Rroxscaffold_4G00305760

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
26402715 .. 26406303
3589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00305760.1

Sequence Viewer

Length: 657 bp
ATGTCCACTTTCGTTATGCACGGTACAGAAGCAGTTGAATGCATAATCCTGGACTTGAAGAAGTCAAATGAGGCACATGTGAACACTGAAGGTTTTGTTAGCATGAAGAAACTAAGACTGCTCATGATTTATCCCGACAAGTGCAAAGATGCCTTCACACAAGTTATTGGGGACTACAAGTATATTTTTCCCCAGTTGAGGTGTCTTACCTGGAATGGATGTCCTTCTAAATCCTTGCCATCTAATTTTGAACTAAAGAATCTTGTTCGCCTTAACGTGGTTGATAGTCACATTGAACAACTTTGGGAAGGACCACAGATAATGGAGTCTCCCGCCACTGATTTGACAACAGAAGAAGATTGTAGTTGGATCAAAAGTTGTGGGGTTCGTCTCTTTCACGTTGATCATGAGGAAGTGCAAACTGTAAGCACTACCCCGCCAAAAATTCATGAGGAAACCTCCGCAGACAATTTCTTATCGCGTGAGACAAAAAGGAGCAGGACAGAGACAGAGAAATCAGATACACAGGAAGAGATGGAAGAAGTCAAAGAGACAGGAGTTGCGGTGCAGGGAGCCATATGCTGTTGCTTCCCATCAGCTGAGTGTACTCTGAGAAGGAGAGAAAGAGAAATGGATGAAGAGATCTCGTTGGAGTGA

Protein Analysis

218

Amino Acids

24.96

Weight (kDa)

4.94

Isoelectric Point (pI)

