TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 92 - 236 | 1e-20 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 185, 681 |
| AclWI | GGATC | 3 cut(s) | 315, 328, 537 |
| AcsI | RAATTY | 1 cut(s) | 288 |
| AfaI | GTAC | 3 cut(s) | 89, 146, 192 |
| AflIII | ACRYGT | 2 cut(s) | 267, 534 |
| AgsI | TTSAA | 2 cut(s) | 563, 578 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AluBI | AGCT | 7 cut(s) | 10, 70, 113, 296, 340, 678, 714 |
| AluI | AGCT | 7 cut(s) | 10, 70, 113, 296, 340, 678, 714 |
| Alw21I | GWGCWC | 1 cut(s) | 477 |
| Alw26I | GTCTC | 1 cut(s) | 579 |
| AlwI | GGATC | 3 cut(s) | 315, 328, 537 |
| ApeKI | GCWGC | 2 cut(s) | 337, 678 |
| ApoI | RAATTY | 1 cut(s) | 288 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 503, 535 |
| AsuC2I | CCSGG | 2 cut(s) | 498, 590 |
| AsuHPI | GGTGA | 2 cut(s) | 254, 560 |
| BamHI | GGATCC | 1 cut(s) | 320 |
| BbsI | GAAGAC | 1 cut(s) | 266 |
| Bbv12I | GWGCWC | 1 cut(s) | 477 |
| BbvI | GCAGC | 2 cut(s) | 349, 665 |
| BccI | CCATC | 3 cut(s) | 315, 430, 501 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BcnI | CCSGG | 2 cut(s) | 498, 590 |
| BcoDI | GTCTC | 1 cut(s) | 579 |
| BisI | GCNGC | 3 cut(s) | 338, 679, 682 |
| BlsI | GCNGC | 3 cut(s) | 339, 680, 683 |
| Bme1390I | CCNGG | 3 cut(s) | 279, 498, 590 |
| BmiI | GGNNCC | 1 cut(s) | 322 |
| BmrFI | CCNGG | 3 cut(s) | 279, 498, 590 |
| BmsI | GCATC | 1 cut(s) | 85 |
| BpiI | GAAGAC | 1 cut(s) | 266 |
| BpuMI | CCSGG | 2 cut(s) | 498, 590 |
| BsaI | GGTCTC | 1 cut(s) | 579 |
| BsaJI | CCNNGG | 1 cut(s) | 554 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 576, 606 |
| Bse3DI | GCAATG | 1 cut(s) | 387 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseDI | CCNNGG | 1 cut(s) | 554 |
| BseGI | GGATG | 1 cut(s) | 493 |
| BseMI | GCAATG | 1 cut(s) | 387 |
| BseMII | CTCAG | 1 cut(s) | 603 |
| BseXI | GCAGC | 2 cut(s) | 349, 665 |
| BsgI | GTGCAG | 1 cut(s) | 356 |
| BsiHKAI | GWGCWC | 1 cut(s) | 477 |
| BsiSI | CCGG | 2 cut(s) | 497, 590 |
| BsmAI | GTCTC | 1 cut(s) | 579 |
| Bso31I | GGTCTC | 1 cut(s) | 579 |
| Bsp1286I | GDGCHC | 1 cut(s) | 477 |
| Bsp143I | GATC | 4 cut(s) | 244, 320, 427, 529 |
| Bsp19I | CCATGG | 1 cut(s) | 554 |
| BspACI | CCGC | 2 cut(s) | 185, 681 |
| BspCNI | CTCAG | 1 cut(s) | 604 |
| BspHI | TCATGA | 1 cut(s) | 100 |
| BspLI | GGNNCC | 1 cut(s) | 322 |
| BspPI | GGATC | 3 cut(s) | 315, 328, 537 |
| BspTNI | GGTCTC | 1 cut(s) | 579 |
| BsrDI | GCAATG | 1 cut(s) | 387 |
| BssECI | CCNNGG | 1 cut(s) | 554 |
| BssMI | GATC | 4 cut(s) | 244, 320, 427, 529 |
| BssT1I | CCWWGG | 1 cut(s) | 554 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 2 cut(s) | 334, 479 |
| Bst6I | CTCTTC | 1 cut(s) | 277 |
