TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3274 |
| Acc16I | TGCGCA | 1 cut(s) | 3540 |
| Acc36I | ACCTGC | 2 cut(s) | 3699, 3798 |
| AccB1I | GGYRCC | 1 cut(s) | 304 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1529 |
| AccBSI | CCGCTC | 2 cut(s) | 431, 1844 |
| AccI | GTMKAC | 2 cut(s) | 399, 1164 |
| AccII | CGCG | 1 cut(s) | 469 |
| AccIII | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| AclWI | GGATC | 7 cut(s) | 320, 1875, 1924, 1937, 2787, 3066, 4006 |
| AcoI | YGGCCR | 2 cut(s) | 88, 4050 |
| AcsI | RAATTY | 4 cut(s) | 966, 2000, 4079, 4266 |
| AcuI | CTGAAG | 7 cut(s) | 162, 596, 1874, 2540, 2822, 3101, 3686 |
| AdeI | CACNNNGTG | 1 cut(s) | 246 |
| AfaI | GTAC | 5 cut(s) | 3587, 3592, 3633, 3689, 3895 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1109, 1529, 3628 |
| AflII | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| AflIII | ACRYGT | 2 cut(s) | 1659, 3972 |
| AjiI | CACGTC | 1 cut(s) | 183 |
| AjnI | CCWGG | 5 cut(s) | 270, 1228, 3721, 3846, 3978 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1104, 1136, 3717, 3749 |
| Alw21I | GWGCWC | 4 cut(s) | 106, 261, 1138, 4403 |
| AlwI | GGATC | 7 cut(s) | 320, 1875, 1924, 1937, 2787, 3066, 4006 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2751 |
| Ama87I | CYCGRG | 2 cut(s) | 3188, 4402 |
| Aor13HI | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| AoxI | GGCC | 4 cut(s) | 88, 645, 3284, 4050 |
| ApoI | RAATTY | 4 cut(s) | 966, 2000, 4079, 4266 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2715, 2747 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 574, 2175, 2385, 2595, 3018 |
| AspLEI | GCGC | 4 cut(s) | 471, 1239, 3046, 3541 |
| AspS9I | GGNCC | 5 cut(s) | 426, 645, 2649, 3284, 3802 |
| AsuC2I | CCSGG | 2 cut(s) | 2883, 2973 |
| AsuHPI | GGTGA | 4 cut(s) | 686, 1643, 3739, 3926 |
| AvaI | CYCGRG | 2 cut(s) | 3188, 4402 |
| AvaII | GGWCC | 3 cut(s) | 426, 2649, 3802 |
| BalI | TGGCCA | 1 cut(s) | 4052 |
| BamHI | GGATCC | 1 cut(s) | 1929 |
| BanI | GGYRCC | 1 cut(s) | 304 |
| BanII | GRGCYC | 3 cut(s) | 106, 150, 261 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 29, 61 |
| BbsI | GAAGAC | 3 cut(s) | 37, 72, 3107 |
| Bbv12I | GWGCWC | 4 cut(s) | 106, 261, 1138, 4403 |
| BceAI | ACGGC | 4 cut(s) | 502, 1305, 1491, 4114 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 64, 98, 4473, 4507 |
| BciT130I | CCWGG | 5 cut(s) | 272, 1230, 3723, 3848, 3980 |
| BciVI | GTATCC | 1 cut(s) | 277 |
| BclI | TGATCA | 2 cut(s) | 1006, 4135 |
| BcnI | CCSGG | 2 cut(s) | 2883, 2973 |
| BfmI | CTRYAG | 3 cut(s) | 1293, 2345, 3307 |
| BfoI | RGCGCY | 1 cut(s) | 3047 |
| BfrI | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| BfuAI | ACCTGC | 2 cut(s) | 3699, 3798 |