62.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 481
AciI CCGC 4 cut(s) 333, 437, 462, 563
AclWI GGATC 1 cut(s) 377
AcsI RAATTY 1 cut(s) 444
AcuI CTGAAG 1 cut(s) 108
AfaI GTAC 2 cut(s) 25, 607
AfiI CCNNNNNNNGG 2 cut(s) 198, 277
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 4 cut(s) 38, 58, 251, 296
AjnI CCWGG 2 cut(s) 48, 209
AluBI AGCT 1 cut(s) 599
AluI AGCT 1 cut(s) 599
Alw26I GTCTC 5 cut(s) 333, 395, 479, 500, 545
AlwI GGATC 1 cut(s) 377
ApoI RAATTY 1 cut(s) 444
AspS9I GGNCC 1 cut(s) 311
AvaII GGWCC 1 cut(s) 311
BccI CCATC 3 cut(s) 247, 529, 601
BciT130I CCWGG 2 cut(s) 50, 211
BclI TGATCA 1 cut(s) 403
BcoDI GTCTC 5 cut(s) 333, 395, 479, 500, 545
BglII AGATCT 1 cut(s) 642
Bme1390I CCNGG 2 cut(s) 50, 211
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 1 cut(s) 574
BmrFI CCNGG 2 cut(s) 50, 211
BmrI ACTGGG 1 cut(s) 187
BmsI GCATC 1 cut(s) 139
BmuI ACTGGG 1 cut(s) 187
BplI GAGNNNNNCTC 2 cut(s) 443, 475
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 277
Bse1I ACTGG 1 cut(s) 193
BseBI CCWGG 2 cut(s) 50, 211
BseGI GGATG 2 cut(s) 224, 640
BseLI CCNNNNNNNGG 2 cut(s) 198, 277
BseMII CTCAG 2 cut(s) 591, 602
BseNI ACTGG 1 cut(s) 193
BsgI GTGCAG 1 cut(s) 587
Bsh1236I CGCG 1 cut(s) 481
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 2 cut(s) 198, 277
BsmAI GTCTC 5 cut(s) 333, 395, 479, 500, 545
BsmBI CGTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 185
BsmI GAATGC 1 cut(s) 44
Bsp143I GATC 3 cut(s) 369, 403, 642
BspACI CCGC 4 cut(s) 333, 437, 462, 563
BspCNI CTCAG 2 cut(s) 592, 603
BspFNI CGCG 1 cut(s) 481
BspHI TCATGA 3 cut(s) 123, 406, 448
BspLI GGNNCC 1 cut(s) 574
BspPI GGATC 1 cut(s) 377
BsrI ACTGG 1 cut(s) 193
BssMI GATC 3 cut(s) 369, 403, 642
Bst2UI CCWGG 2 cut(s) 50, 211
Bst4CI ACNGT 2 cut(s) 23, 424
Bst6I CTCTTC 2 cut(s) 525, 633
BstDEI CTNAG 3 cut(s) 113, 600, 611
BstF5I GGATG 2 cut(s) 224, 640
BstFNI CGCG 1 cut(s) 481
BstKTI GATC 3 cut(s) 372, 406, 645
BstMAI GTCTC 5 cut(s) 333, 395, 479, 500, 545
BstMBI GATC 3 cut(s) 369, 403, 642
BstNI CCWGG 2 cut(s) 50, 211
BstNSI RCATGY 1 cut(s) 80
BstSCI CCNGG 2 cut(s) 48, 209
BstUI CGCG 1 cut(s) 481
BstX2I RGATCY 1 cut(s) 642
BstYI RGATCY 1 cut(s) 642
BtsCI GGATG 2 cut(s) 224, 640
BtsIMutI CAGTG 2 cut(s) 84, 336
CciI TCATGA 3 cut(s) 123, 406, 448
Cfr13I GGNCC 1 cut(s) 311
Csp6I GTAC 2 cut(s) 24, 606
CspCI CAANNNNNGTGG 2 cut(s) 361, 396
CviAII CATG 5 cut(s) 77, 103, 124, 407, 449
CviJI RGCY 2 cut(s) 575, 599
CviKI_1 RGCY 2 cut(s) 575, 599
CviQI GTAC 2 cut(s) 24, 606
DdeI CTNAG 3 cut(s) 113, 600, 611
DpnI GATC 3 cut(s) 371, 405, 644
DpnII GATC 3 cut(s) 369, 403, 642
Eam1104I CTCTTC 2 cut(s) 525, 633
EarI CTCTTC 2 cut(s) 525, 633
Eco47I GGWCC 1 cut(s) 311
Eco57I CTGAAG 1 cut(s) 108
EcoRII CCWGG 2 cut(s) 48, 209
EcoT22I ATGCAT 1 cut(s) 44
Esp3I CGTCTC 1 cut(s) 395
FaeI CATG 5 cut(s) 80, 106, 127, 410, 452
