Rmu_sc0006415.1_g000014

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006415.1
OG0000067
Physical Location & Seq
Reverse (-)
74795 .. 76601
1807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006415.1_g000014.1.cds

Sequence Viewer

Length: 1254 bp
atggagaagctatgggagcttaaattagacgggacagtaattaaagaactaccctcatctattaataatcttacggggcttcgggagttgagtttgacaaactgcacaagccttgtcagtcttccggacaatatctgcaatttggcatggctttattatctatatctgactgggtgctctaacctttcgaagttgcctgagaagtttgggaatttggaatccttggggaagtatgacgtcagcttccttgaactggagggaagtggtataaaacaacttccattctctatcttgtgtatggaatcattatcatgtaatggatgtaaagagatgacggcgcccttttcctcgtggccaacatggaaccaccaaaatcctagctactctgttctcatcgatcttgatttaagtgactgcaatctcttggaattatcggatggtattgctcatttatcttcattggaagtattaaggctgtacagaaatgagaatttggaaagtttgcctgcagcaatgaatcgcctggtttcaacaccacagcctccgtacgctgagaacattctcttccaattttttaattgcttcaagttggtggtcagtaccaatatatttatagatattgtggaaagtgctactgataatcaggattatgattctgttttttggtcttaccgtttgtctcttcctggaagtgatattccagattggttcaaccatcagagtagagggtcttccgtaactgtgccgttagcacccaattggctcgcaaacaactttctggggttcgctatatgcgccatcggacaatttctattttccattgcccacacctgtgccgctgtgcgggatggaactgacgggccccttgagttggatcatatgttgctgggatatacaaatttccgaagttttggagggtggcgtaatgaacgcaaatacaccgaggccagatttaggataatggcagatcgggaagattgcacttgggtcacaagttgcggggttcggacatctcttgccagcaataccatctctctcacatggatatggcagcaagctttcaatacaatcccagtcttgttcaaagttcaaacccagattgacctcacttcaccaaaatatgactcttgcaaagcaccagatctgagaagaacctatgtttggcgtctgtcaatctccttcataatcatgcgagcttgcatgaaagatctatcttactctcaacaacgtccttccgatctaatgctactgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

417

Amino Acids

47.3

Weight (kDa)