| BfuI | GTATCC | 1 cut(s) | 277 |
| BglII | AGATCT | 1 cut(s) | 78 |
| Bme1390I | CCNGG | 7 cut(s) | 272, 1230, 2883, 2973, 3723, 3848, 3980 |
| Bme18I | GGWCC | 3 cut(s) | 426, 2649, 3802 |
| BmeT110I | CYCGRG | 2 cut(s) | 3188, 4402 |
| BmgBI | CACGTC | 1 cut(s) | 183 |
| BmgT120I | GGNCC | 5 cut(s) | 426, 645, 2649, 3284, 3802 |
| BmiI | GGNNCC | 4 cut(s) | 306, 1931, 2650, 4420 |
| BmrFI | CCNGG | 7 cut(s) | 272, 1230, 2883, 2973, 3723, 3848, 3980 |
| BmrI | ACTGGG | 4 cut(s) | 1517, 2070, 2280, 2490 |
| BmsI | GCATC | 7 cut(s) | 1288, 1592, 3475, 3526, 4110, 4396, 4501 |
| BmuI | ACTGGG | 4 cut(s) | 1517, 2070, 2280, 2490 |
| BpiI | GAAGAC | 3 cut(s) | 37, 72, 3107 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 415, 447 |
| BpmI | CTGGAG | 4 cut(s) | 442, 2933, 3608, 4221 |
| BpuEI | CTTGAG | 9 cut(s) | 181, 820, 843, 1557, 1805, 2087, 2507, 2848, 3127 |
| BpuMI | CCSGG | 2 cut(s) | 2883, 2973 |
| Bsa29I | ATCGAT | 1 cut(s) | 135 |
| BsaAI | YACGTR | 1 cut(s) | 750 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1266 |
| BsaI | GGTCTC | 3 cut(s) | 1476, 3200, 4211 |
| BsaJI | CCNNGG | 4 cut(s) | 1229, 2882, 3979, 4516 |
| BsaWI | WCCGGW | 4 cut(s) | 2599, 2629, 2740, 3160 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 4268, 4298 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1109, 1529, 3628 |
| Bse1I | ACTGG | 8 cut(s) | 1523, 2065, 2275, 2485, 2916, 3788, 4204, 4506 |
| Bse3DI | GCAATG | 3 cut(s) | 582, 1114, 4491 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1266 |
| BseAI | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| BseBI | CCWGG | 5 cut(s) | 272, 1230, 3723, 3848, 3980 |
| BseCI | ATCGAT | 1 cut(s) | 135 |
| BseDI | CCNNGG | 4 cut(s) | 1229, 2882, 3979, 4516 |
| BseGI | GGATG | 8 cut(s) | 487, 979, 1504, 1607, 1832, 3373, 4399, 4450 |
| BseJI | GATNNNNATC | 1 cut(s) | 1266 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1109, 1529, 3628 |
| BseMI | GCAATG | 3 cut(s) | 582, 1114, 4491 |
| BseMII | CTCAG | 4 cut(s) | 163, 1347, 1761, 3596 |
| BseNI | ACTGG | 8 cut(s) | 1523, 2065, 2275, 2485, 2916, 3788, 4204, 4506 |
| BseYI | CCCAGC | 1 cut(s) | 459 |
| BsgI | GTGCAG | 2 cut(s) | 3430, 3814 |
| Bsh1236I | CGCG | 1 cut(s) | 469 |
| BshFI | GGCC | 4 cut(s) | 90, 647, 3286, 4052 |
| BshNI | GGYRCC | 1 cut(s) | 304 |
| BshVI | ATCGAT | 1 cut(s) | 135 |
| BsiHKAI | GWGCWC | 4 cut(s) | 106, 261, 1138, 4403 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3188, 4402 |
| BsiSI | CCGG | 6 cut(s) | 2600, 2630, 2741, 2882, 2972, 3161 |
| BsiWI | CGTACG | 1 cut(s) | 3590 |
| BslFI | GGGAC | 8 cut(s) | 1011, 1568, 2032, 2242, 2452, 2662, 2944, 4210 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1109, 1529, 3628 |
