2025 |
| Psp6I | CCWGG | 2 cut(s) | 1524, 1595 |
| PspEI | GGTNACC | 1 cut(s) | 188 |
| PspFI | CCCAGC | 2 cut(s) | 827, 2481 |
| PspGI | CCWGG | 2 cut(s) | 1524, 1595 |
| PspN4I | GGNNCC | 5 cut(s) | 433, 858, 1560, 1935, 2419 |
| PspPI | GGNCC | 4 cut(s) | 1255, 1411, 1607, 2055 |
| PspXI | VCTCGAGB | 2 cut(s) | 1825, 1976 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1900 |
| PsuI | RGATCY | 3 cut(s) | 856, 1707, 2417 |
| PvuII | CAGCTG | 1 cut(s) | 259 |
| RsaI | GTAC | 6 cut(s) | 131, 285, 674, 1162, 2442, 2649 |
| RsaNI | GTAC | 6 cut(s) | 130, 284, 673, 1161, 2441, 2648 |
| RseI | CAYNNNNRTG | 3 cut(s) | 48, 962, 2385 |
| SacI | GAGCTC | 1 cut(s) | 1806 |
| SapI | GCTCTTC | 2 cut(s) | 1619, 1767 |
| SatI | GCNGC | 5 cut(s) | 107, 652, 948, 1620, 2189 |
| Sau3AI | GATC | 8 cut(s) | 253, 823, 856, 1707, 1954, 1958, 2353, 2417 |
| Sau96I | GGNCC | 4 cut(s) | 1255, 1411, 1607, 2055 |
| ScaI | AGTACT | 1 cut(s) | 2649 |
| SchI | GAGTC | 4 cut(s) | 1115, 1171, 1817, 2765 |
| ScrFI | CCNGG | 2 cut(s) | 1526, 1597 |
| SduI | GDGCHC | 2 cut(s) | 1400, 1806 |
| SexAI | ACCWGGT | 1 cut(s) | 1524 |
| SfaNI | GCATC | 5 cut(s) | 646, 755, 1263, 1307, 2688 |
| SfcI | CTRYAG | 1 cut(s) | 2067 |
| Sfr274I | CTCGAG | 2 cut(s) | 1825, 1976 |
| SfuI | TTCGAA | 1 cut(s) | 1780 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1435 |
| SinI | GGWCC | 3 cut(s) | 1255, 1607, 2055 |
| SlaI | CTCGAG | 2 cut(s) | 1825, 1976 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 48, 962, 2385 |
| SmlI | CTYRAG | 7 cut(s) | 233, 271, 294, 1825, 1976, 2281, 2693 |
| SmoI | CTYRAG | 7 cut(s) | 233, 271, 294, 1825, 1976, 2281, 2693 |
| SpeI | ACTAGT | 1 cut(s) | 2650 |
| SphI | GCATGC | 1 cut(s) | 2384 |
| SsiI | CCGC | 5 cut(s) | 392, 523, 801, 1610, 2058 |
| SspMI | CTAG | 3 cut(s) | 2528, 2555, 2651 |
| SstI | GAGCTC | 1 cut(s) | 1806 |
| StyD4I | CCNGG | 2 cut(s) | 1524, 1595 |
| TaaI | ACNGT | 2 cut(s) | 349, 494 |
| TaiI | ACGT | 5 cut(s) | 1080, 1359, 1874, 2028, 2151 |
| TaqI | TCGA | 9 cut(s) | 7, 1087, 1780, 1826, 1835, 1868, 1957, 1977, 2169 |
| TaqII | GACCGA | 1 cut(s) | 1500 |
| TatI | WGTACW | 2 cut(s) | 1160, 2647 |
| TfiI | GAWTC | 9 cut(s) | 262, 387, 1334, 1474, 1738, 2092, 2214, 2534, 2744 |
| TscAI | CASTG | 5 cut(s) | 201, 794, 826, 1300, 1389 |
| TseFI | GTSAC | 6 cut(s) | 188, 459, 488, 890, 1046, 1380 |
| TseI | GCWGC | 5 cut(s) | 106, 651, 947, 1619, 2188 |
| Tsp45I | GTSAC | 6 cut(s) | 188, 459, 488, 890, 1046, 1380 |
| TspRI | CASTG | 5 cut(s) | 201, 794, 826, 1300, 1389 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1119, 1900, 2488 |
| Vha464I | CTTAAG | 1 cut(s) | 2281 |
| VpaK11BI | GGWCC | 3 cut(s) | 1255, 1607, 2055 |
| XbaI | TCTAGA | 1 cut(s) | 2554 |
| XceI | RCATGY | 5 cut(s) | 148, 944, 1381, 1422, 2384 |
| XhoI | CTCGAG | 2 cut(s) | 1825, 1976 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1229, 1776, 2790 |
| XspI | CTAG | 3 cut(s) | 2528, 2555, 2651 |
| ZrmI | AGTACT | 1 cut(s) | 2649 |
| Zsp2I | ATGCAT | 2 cut(s) | 1910, 2703 |