5.1

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 337
AccIII TCCGGA 1 cut(s) 124
AciI CCGC 3 cut(s) 837, 844, 999
AclWI GGATC 1 cut(s) 882
AcoI YGGCCR 1 cut(s) 353
AcsI RAATTY 3 cut(s) 211, 490, 898
AcyI GRCGYC 3 cut(s) 237, 338, 1165
AfaI GTAC 3 cut(s) 479, 548, 601
AfiI CCNNNNNNNGG 5 cut(s) 253, 843, 871, 954, 1161
AgsI TTSAA 7 cut(s) 251, 531, 586, 712, 1063, 1084, 1091
AjnI CCWGG 2 cut(s) 522, 685
AjuI GAANNNNNNNTTGG 2 cut(s) 1144, 1176
AleI CACNNNNGTG 1 cut(s) 831
AluBI AGCT 6 cut(s) 10, 19, 243, 381, 1058, 1196
AluI AGCT 6 cut(s) 10, 19, 243, 381, 1058, 1196
Alw21I GWGCWC 1 cut(s) 179
Alw26I GTCTC 1 cut(s) 684
AlwI GGATC 1 cut(s) 882
Aor13HI TCCGGA 1 cut(s) 124
AoxI GGCC 3 cut(s) 353, 860, 945
ApaI GGGCCC 1 cut(s) 864
ApeKI GCWGC 2 cut(s) 509, 1051
ApoI RAATTY 3 cut(s) 211, 490, 898
AseI ATTAAT 1 cut(s) 63
AspLEI GCGC 2 cut(s) 340, 797
AspS9I GGNCC 2 cut(s) 860, 861
AsuHPI GGTGA 1 cut(s) 1104
AsuII TTCGAA 1 cut(s) 188
BaeGI GKGCMC 1 cut(s) 864
BalI TGGCCA 1 cut(s) 355
BanI GGYRCC 1 cut(s) 337
BanII GRGCYC 1 cut(s) 864
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BauI CACGAG 1 cut(s) 349
BbsI GAAGAC 2 cut(s) 113, 723
Bbv12I GWGCWC 1 cut(s) 179
BbvI GCAGC 2 cut(s) 521, 1063
BccI CCATC 5 cut(s) 431, 723, 806, 842, 1037
BceAI ACGGC 2 cut(s) 351, 730
BciT130I CCWGG 2 cut(s) 524, 687
BcoDI GTCTC 1 cut(s) 684
BfaI CTAG 1 cut(s) 378
BfmI CTRYAG 2 cut(s) 507, 1250
BfoI RGCGCY 1 cut(s) 341
BglII AGATCT 2 cut(s) 1141, 1207
BisI GCNGC 3 cut(s) 510, 837, 1052
BlsI GCNGC 3 cut(s) 511, 838, 1053
Bme1390I CCNGG 2 cut(s) 524, 687
BmgT120I GGNCC 2 cut(s) 860, 861
BmiI GGNNCC 4 cut(s) 339, 365, 862, 863
BmrFI CCNGG 2 cut(s) 524, 687
BmrI ACTGGG 2 cut(s) 180, 1067
BmuI ACTGGG 2 cut(s) 180, 1067
BpiI GAAGAC 2 cut(s) 113, 723
BpmI CTGGAG 1 cut(s) 275
Bpu14I TTCGAA 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 887
Bsa29I ATCGAT 1 cut(s) 396
BsaHI GRCGYC 3 cut(s) 237, 338, 1165
BsaJI CCNNGG 2 cut(s) 222, 942
BsaWI WCCGGW 1 cut(s) 124
Bsc4I CCNNNNNNNGG 5 cut(s) 253, 843, 871, 954, 1161
Bse1I ACTGG 3 cut(s) 175, 258, 1073
Bse3DI GCAATG 2 cut(s) 519, 819
BseAI TCCGGA 1 cut(s) 124
BseBI CCWGG 2 cut(s) 524, 687
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 2 cut(s) 222, 942
BseGI GGATG 3 cut(s) 326, 442, 853
BseLI CCNNNNNNNGG 5 cut(s) 253, 843, 871, 954, 1161
BseMI GCAATG 2 cut(s) 519, 819
BseMII CTCAG 3 cut(s) 189, 543, 1136
BseNI ACTGG 3 cut(s) 175, 258, 1073
BseSI GKGCMC 1 cut(s) 864
BseXI GCAGC 2 cut(s) 521, 1063
BseYI CCCAGC 1 cut(s) 886