| BsmFI | GGGAC | 8 cut(s) | 1011, 1568, 2032, 2242, 2452, 2662, 2944, 4210 |
| BsmI | GAATGC | 5 cut(s) | 1313, 1908, 2820, 3099, 4161 |
| BsnI | GGCC | 4 cut(s) | 90, 647, 3286, 4052 |
| Bso31I | GGTCTC | 3 cut(s) | 1476, 3200, 4211 |
| BsoBI | CYCGRG | 2 cut(s) | 3188, 4402 |
| Bsp1286I | GDGCHC | 5 cut(s) | 106, 150, 261, 1138, 4403 |
| Bsp13I | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| BspANI | GGCC | 4 cut(s) | 90, 647, 3286, 4052 |
| BspCNI | CTCAG | 4 cut(s) | 162, 1346, 1762, 3595 |
| BspDI | ATCGAT | 1 cut(s) | 135 |
| BspEI | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| BspFNI | CGCG | 1 cut(s) | 469 |
| BspHI | TCATGA | 3 cut(s) | 1545, 2616, 2898 |
| BspLI | GGNNCC | 4 cut(s) | 306, 1931, 2650, 4420 |
| BspMI | ACCTGC | 2 cut(s) | 3699, 3798 |
| BspPI | GGATC | 7 cut(s) | 320, 1875, 1924, 1937, 2787, 3066, 4006 |
| BspQI | GCTCTTC | 2 cut(s) | 410, 1851 |
| BspT107I | GGYRCC | 1 cut(s) | 304 |
| BspTI | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| BspTNI | GGTCTC | 3 cut(s) | 1476, 3200, 4211 |
| BsrBI | CCGCTC | 2 cut(s) | 431, 1844 |
| BsrDI | GCAATG | 3 cut(s) | 582, 1114, 4491 |
| BsrI | ACTGG | 8 cut(s) | 1523, 2065, 2275, 2485, 2916, 3788, 4204, 4506 |
| BssECI | CCNNGG | 4 cut(s) | 1229, 2882, 3979, 4516 |
| BssT1I | CCWWGG | 1 cut(s) | 4516 |
| Bst2UI | CCWGG | 5 cut(s) | 272, 1230, 3723, 3848, 3980 |
| BstAFI | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4481 |
| BstBAI | YACGTR | 1 cut(s) | 750 |
| BstC8I | GCNNGC | 3 cut(s) | 491, 2763, 3484 |
| BstDEI | CTNAG | 8 cut(s) | 149, 719, 980, 1333, 1385, 1770, 3582, 4157 |
| BstF5I | GGATG | 8 cut(s) | 487, 979, 1504, 1607, 1832, 3373, 4399, 4450 |
| BstFNI | CGCG | 1 cut(s) | 469 |
| BstH2I | RGCGCY | 1 cut(s) | 3047 |
| BstHHI | GCGC | 4 cut(s) | 471, 1239, 3046, 3541 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 1298, 1448, 2212, 2422, 2632, 2914, 3190, 4107, 4481 |
| BstNI | CCWGG | 5 cut(s) | 272, 1230, 3723, 3848, 3980 |
| BstNSI | RCATGY | 5 cut(s) | 668, 1041, 1171, 1663, 3976 |
| BstSCI | CCNGG | 7 cut(s) | 270, 1228, 2881, 2971, 3721, 3846, 3978 |
| BstSFI | CTRYAG | 3 cut(s) | 1293, 2345, 3307 |
| BstUI | CGCG | 1 cut(s) | 469 |
| BstV2I | GAAGAC | 3 cut(s) | 37, 72, 3107 |
| BstX2I | RGATCY | 6 cut(s) | 78, 325, 1867, 1929, 2779, 3058 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3795 |
| BstYI | RGATCY | 6 cut(s) | 78, 325, 1867, 1929, 2779, 3058 |
| Bsu15I | ATCGAT | 1 cut(s) | 135 |
| BsuI | GTATCC | 1 cut(s) | 277 |
| BsuRI | GGCC | 4 cut(s) | 90, 647, 3286, 4052 |
| BsuTUI | ATCGAT | 1 cut(s) | 135 |
| BtgZI | GCGATG | 1 cut(s) | 1018 |
| BtrI | CACGTC | 1 cut(s) | 183 |
| BtsCI | GGATG | 8 cut(s) | 487, 979, 1504, 1607, 1832, 3373, 4399, 4450 |
| BtsI | GCAGTG | 1 cut(s) | 4322 |
