WRKY Transcription Factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 3 - 148 | 5.1e-20 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 541 |
| AciI | CCGC | 5 cut(s) | 51, 432, 499, 535, 538 |
| AclWI | GGATC | 1 cut(s) | 475 |
| AcsI | RAATTY | 2 cut(s) | 21, 378 |
| AfaI | GTAC | 1 cut(s) | 178 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 396 |
| AflIII | ACRYGT | 1 cut(s) | 267 |
| AgsI | TTSAA | 4 cut(s) | 37, 60, 238, 311 |
| AjnI | CCWGG | 4 cut(s) | 10, 252, 273, 303 |
| AlwI | GGATC | 1 cut(s) | 475 |
| AoxI | GGCC | 2 cut(s) | 348, 452 |
| ApaI | GGGCCC | 1 cut(s) | 456 |
| ApoI | RAATTY | 2 cut(s) | 21, 378 |
| AspS9I | GGNCC | 2 cut(s) | 452, 453 |
| AsuC2I | CCSGG | 1 cut(s) | 451 |
| AsuHPI | GGTGA | 1 cut(s) | 254 |
| BaeGI | GKGCMC | 1 cut(s) | 456 |
| BanII | GRGCYC | 1 cut(s) | 456 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 160, 192 |
| BccI | CCATC | 2 cut(s) | 48, 162 |
| BciT130I | CCWGG | 4 cut(s) | 12, 254, 275, 305 |
| BclI | TGATCA | 1 cut(s) | 463 |
| BcnI | CCSGG | 1 cut(s) | 451 |
| BfuAI | ACCTGC | 1 cut(s) | 541 |
| BisI | GCNGC | 1 cut(s) | 536 |
| BlsI | GCNGC | 1 cut(s) | 537 |
| Bme1390I | CCNGG | 5 cut(s) | 12, 254, 275, 305, 451 |
| BmgT120I | GGNCC | 2 cut(s) | 452, 453 |
| BmiI | GGNNCC | 1 cut(s) | 454 |
| BmrFI | CCNGG | 5 cut(s) | 12, 254, 275, 305, 451 |
| BpmI | CTGGAG | 1 cut(s) | 275 |
| BpuMI | CCSGG | 1 cut(s) | 451 |
| BsaJI | CCNNGG | 1 cut(s) | 274 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 396 |
| BseBI | CCWGG | 4 cut(s) | 12, 254, 275, 305 |
| BseDI | CCNNGG | 1 cut(s) | 274 |
| BseGI | GGATG | 1 cut(s) | 149 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 396 |
| BseMII | CTCAG | 1 cut(s) | 336 |
| BseSI | GKGCMC | 1 cut(s) | 456 |
| BshFI | GGCC | 2 cut(s) | 350, 454 |
| BsiSI | CCGG | 1 cut(s) | 450 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 396 |
| BsnI | GGCC | 2 cut(s) | 350, 454 |
| Bsp120I | GGGCCC | 1 cut(s) | 452 |
| Bsp1286I | GDGCHC | 1 cut(s) | 456 |
| Bsp143I | GATC | 3 cut(s) | 262, 463, 480 |
| BspACI | CCGC | 5 cut(s) | 51, 432, 499, 535, 538 |
| BspANI | GGCC | 2 cut(s) | 350, 454 |
| BspCNI | CTCAG | 1 cut(s) | 337 |
| BspHI | TCATGA | 1 cut(s) | 466 |
| BspLI | GGNNCC | 1 cut(s) | 454 |
| BspMI | ACCTGC | 1 cut(s) | 541 |
| BspPI | GGATC | 1 cut(s) | 475 |
| BssECI | CCNNGG | 1 cut(s) | 274 |
| BssMI | GATC | 3 cut(s) | 262, 463, 480 |
| Bst2UI | CCWGG | 4 cut(s) | 12, 254, 275, 305 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| Bst6I | CTCTTC | 1 cut(s) | 497 |