BsgI GTGCAG 1 cut(s) 88
BshFI GGCC 3 cut(s) 355, 862, 947
BshNI GGYRCC 1 cut(s) 337
BshVI ATCGAT 1 cut(s) 396
BsiHKAI GWGCWC 1 cut(s) 179
BsiSI CCGG 1 cut(s) 125
BsiWI CGTACG 1 cut(s) 546
BslFI GGGAC 1 cut(s) 46
BslI CCNNNNNNNGG 5 cut(s) 253, 843, 871, 954, 1161
BsmAI GTCTC 1 cut(s) 684
BsmFI GGGAC 1 cut(s) 46
BsnI GGCC 3 cut(s) 355, 862, 947
Bsp119I TTCGAA 1 cut(s) 188
Bsp120I GGGCCC 1 cut(s) 860
Bsp1286I GDGCHC 2 cut(s) 179, 864
Bsp13I TCCGGA 1 cut(s) 124
Bsp1407I TGTACA 1 cut(s) 477
Bsp143I GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
BspACI CCGC 3 cut(s) 837, 844, 999
BspANI GGCC 3 cut(s) 355, 862, 947
BspCNI CTCAG 3 cut(s) 190, 544, 1137
BspDI ATCGAT 1 cut(s) 396
BspEI TCCGGA 1 cut(s) 124
BspLI GGNNCC 4 cut(s) 339, 365, 862, 863
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 1 cut(s) 882
BspT104I TTCGAA 1 cut(s) 188
BspT107I GGYRCC 1 cut(s) 337
BsrDI GCAATG 2 cut(s) 519, 819
BsrGI TGTACA 1 cut(s) 477
BsrI ACTGG 3 cut(s) 175, 258, 1073
BssECI CCNNGG 2 cut(s) 222, 942
BssMI GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
BssNI GRCGYC 3 cut(s) 237, 338, 1165
BssSI CACGAG 1 cut(s) 349
BssT1I CCWWGG 1 cut(s) 222
Bst2BI CACGAG 1 cut(s) 349
Bst2UI CCWGG 2 cut(s) 524, 687
Bst4CI ACNGT 4 cut(s) 37, 674, 742, 1251
Bst6I CTCTTC 2 cut(s) 569, 687
BstACI GRCGYC 3 cut(s) 237, 338, 1165
BstAUI TGTACA 1 cut(s) 477
BstBI TTCGAA 1 cut(s) 188
BstC8I GCNNGC 6 cut(s) 507, 765, 1021, 1056, 1194, 1198
BstDEI CTNAG 3 cut(s) 198, 552, 1145
BstF5I GGATG 3 cut(s) 326, 442, 853
BstH2I RGCGCY 1 cut(s) 341
BstHHI GCGC 2 cut(s) 340, 797
BstKTI GATC 6 cut(s) 400, 877, 970, 1144, 1210, 1240
BstMAI GTCTC 1 cut(s) 684
BstMBI GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
BstMWI GCNNNNNNNGC 2 cut(s) 16, 794
BstNI CCWGG 2 cut(s) 524, 687
BstSCI CCNGG 2 cut(s) 522, 685
BstSFI CTRYAG 2 cut(s) 507, 1250
BstSLI GKGCMC 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 521, 1063
BstV2I GAAGAC 2 cut(s) 113, 723
BstX2I RGATCY 2 cut(s) 1141, 1207
BstYI RGATCY 2 cut(s) 1141, 1207
Bsu15I ATCGAT 1 cut(s) 396
BsuRI GGCC 3 cut(s) 355, 862, 947
BsuTUI ATCGAT 1 cut(s) 396
BtsCI GGATG 3 cut(s) 326, 442, 853
Cac8I GCNNGC 6 cut(s) 507, 765, 1021, 1056, 1194, 1198
CfoI GCGC 2 cut(s) 340, 797
Cfr13I GGNCC 2 cut(s) 860, 861
ClaI ATCGAT 1 cut(s) 396
CseI GACGC 1 cut(s) 1154
Csp6I GTAC 3 cut(s) 478, 547, 600
CviAII CATG 6 cut(s) 147, 312, 360, 1041, 1189, 1201
CviQI GTAC 3 cut(s) 478, 547, 600
DdeI CTNAG 3 cut(s) 198, 552, 1145
DinI GGCGCC 1 cut(s) 339
DpnI GATC 6 cut(s) 399, 876, 969, 1143, 1209, 1239