| BtsIMutI | CAGTG | 8 cut(s) | 1735, 2058, 2268, 2478, 3831, 4044, 4260, 4322 |
| BveI | ACCTGC | 2 cut(s) | 3699, 3798 |
| Cac8I | GCNNGC | 3 cut(s) | 491, 2763, 3484 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2751 |
| CciI | TCATGA | 3 cut(s) | 1545, 2616, 2898 |
| CfoI | GCGC | 4 cut(s) | 471, 1239, 3046, 3541 |
| Cfr13I | GGNCC | 5 cut(s) | 426, 645, 2649, 3284, 3802 |
| ClaI | ATCGAT | 1 cut(s) | 135 |
| Csp6I | GTAC | 5 cut(s) | 3586, 3591, 3632, 3688, 3894 |
| CviQI | GTAC | 5 cut(s) | 3586, 3591, 3632, 3688, 3894 |
| DdeI | CTNAG | 8 cut(s) | 149, 719, 980, 1333, 1385, 1770, 3582, 4157 |
| DraI | TTTAAA | 2 cut(s) | 756, 1492 |
| DraIII | CACNNNGTG | 1 cut(s) | 246 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3274 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3274 |
| EaeI | YGGCCR | 2 cut(s) | 88, 4050 |
| EciI | GGCGGA | 1 cut(s) | 1196 |
| Ecl136II | GAGCTC | 2 cut(s) | 104, 259 |
| Eco130I | CCWWGG | 1 cut(s) | 4516 |
| Eco24I | GRGCYC | 3 cut(s) | 106, 150, 261 |
| Eco31I | GGTCTC | 3 cut(s) | 1476, 3200, 4211 |
| Eco47I | GGWCC | 3 cut(s) | 426, 2649, 3802 |
| Eco53kI | GAGCTC | 2 cut(s) | 104, 259 |
| Eco57I | CTGAAG | 7 cut(s) | 162, 596, 1874, 2540, 2822, 3101, 3686 |
| Eco88I | CYCGRG | 2 cut(s) | 3188, 4402 |
| EcoICRI | GAGCTC | 2 cut(s) | 104, 259 |
| EcoRII | CCWGG | 5 cut(s) | 270, 1228, 3721, 3846, 3978 |
| EcoT14I | CCWWGG | 1 cut(s) | 4516 |
| EcoT22I | ATGCAT | 3 cut(s) | 670, 1173, 1352 |
| EcoT38I | GRGCYC | 3 cut(s) | 106, 150, 261 |
| ErhI | CCWWGG | 1 cut(s) | 4516 |
| FaqI | GGGAC | 8 cut(s) | 1011, 1568, 2032, 2242, 2452, 2662, 2944, 4210 |
| FauI | CCCGC | 4 cut(s) | 80, 1112, 3745, 4176 |
| FauNDI | CATATG | 7 cut(s) | 1592, 1914, 2124, 2334, 2544, 2826, 3105 |
| FbaI | TGATCA | 2 cut(s) | 1006, 4135 |
| FblI | GTMKAC | 2 cut(s) | 399, 1164 |
| FokI | GGATG | 8 cut(s) | 494, 986, 1511, 1614, 1819, 3380, 4406, 4457 |
| FriOI | GRGCYC | 3 cut(s) | 106, 150, 261 |
| FspAI | RTGCGCAY | 1 cut(s) | 3540 |
| FspI | TGCGCA | 1 cut(s) | 3540 |
| GlaI | GCGC | 4 cut(s) | 470, 1238, 3045, 3540 |
| GsaI | CCCAGC | 1 cut(s) | 463 |
| GsuI | CTGGAG | 4 cut(s) | 442, 2933, 3608, 4221 |
| HaeII | RGCGCY | 1 cut(s) | 3047 |
| HaeIII | GGCC | 4 cut(s) | 90, 647, 3286, 4052 |
| HapII | CCGG | 6 cut(s) | 2600, 2630, 2741, 2882, 2972, 3161 |
| HhaI | GCGC | 4 cut(s) | 471, 1239, 3046, 3541 |
| Hin6I | GCGC | 4 cut(s) | 469, 1237, 3044, 3539 |
| HinP1I | GCGC | 4 cut(s) | 469, 1237, 3044, 3539 |
| HincII | GTYRAC | 4 cut(s) | 400, 1129, 1165, 1342 |
| HindII | GTYRAC | 4 cut(s) | 400, 1129, 1165, 1342 |
| HindIII | AAGCTT | 4 cut(s) | 366, 491, 988, 3480 |
| HpaII | CCGG | 6 cut(s) | 2600, 2630, 2741, 2882, 2972, 3161 |
| HphI | GGTGA | 4 cut(s) | 686, 1643, 3739, 3926 |