| BstDEI | CTNAG | 1 cut(s) | 345 |
| BstF5I | GGATG | 1 cut(s) | 149 |
| BstKTI | GATC | 3 cut(s) | 265, 466, 483 |
| BstMBI | GATC | 3 cut(s) | 262, 463, 480 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 119, 229 |
| BstNI | CCWGG | 4 cut(s) | 12, 254, 275, 305 |
| BstNSI | RCATGY | 1 cut(s) | 271 |
| BstSCI | CCNGG | 5 cut(s) | 10, 252, 273, 303, 449 |
| BstSLI | GKGCMC | 1 cut(s) | 456 |
| BstX2I | RGATCY | 1 cut(s) | 480 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 84 |
| BstYI | RGATCY | 1 cut(s) | 480 |
| BsuRI | GGCC | 2 cut(s) | 350, 454 |
| BtsCI | GGATG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 2 cut(s) | 50, 342 |
| BveI | ACCTGC | 1 cut(s) | 541 |
| CciI | TCATGA | 1 cut(s) | 466 |
| Cfr13I | GGNCC | 2 cut(s) | 452, 453 |
| Csp6I | GTAC | 1 cut(s) | 177 |
| CviAII | CATG | 6 cut(s) | 194, 268, 288, 383, 467, 496 |
| CviJI | RGCY | 4 cut(s) | 322, 350, 454, 491 |
| CviKI_1 | RGCY | 4 cut(s) | 322, 350, 454, 491 |
| CviQI | GTAC | 1 cut(s) | 177 |
| DdeI | CTNAG | 1 cut(s) | 345 |
| DpnI | GATC | 3 cut(s) | 264, 465, 482 |
| DpnII | GATC | 3 cut(s) | 262, 463, 480 |
| Eam1104I | CTCTTC | 1 cut(s) | 497 |
| EarI | CTCTTC | 1 cut(s) | 497 |
| Eco24I | GRGCYC | 1 cut(s) | 456 |
| EcoRI | GAATTC | 1 cut(s) | 378 |
| EcoRII | CCWGG | 4 cut(s) | 10, 252, 273, 303 |
| EcoT38I | GRGCYC | 1 cut(s) | 456 |
| FaeI | CATG | 6 cut(s) | 197, 271, 291, 386, 470, 499 |
| FatI | CATG | 6 cut(s) | 193, 267, 287, 382, 466, 495 |
| FbaI | TGATCA | 1 cut(s) | 463 |
| Fnu4HI | GCNGC | 1 cut(s) | 536 |
| FokI | GGATG | 1 cut(s) | 136 |
| FriOI | GRGCYC | 1 cut(s) | 456 |
| Fsp4HI | GCNGC | 1 cut(s) | 536 |
| GluI | GCNGC | 1 cut(s) | 536 |
| GsuI | CTGGAG | 1 cut(s) | 275 |
| HaeIII | GGCC | 2 cut(s) | 350, 454 |
| HapII | CCGG | 1 cut(s) | 450 |
| Hin1II | CATG | 6 cut(s) | 197, 271, 291, 386, 470, 499 |
| HinfI | GANTC | 4 cut(s) | 108, 249, 257, 284 |
| HpaII | CCGG | 1 cut(s) | 450 |
| HphI | GGTGA | 1 cut(s) | 254 |
| Hpy188I | TCNGA | 1 cut(s) | 262 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 397, 467 |
| HpyAV | CCTTC | 1 cut(s) | 9 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 2 cut(s) | 70, 386 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 119, 229 |
| HpyF3I | CTNAG | 1 cut(s) | 345 |
| Hsp92II | CATG | 6 cut(s) | 197, 271, 291, 386, 470, 499 |
| Ksp22I | TGATCA | 1 cut(s) | 463 |
| Kzo9I | GATC | 3 cut(s) | 262, 463, 480 |
| LmnI | GCTCC | 1 cut(s) | 228 |