DpnII GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
EaeI YGGCCR 1 cut(s) 353
Eam1104I CTCTTC 2 cut(s) 569, 687
EarI CTCTTC 2 cut(s) 569, 687
Eco130I CCWWGG 1 cut(s) 222
Eco24I GRGCYC 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 861
EcoRII CCWGG 2 cut(s) 522, 685
EcoT14I CCWWGG 1 cut(s) 222
EcoT38I GRGCYC 1 cut(s) 864
EgeI GGCGCC 1 cut(s) 339
EheI GGCGCC 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 222
FaeI CATG 6 cut(s) 150, 315, 363, 1044, 1192, 1204
FaqI GGGAC 1 cut(s) 46
FatI CATG 6 cut(s) 146, 311, 359, 1040, 1188, 1200
FauI CCCGC 2 cut(s) 837, 992
FauNDI CATATG 1 cut(s) 879
Fnu4HI GCNGC 3 cut(s) 510, 837, 1052
FokI GGATG 3 cut(s) 333, 449, 860
FriOI GRGCYC 1 cut(s) 864
Fsp4HI GCNGC 3 cut(s) 510, 837, 1052
FspBI CTAG 1 cut(s) 378
GlaI GCGC 2 cut(s) 339, 796
GluI GCNGC 3 cut(s) 510, 837, 1052
GsaI CCCAGC 1 cut(s) 890
GsuI CTGGAG 1 cut(s) 275
HaeII RGCGCY 1 cut(s) 341
HaeIII GGCC 3 cut(s) 355, 862, 947
HapII CCGG 1 cut(s) 125
HgaI GACGC 1 cut(s) 1154
HhaI GCGC 2 cut(s) 340, 797
Hin1I GRCGYC 3 cut(s) 237, 338, 1165
Hin1II CATG 6 cut(s) 150, 315, 363, 1044, 1192, 1204
Hin6I GCGC 2 cut(s) 338, 795
HinP1I GCGC 2 cut(s) 338, 795
HindIII AAGCTT 1 cut(s) 1056
HinfI GANTC 5 cut(s) 218, 302, 517, 653, 1124
HpaII CCGG 1 cut(s) 125
HphI GGTGA 1 cut(s) 1104
Hpy188I TCNGA 8 cut(s) 168, 436, 720, 803, 905, 1008, 1146, 1237
Hpy188III TCNNGA 6 cut(s) 83, 125, 401, 644, 701, 971
HpyAV CCTTC 2 cut(s) 1189, 1242
HpyCH4III ACNGT 4 cut(s) 37, 674, 742, 1251
HpyCH4IV ACGT 2 cut(s) 237, 1228
HpyCH4V TGCA 7 cut(s) 105, 138, 417, 509, 981, 1131, 1200
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 794
HpyF3I CTNAG 3 cut(s) 198, 552, 1145
HpySE526I ACGT 2 cut(s) 237, 1228
Hsp92I GRCGYC 3 cut(s) 237, 338, 1165
Hsp92II CATG 6 cut(s) 150, 315, 363, 1044, 1192, 1204
HspAI GCGC 2 cut(s) 338, 795
KasI GGCGCC 1 cut(s) 337
Kpn2I TCCGGA 1 cut(s) 124
Kzo9I GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
LmnI GCTCC 1 cut(s) 16
Lsp1109I GCAGC 2 cut(s) 521, 1063
MaeI CTAG 1 cut(s) 378
MaeII ACGT 2 cut(s) 237, 1228
MaeIII GTNAC 3 cut(s) 410, 736, 988
MalI GATC 6 cut(s) 399, 876, 969, 1143, 1209, 1239
MboI GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
MboII GAAGA 7 cut(s) 113, 447, 556, 674, 723, 986, 1161
MfeI CAATTG 1 cut(s) 757
MflI RGATCY 2 cut(s) 1141, 1207
MhlI GDGCHC 2 cut(s) 179, 864
MlsI TGGCCA 1 cut(s) 355
MluNI TGGCCA 1 cut(s) 355
Mly113I GGCGCC 1 cut(s) 338
MlyI GAGTC 1 cut(s) 1118
MmeI TCCRAC 1 cut(s) 852