| BstC8I | GCNNGC | 1 cut(s) | 43 |
| BstDEI | CTNAG | 1 cut(s) | 612 |
| BstDSI | CCRYGG | 1 cut(s) | 554 |
| BstF5I | GGATG | 1 cut(s) | 493 |
| BstKTI | GATC | 4 cut(s) | 247, 323, 430, 532 |
| BstMAI | GTCTC | 1 cut(s) | 579 |
| BstMBI | GATC | 4 cut(s) | 244, 320, 427, 529 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstNSI | RCATGY | 2 cut(s) | 271, 538 |
| BstSCI | CCNGG | 3 cut(s) | 277, 496, 588 |
| BstV1I | GCAGC | 2 cut(s) | 349, 665 |
| BstV2I | GAAGAC | 1 cut(s) | 266 |
| BstX2I | RGATCY | 1 cut(s) | 320 |
| BstYI | RGATCY | 1 cut(s) | 320 |
| BtgI | CCRYGG | 1 cut(s) | 554 |
| BtsCI | GGATG | 1 cut(s) | 493 |
| BtsI | GCAGTG | 1 cut(s) | 648 |
| BtsIMutI | CAGTG | 4 cut(s) | 129, 317, 609, 648 |
| Cac8I | GCNNGC | 1 cut(s) | 43 |
| CciI | TCATGA | 1 cut(s) | 100 |
| CseI | GACGC | 1 cut(s) | 416 |
| Csp6I | GTAC | 3 cut(s) | 88, 145, 191 |
| CviAII | CATG | 6 cut(s) | 101, 268, 359, 467, 535, 555 |
| CviQI | GTAC | 3 cut(s) | 88, 145, 191 |
| DdeI | CTNAG | 1 cut(s) | 612 |
| DpnI | GATC | 4 cut(s) | 246, 322, 429, 531 |
| DpnII | GATC | 4 cut(s) | 244, 320, 427, 529 |
| Eam1104I | CTCTTC | 1 cut(s) | 277 |
| EarI | CTCTTC | 1 cut(s) | 277 |
| Eco130I | CCWWGG | 1 cut(s) | 554 |
| Eco31I | GGTCTC | 1 cut(s) | 579 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 1 cut(s) | 554 |
| ErhI | CCWWGG | 1 cut(s) | 554 |
| FaeI | CATG | 6 cut(s) | 104, 271, 362, 470, 538, 558 |
| FatI | CATG | 6 cut(s) | 100, 267, 358, 466, 534, 554 |
| FauI | CCCGC | 1 cut(s) | 192 |
| Fnu4HI | GCNGC | 3 cut(s) | 338, 679, 682 |
| FokI | GGATG | 1 cut(s) | 480 |
| Fsp4HI | GCNGC | 3 cut(s) | 338, 679, 682 |
| GluI | GCNGC | 3 cut(s) | 338, 679, 682 |
| HapII | CCGG | 2 cut(s) | 497, 590 |
| HgaI | GACGC | 1 cut(s) | 416 |
| Hin1II | CATG | 6 cut(s) | 104, 271, 362, 470, 538, 558 |
| HincII | GTYRAC | 1 cut(s) | 129 |
| HindII | GTYRAC | 1 cut(s) | 129 |
| HinfI | GANTC | 4 cut(s) | 4, 119, 154, 644 |
| HpaII | CCGG | 2 cut(s) | 497, 590 |
| HphI | GGTGA | 2 cut(s) | 254, 560 |
| Hpy166II | GTNNAC | 2 cut(s) | 129, 165 |
| Hpy188I | TCNGA | 2 cut(s) | 427, 506 |
| Hpy188III | TCNNGA | 2 cut(s) | 29, 101 |
| Hpy8I | GTNNAC | 2 cut(s) | 129, 165 |
| HpyAV | CCTTC | 2 cut(s) | 575, 593 |
| HpyCH4III | ACNGT | 2 cut(s) | 334, 479 |
| HpyCH4V | TGCA | 7 cut(s) | 45, 108, 250, 337, 387, 450, 653 |
| HpyF3I | CTNAG | 1 cut(s) | 612 |
| Hsp92II | CATG | 6 cut(s) | 104, 271, 362, 470, 538, 558 |
| Kzo9I | GATC | 4 cut(s) | 244, 320, 427, 529 |
| LmnI | GCTCC | 2 cut(s) | 472, 495 |
| LpnPI | CCDG | 8 cut(s) | 173, 224, 264, 291, 306, 356, 510, 603 |
| Lsp1109I | GCAGC | 2 cut(s) | 349, 665 |
| LweI | GCATC | 1 cut(s) | 85 |
| MaeIII | GTNAC | 2 cut(s) | 395, 616 |