FaqI GGGAC 1 cut(s) 185
FatI CATG 5 cut(s) 76, 102, 123, 406, 448
FauI CCCGC 2 cut(s) 340, 444
FauNDI CATATG 1 cut(s) 578
FbaI TGATCA 1 cut(s) 403
FokI GGATG 2 cut(s) 231, 647
Hin1II CATG 5 cut(s) 80, 106, 127, 410, 452
HinfI GANTC 2 cut(s) 259, 326
Hpy166II GTNNAC 3 cut(s) 6, 82, 606
Hpy188I TCNGA 2 cut(s) 520, 612
Hpy188III TCNNGA 4 cut(s) 124, 134, 407, 449
Hpy8I GTNNAC 3 cut(s) 6, 82, 606
HpyAV CCTTC 5 cut(s) 83, 163, 234, 302, 609
HpyCH4III ACNGT 2 cut(s) 23, 424
HpyCH4IV ACGT 2 cut(s) 276, 399
HpyCH4V TGCA 5 cut(s) 19, 42, 144, 418, 568
HpyF3I CTNAG 3 cut(s) 113, 600, 611
HpySE526I ACGT 2 cut(s) 276, 399
Hsp92II CATG 5 cut(s) 80, 106, 127, 410, 452
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 3 cut(s) 369, 403, 642
LmnI GCTCC 2 cut(s) 495, 572
LpnPI CCDG 9 cut(s) 35, 62, 196, 206, 223, 484, 512, 540, 554
LweI GCATC 1 cut(s) 139
MaeII ACGT 2 cut(s) 276, 399
MaeIII GTNAC 1 cut(s) 287
MalI GATC 3 cut(s) 371, 405, 644
MboI GATC 3 cut(s) 369, 403, 642
MboII GAAGA 7 cut(s) 70, 118, 365, 368, 542, 551, 650
MflI RGATCY 1 cut(s) 642
MluCI AATT 3 cut(s) 244, 444, 469
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 2 cut(s) 347, 630
MnlI CCTC 5 cut(s) 64, 192, 403, 445, 469
Mph1103I ATGCAT 1 cut(s) 44
MseI TTAA 1 cut(s) 273
MspA1I CMGCKG 1 cut(s) 599
MspR9I CCNGG 2 cut(s) 50, 211
Mva1269I GAATGC 1 cut(s) 44
MvaI CCWGG 2 cut(s) 50, 211
MvnI CGCG 1 cut(s) 481
NdeI CATATG 1 cut(s) 578
NdeII GATC 3 cut(s) 369, 403, 642
NlaIII CATG 5 cut(s) 80, 106, 127, 410, 452
NlaIV GGNNCC 1 cut(s) 574
NmuCI GTSAC 1 cut(s) 287
NsiI ATGCAT 1 cut(s) 44
NspI RCATGY 1 cut(s) 80
PagI TCATGA 3 cut(s) 123, 406, 448
PciI ACATGT 1 cut(s) 76
PctI GAATGC 1 cut(s) 44
PfeI GAWTC 1 cut(s) 259
PfoI TCCNGGA 1 cut(s) 48
PleI GAGTC 1 cut(s) 334
PpsI GAGTC 1 cut(s) 334
PscI ACATGT 1 cut(s) 76
Psp6I CCWGG 2 cut(s) 48, 209
PspGI CCWGG 2 cut(s) 48, 209
PspN4I GGNNCC 1 cut(s) 574
PspPI GGNCC 1 cut(s) 311
PsuI RGATCY 1 cut(s) 642
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 2 cut(s) 25, 607
RsaNI GTAC 2 cut(s) 24, 606
SaqAI TTAA 1 cut(s) 273
Sau3AI GATC 3 cut(s) 369, 403, 642
Sau96I GGNCC 1 cut(s) 311
SchI GAGTC 1 cut(s) 335
ScrFI CCNGG 2 cut(s) 50, 211
SetI ASST 7 cut(s) 94, 203, 212, 279, 402, 461, 601
SfaNI GCATC 1 cut(s) 139
SinI GGWCC 1 cut(s) 311
Sse9I AATT 3 cut(s) 244, 444, 469
SsiI CCGC 4 cut(s) 333, 437, 462, 563
StyD4I CCNGG 2 cut(s) 48, 209
TaaI ACNGT 2 cut(s) 23, 424
TaiI ACGT 2 cut(s) 279, 402
TasI AATT 3 cut(s) 244, 444, 469
TatI WGTACW 1 cut(s) 605
TfiI GAWTC 1 cut(s) 259
Tru1I TTAA 1 cut(s) 273
Tru9I TTAA 1 cut(s) 273
TscAI CASTG 2 cut(s) 91, 343
TseFI GTSAC 1 cut(s) 287
Tsp45I GTSAC 1 cut(s) 287
TspDTI ATGAA 3 cut(s) 119, 437, 651
TspRI CASTG 2 cut(s) 91, 343
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 444
XceI RCATGY 1 cut(s) 80
Zsp2I ATGCAT 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.