MnlI CCTC 8 cut(s) 64, 250, 358, 552, 719, 908, 937, 1115
Mox20I TGGCCA 1 cut(s) 355
MroI TCCGGA 1 cut(s) 124
MscI TGGCCA 1 cut(s) 355
MseI TTAA 6 cut(s) 21, 42, 63, 407, 470, 576
MslI CAYNNNNRTG 4 cut(s) 310, 831, 1045, 1187
Msp20I TGGCCA 1 cut(s) 355
MspA1I CMGCKG 1 cut(s) 839
MspI CCGG 1 cut(s) 125
MspR9I CCNGG 2 cut(s) 524, 687
MunI CAATTG 1 cut(s) 757
MvaI CCWGG 2 cut(s) 524, 687
MwoI GCNNNNNNNGC 2 cut(s) 16, 794
NarI GGCGCC 1 cut(s) 338
NdeI CATATG 1 cut(s) 879
NdeII GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
NlaIII CATG 6 cut(s) 150, 315, 363, 1044, 1192, 1204
NlaIV GGNNCC 4 cut(s) 339, 365, 862, 863
NmuCI GTSAC 2 cut(s) 410, 988
NspV TTCGAA 1 cut(s) 188
OliI CACNNNNGTG 1 cut(s) 831
PfeI GAWTC 4 cut(s) 218, 302, 517, 653
Pfl23II CGTACG 1 cut(s) 546
PfoI TCCNGGA 1 cut(s) 685
PkrI GCNGC 3 cut(s) 511, 838, 1053
PleI GAGTC 1 cut(s) 1118
PluTI GGCGCC 1 cut(s) 341
PpsI GAGTC 1 cut(s) 1118
PshBI ATTAAT 1 cut(s) 63
Psp6I CCWGG 2 cut(s) 522, 685
PspFI CCCAGC 1 cut(s) 886
PspGI CCWGG 2 cut(s) 522, 685
PspLI CGTACG 1 cut(s) 546
PspN4I GGNNCC 4 cut(s) 339, 365, 862, 863
PspOMI GGGCCC 1 cut(s) 860
PspPI GGNCC 2 cut(s) 860, 861
PstI CTGCAG 1 cut(s) 511
PsuI RGATCY 2 cut(s) 1141, 1207
RsaI GTAC 3 cut(s) 479, 548, 601
RsaNI GTAC 3 cut(s) 478, 547, 600
RseI CAYNNNNRTG 4 cut(s) 310, 831, 1045, 1187
SaqAI TTAA 6 cut(s) 21, 42, 63, 407, 470, 576
SatI GCNGC 3 cut(s) 510, 837, 1052
Sau3AI GATC 6 cut(s) 397, 874, 967, 1141, 1207, 1237
Sau96I GGNCC 2 cut(s) 860, 861
SchI GAGTC 1 cut(s) 1118
ScrFI CCNGG 2 cut(s) 524, 687
SduI GDGCHC 2 cut(s) 179, 864
SfcI CTRYAG 2 cut(s) 507, 1250
SfoI GGCGCC 1 cut(s) 339
SfuI TTCGAA 1 cut(s) 188
SmiMI CAYNNNNRTG 4 cut(s) 310, 831, 1045, 1187
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
SsiI CCGC 3 cut(s) 837, 844, 999
SspDI GGCGCC 1 cut(s) 337
SspMI CTAG 1 cut(s) 378
StyD4I CCNGG 2 cut(s) 522, 685
StyI CCWWGG 1 cut(s) 222
TaaI ACNGT 4 cut(s) 37, 674, 742, 1251
TaiI ACGT 2 cut(s) 240, 1231
TaqI TCGA 2 cut(s) 188, 396
TatI WGTACW 1 cut(s) 477
TauI GCSGC 1 cut(s) 839
TfiI GAWTC 4 cut(s) 218, 302, 517, 653
Tru1I TTAA 6 cut(s) 21, 42, 63, 407, 470, 576
Tru9I TTAA 6 cut(s) 21, 42, 63, 407, 470, 576
TseFI GTSAC 2 cut(s) 410, 988
TseI GCWGC 2 cut(s) 509, 1051
Tsp45I GTSAC 2 cut(s) 410, 988
TspDTI ATGAA 5 cut(s) 447, 530, 942, 1171, 1217
TspGWI ACGGA 2 cut(s) 534, 724
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 3 cut(s) 211, 490, 898
XspI CTAG 1 cut(s) 378
ZraI GACGTC 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.