| MalI | GATC | 4 cut(s) | 246, 322, 429, 531 |
| MboI | GATC | 4 cut(s) | 244, 320, 427, 529 |
| MboII | GAAGA | 3 cut(s) | 266, 294, 590 |
| MfeI | CAATTG | 1 cut(s) | 349 |
| MflI | RGATCY | 1 cut(s) | 320 |
| MhlI | GDGCHC | 1 cut(s) | 477 |
| MluCI | AATT | 8 cut(s) | 32, 60, 288, 327, 349, 415, 573, 659 |
| MlyI | GAGTC | 1 cut(s) | 128 |
| MmeI | TCCRAC | 1 cut(s) | 507 |
| MnlI | CCTC | 6 cut(s) | 31, 42, 264, 334, 397, 607 |
| MslI | CAYNNNNRTG | 1 cut(s) | 240 |
| MspA1I | CMGCKG | 1 cut(s) | 187 |
| MspI | CCGG | 2 cut(s) | 497, 590 |
| MspR9I | CCNGG | 3 cut(s) | 279, 498, 590 |
| MunI | CAATTG | 1 cut(s) | 349 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| NciI | CCSGG | 2 cut(s) | 498, 590 |
| NcoI | CCATGG | 1 cut(s) | 554 |
| NdeII | GATC | 4 cut(s) | 244, 320, 427, 529 |
| NlaIII | CATG | 6 cut(s) | 104, 271, 362, 470, 538, 558 |
| NlaIV | GGNNCC | 1 cut(s) | 322 |
| NmuCI | GTSAC | 1 cut(s) | 616 |
| NspI | RCATGY | 2 cut(s) | 271, 538 |
| PagI | TCATGA | 1 cut(s) | 100 |
| PciI | ACATGT | 2 cut(s) | 267, 534 |
| PfeI | GAWTC | 3 cut(s) | 4, 154, 644 |
| PflFI | GACNNNGTC | 1 cut(s) | 590 |
| PfoI | TCCNGGA | 1 cut(s) | 277 |
| PkrI | GCNGC | 3 cut(s) | 339, 680, 683 |
| PleI | GAGTC | 1 cut(s) | 127 |
| PpsI | GAGTC | 1 cut(s) | 127 |
| PscI | ACATGT | 2 cut(s) | 267, 534 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PspN4I | GGNNCC | 1 cut(s) | 322 |
| PsuI | RGATCY | 1 cut(s) | 320 |
| PsyI | GACNNNGTC | 1 cut(s) | 590 |
| RsaI | GTAC | 3 cut(s) | 89, 146, 192 |
| RsaNI | GTAC | 3 cut(s) | 88, 145, 191 |
| RseI | CAYNNNNRTG | 1 cut(s) | 240 |
| SatI | GCNGC | 3 cut(s) | 338, 679, 682 |
| Sau3AI | GATC | 4 cut(s) | 244, 320, 427, 529 |
| SchI | GAGTC | 1 cut(s) | 128 |
| ScrFI | CCNGG | 3 cut(s) | 279, 498, 590 |
| SduI | GDGCHC | 1 cut(s) | 477 |
| SfaNI | GCATC | 1 cut(s) | 85 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 240 |
| Sse9I | AATT | 8 cut(s) | 32, 60, 288, 327, 349, 415, 573, 659 |
| SsiI | CCGC | 2 cut(s) | 185, 681 |
| StyD4I | CCNGG | 3 cut(s) | 277, 496, 588 |
| StyI | CCWWGG | 1 cut(s) | 554 |
| TaaI | ACNGT | 2 cut(s) | 334, 479 |
| TaqI | TCGA | 1 cut(s) | 30 |
| TasI | AATT | 8 cut(s) | 32, 60, 288, 327, 349, 415, 573, 659 |
| TatI | WGTACW | 1 cut(s) | 87 |
| TauI | GCSGC | 1 cut(s) | 684 |
| TfiI | GAWTC | 3 cut(s) | 4, 154, 644 |
| TscAI | CASTG | 4 cut(s) | 129, 317, 616, 655 |
| TseFI | GTSAC | 1 cut(s) | 616 |
| TseI | GCWGC | 2 cut(s) | 337, 678 |
| Tsp45I | GTSAC | 1 cut(s) | 616 |
| TspDTI | ATGAA | 3 cut(s) | 17, 63, 612 |
| TspRI | CASTG | 4 cut(s) | 129, 317, 616, 655 |
| Tth111I | GACNNNGTC | 1 cut(s) | 590 |
| XapI | RAATTY | 1 cut(s) | 288 |
| XceI | RCATGY | 2 cut(s) | 271, 538 |