| Hpy166II | GTNNAC | 8 cut(s) | 400, 1129, 1165, 1342, 1538, 1651, 3747, 4186 |
| Hpy8I | GTNNAC | 8 cut(s) | 400, 1129, 1165, 1342, 1538, 1651, 3747, 4186 |
| Hpy99I | CGWCG | 2 cut(s) | 89, 401 |
| HpyCH4IV | ACGT | 6 cut(s) | 182, 396, 749, 1983, 2193, 2403 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 1298, 1448, 2212, 2422, 2632, 2914, 3190, 4107, 4481 |
| HpyF3I | CTNAG | 8 cut(s) | 149, 719, 980, 1333, 1385, 1770, 3582, 4157 |
| HpySE526I | ACGT | 6 cut(s) | 182, 396, 749, 1983, 2193, 2403 |
| HspAI | GCGC | 4 cut(s) | 469, 1237, 3044, 3539 |
| Kpn2I | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| Ksp22I | TGATCA | 2 cut(s) | 1006, 4135 |
| LguI | GCTCTTC | 2 cut(s) | 410, 1851 |
| LmnI | GCTCC | 8 cut(s) | 1993, 2203, 2413, 2623, 2632, 2905, 2914, 3181 |
| LweI | GCATC | 7 cut(s) | 1288, 1592, 3475, 3526, 4110, 4396, 4501 |
| MaeII | ACGT | 6 cut(s) | 182, 396, 749, 1983, 2193, 2403 |
| MbiI | CCGCTC | 2 cut(s) | 431, 1844 |
| MfeI | CAATTG | 3 cut(s) | 441, 2676, 3234 |
| MflI | RGATCY | 6 cut(s) | 78, 325, 1867, 1929, 2779, 3058 |
| MhlI | GDGCHC | 5 cut(s) | 106, 150, 261, 1138, 4403 |
| MlsI | TGGCCA | 1 cut(s) | 4052 |
| MluNI | TGGCCA | 1 cut(s) | 4052 |
| MmeI | TCCRAC | 6 cut(s) | 547, 616, 915, 3336, 3780, 4422 |
| Mox20I | TGGCCA | 1 cut(s) | 4052 |
| Mph1103I | ATGCAT | 3 cut(s) | 670, 1173, 1352 |
| MroI | TCCGGA | 3 cut(s) | 2599, 2740, 3160 |
| MroXI | GAANNNNTTC | 5 cut(s) | 574, 2175, 2385, 2595, 3018 |
| MscI | TGGCCA | 1 cut(s) | 4052 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1913, 2643, 2825, 2925, 3104, 4392 |
| Msp20I | TGGCCA | 1 cut(s) | 4052 |
| MspA1I | CMGCKG | 1 cut(s) | 3628 |
| MspCI | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| MspI | CCGG | 6 cut(s) | 2600, 2630, 2741, 2882, 2972, 3161 |
| MspR9I | CCNGG | 7 cut(s) | 272, 1230, 2883, 2973, 3723, 3848, 3980 |
| MunI | CAATTG | 3 cut(s) | 441, 2676, 3234 |
| Mva1269I | GAATGC | 5 cut(s) | 1313, 1908, 2820, 3099, 4161 |
| MvaI | CCWGG | 5 cut(s) | 272, 1230, 3723, 3848, 3980 |
| MvnI | CGCG | 1 cut(s) | 469 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 1298, 1448, 2212, 2422, 2632, 2914, 3190, 4107, 4481 |
| NciI | CCSGG | 2 cut(s) | 2883, 2973 |
| NdeI | CATATG | 7 cut(s) | 1592, 1914, 2124, 2334, 2544, 2826, 3105 |
| NlaIV | GGNNCC | 4 cut(s) | 306, 1931, 2650, 4420 |
| NmuCI | GTSAC | 6 cut(s) | 1670, 1733, 1739, 3341, 3436, 4004 |
| NsbI | TGCGCA | 1 cut(s) | 3540 |
| NsiI | ATGCAT | 3 cut(s) | 670, 1173, 1352 |
| NspI | RCATGY | 5 cut(s) | 668, 1041, 1171, 1663, 3976 |
| PagI | TCATGA | 3 cut(s) | 1545, 2616, 2898 |
| PciI | ACATGT | 2 cut(s) | 1659, 3972 |
| PciSI | GCTCTTC | 2 cut(s) | 410, 1851 |
| PctI | GAATGC | 5 cut(s) | 1313, 1908, 2820, 3099, 4161 |