| MaeIII | GTNAC | 1 cut(s) | 242 |
| MalI | GATC | 3 cut(s) | 264, 465, 482 |
| MboI | GATC | 3 cut(s) | 262, 463, 480 |
| MboII | GAAGA | 1 cut(s) | 514 |
| MflI | RGATCY | 1 cut(s) | 480 |
| MhlI | GDGCHC | 1 cut(s) | 456 |
| MluCI | AATT | 3 cut(s) | 21, 82, 378 |
| MlyI | GAGTC | 2 cut(s) | 266, 293 |
| MnlI | CCTC | 1 cut(s) | 340 |
| MseI | TTAA | 3 cut(s) | 129, 182, 559 |
| MspI | CCGG | 1 cut(s) | 450 |
| MspR9I | CCNGG | 5 cut(s) | 12, 254, 275, 305, 451 |
| MvaI | CCWGG | 4 cut(s) | 12, 254, 275, 305 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 119, 229 |
| NciI | CCSGG | 1 cut(s) | 451 |
| NdeII | GATC | 3 cut(s) | 262, 463, 480 |
| NlaIII | CATG | 6 cut(s) | 197, 271, 291, 386, 470, 499 |
| NlaIV | GGNNCC | 1 cut(s) | 454 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| NspI | RCATGY | 1 cut(s) | 271 |
| PagI | TCATGA | 1 cut(s) | 466 |
| PciI | ACATGT | 1 cut(s) | 267 |
| PfeI | GAWTC | 2 cut(s) | 108, 249 |
| PfoI | TCCNGGA | 2 cut(s) | 10, 252 |
| PkrI | GCNGC | 1 cut(s) | 537 |
| PleI | GAGTC | 2 cut(s) | 265, 292 |
| PpsI | GAGTC | 2 cut(s) | 265, 292 |
| PscI | ACATGT | 1 cut(s) | 267 |
| Psp6I | CCWGG | 4 cut(s) | 10, 252, 273, 303 |
| PspGI | CCWGG | 4 cut(s) | 10, 252, 273, 303 |
| PspN4I | GGNNCC | 1 cut(s) | 454 |
| PspOMI | GGGCCC | 1 cut(s) | 452 |
| PspPI | GGNCC | 2 cut(s) | 452, 453 |
| PsuI | RGATCY | 1 cut(s) | 480 |
| RsaI | GTAC | 1 cut(s) | 178 |
| RsaNI | GTAC | 1 cut(s) | 177 |
| SaqAI | TTAA | 3 cut(s) | 129, 182, 559 |
| SatI | GCNGC | 1 cut(s) | 536 |
| Sau3AI | GATC | 3 cut(s) | 262, 463, 480 |
| Sau96I | GGNCC | 2 cut(s) | 452, 453 |
| SchI | GAGTC | 2 cut(s) | 266, 293 |
| ScrFI | CCNGG | 5 cut(s) | 12, 254, 275, 305, 451 |
| SduI | GDGCHC | 1 cut(s) | 456 |
| SetI | ASST | 2 cut(s) | 244, 555 |
| Sse9I | AATT | 3 cut(s) | 21, 82, 378 |
| SsiI | CCGC | 5 cut(s) | 51, 432, 499, 535, 538 |
| StyD4I | CCNGG | 5 cut(s) | 10, 252, 273, 303, 449 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaqI | TCGA | 1 cut(s) | 166 |
| TasI | AATT | 3 cut(s) | 21, 82, 378 |
| TatI | WGTACW | 1 cut(s) | 176 |
| TauI | GCSGC | 1 cut(s) | 538 |
| TfiI | GAWTC | 2 cut(s) | 108, 249 |
| Tru1I | TTAA | 3 cut(s) | 129, 182, 559 |
| Tru9I | TTAA | 3 cut(s) | 129, 182, 559 |
| TscAI | CASTG | 2 cut(s) | 50, 349 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 3 cut(s) | 345, 371, 545 |
| TspGWI | ACGGA | 1 cut(s) | 215 |
| TspRI | CASTG | 2 cut(s) | 50, 349 |
| XapI | RAATTY | 2 cut(s) | 21, 378 |
| XceI | RCATGY | 1 cut(s) | 271 |