| PdmI | GAANNNNTTC | 5 cut(s) | 574, 2175, 2385, 2595, 3018 |
| Pfl23II | CGTACG | 1 cut(s) | 3590 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1529 |
| PfoI | TCCNGGA | 3 cut(s) | 270, 2971, 3721 |
| Ppu21I | YACGTR | 1 cut(s) | 750 |
| PscI | ACATGT | 2 cut(s) | 1659, 3972 |
| Psp124BI | GAGCTC | 2 cut(s) | 106, 261 |
| Psp6I | CCWGG | 5 cut(s) | 270, 1228, 3721, 3846, 3978 |
| PspFI | CCCAGC | 1 cut(s) | 459 |
| PspGI | CCWGG | 5 cut(s) | 270, 1228, 3721, 3846, 3978 |
| PspLI | CGTACG | 1 cut(s) | 3590 |
| PspN4I | GGNNCC | 4 cut(s) | 306, 1931, 2650, 4420 |
| PspPI | GGNCC | 5 cut(s) | 426, 645, 2649, 3284, 3802 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2751 |
| PsuI | RGATCY | 6 cut(s) | 78, 325, 1867, 1929, 2779, 3058 |
| PvuII | CAGCTG | 1 cut(s) | 3628 |
| RsaI | GTAC | 5 cut(s) | 3587, 3592, 3633, 3689, 3895 |
| RsaNI | GTAC | 5 cut(s) | 3586, 3591, 3632, 3688, 3894 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1913, 2643, 2825, 2925, 3104, 4392 |
| SacI | GAGCTC | 2 cut(s) | 106, 261 |
| SalI | GTCGAC | 2 cut(s) | 398, 1163 |
| SapI | GCTCTTC | 2 cut(s) | 410, 1851 |
| Sau96I | GGNCC | 5 cut(s) | 426, 645, 2649, 3284, 3802 |
| ScrFI | CCNGG | 7 cut(s) | 272, 1230, 2883, 2973, 3723, 3848, 3980 |
| SduI | GDGCHC | 5 cut(s) | 106, 150, 261, 1138, 4403 |
| SfaNI | GCATC | 7 cut(s) | 1288, 1592, 3475, 3526, 4110, 4396, 4501 |
| SfcI | CTRYAG | 3 cut(s) | 1293, 2345, 3307 |
| SinI | GGWCC | 3 cut(s) | 426, 2649, 3802 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1913, 2643, 2825, 2925, 3104, 4392 |
| SspI | AATATT | 1 cut(s) | 3262 |
| SstI | GAGCTC | 2 cut(s) | 106, 261 |
| StyD4I | CCNGG | 7 cut(s) | 270, 1228, 2881, 2971, 3721, 3846, 3978 |
| StyI | CCWWGG | 1 cut(s) | 4516 |
| TaiI | ACGT | 6 cut(s) | 185, 399, 752, 1986, 2196, 2406 |
| TaqII | GACCGA | 1 cut(s) | 3951 |
| TscAI | CASTG | 8 cut(s) | 1742, 2065, 2275, 2485, 3838, 4051, 4267, 4329 |
| TseFI | GTSAC | 6 cut(s) | 1670, 1733, 1739, 3341, 3436, 4004 |
| Tsp45I | GTSAC | 6 cut(s) | 1670, 1733, 1739, 3341, 3436, 4004 |
| TspGWI | ACGGA | 8 cut(s) | 355, 1494, 1942, 2006, 2216, 2426, 3342, 4411 |
| TspRI | CASTG | 8 cut(s) | 1742, 2065, 2275, 2485, 3838, 4051, 4267, 4329 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1529 |
| Vha464I | CTTAAG | 7 cut(s) | 2099, 2276, 2309, 2519, 2801, 3080, 3125 |
| VpaK11BI | GGWCC | 3 cut(s) | 426, 2649, 3802 |
| XapI | RAATTY | 4 cut(s) | 966, 2000, 4079, 4266 |
| XbaI | TCTAGA | 4 cut(s) | 1027, 2011, 2221, 2431 |
| XceI | RCATGY | 5 cut(s) | 668, 1041, 1171, 1663, 3976 |
| XmiI | GTMKAC | 2 cut(s) | 399, 1164 |
| XmnI | GAANNNNTTC | 5 cut(s) | 574, 2175, 2385, 2595, 3018 |
| Zsp2I | ATGCAT | 3 cut(s) | 670, 1173, 1352 |