Leucine-rich repeats, outliers
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 2 - 55 | 9.4e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 12 - 81 | 6.9e-07 | Leucine-rich repeat region |
| LRR_EndoS | PF23952 | 15 - 109 | 6.5e-08 | Endo-beta-N-acetylglucosaminidase EndoS LRR domain |
| LRR_Zer-1 | PF25013 | 33 - 92 | 3.8e-07 | Zer-1-like, Leucine-rich repeats |
| LRR_13 | PF23286 | 56 - 128 | 1.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 58 - 119 | 3.8e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 415 |
| AflII | CTTAAG | 2 cut(s) | 137, 344 |
| AgsI | TTSAA | 2 cut(s) | 235, 439 |
| AjnI | CCWGG | 1 cut(s) | 53 |
| AluBI | AGCT | 1 cut(s) | 250 |
| AluI | AGCT | 1 cut(s) | 250 |
| ApeKI | GCWGC | 1 cut(s) | 195 |
| ApoI | RAATTY | 1 cut(s) | 415 |
| AseI | ATTAAT | 2 cut(s) | 87, 294 |
| AspS9I | GGNCC | 2 cut(s) | 115, 322 |
| AsuC2I | CCSGG | 1 cut(s) | 262 |
| AvaII | GGWCC | 2 cut(s) | 115, 322 |
| BauI | CACGAG | 1 cut(s) | 304 |
| BbsI | GAAGAC | 2 cut(s) | 137, 344 |
| BbvI | GCAGC | 1 cut(s) | 182 |
| BciT130I | CCWGG | 1 cut(s) | 55 |
| BcnI | CCSGG | 1 cut(s) | 262 |
| BfrI | CTTAAG | 2 cut(s) | 137, 344 |
| BisI | GCNGC | 1 cut(s) | 196 |
| BlsI | GCNGC | 1 cut(s) | 197 |
| Bme1390I | CCNGG | 2 cut(s) | 55, 262 |
| Bme18I | GGWCC | 2 cut(s) | 115, 322 |
| BmgT120I | GGNCC | 2 cut(s) | 115, 322 |
| BmrFI | CCNGG | 2 cut(s) | 55, 262 |
| BpiI | GAAGAC | 2 cut(s) | 137, 344 |
| BpuEI | CTTGAG | 2 cut(s) | 184, 227 |
| BpuMI | CCSGG | 1 cut(s) | 262 |
| BseBI | CCWGG | 1 cut(s) | 55 |
| BseXI | GCAGC | 1 cut(s) | 182 |
| BsiSI | CCGG | 1 cut(s) | 261 |
| BspTI | CTTAAG | 2 cut(s) | 137, 344 |
| BssSI | CACGAG | 1 cut(s) | 304 |
| Bst2BI | CACGAG | 1 cut(s) | 304 |
| Bst2UI | CCWGG | 1 cut(s) | 55 |
| BstAFI | CTTAAG | 2 cut(s) | 137, 344 |
| BstNI | CCWGG | 1 cut(s) | 55 |
| BstSCI | CCNGG | 2 cut(s) | 53, 260 |
| BstV1I | GCAGC | 1 cut(s) | 182 |
| BstV2I | GAAGAC | 2 cut(s) | 137, 344 |
| Cfr13I | GGNCC | 2 cut(s) | 115, 322 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 349, 384 |
| CviJI | RGCY | 3 cut(s) | 43, 195, 250 |
| CviKI_1 | RGCY | 3 cut(s) | 43, 195, 250 |
| Eco47I | GGWCC | 2 cut(s) | 115, 322 |
| EcoRII | CCWGG | 1 cut(s) | 53 |
| FaiI | YATR | 5 cut(s) | 26, 40, 164, 387, 448 |
| Fnu4HI | GCNGC | 1 cut(s) | 196 |
| Fsp4HI | GCNGC | 1 cut(s) | 196 |
| GluI | GCNGC | 1 cut(s) | 196 |
| HapII | CCGG | 1 cut(s) | 261 |
| HincII | GTYRAC | 1 cut(s) | 373 |
| HindII | GTYRAC | 1 cut(s) | 373 |
| HinfI | GANTC | 2 cut(s) | 142, 349 |
| HpaII | CCGG | 1 cut(s) | 261 |
| Hpy166II | GTNNAC | 1 cut(s) | 373 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 229 |
| Hpy188III | TCNNGA | 3 cut(s) | 8, 206, 218 |
| Hpy8I | GTNNAC | 1 cut(s) | 373 |
| HpyAV | CCTTC | 2 cut(s) | 229, 445 |
| HpyCH4V | TGCA | 3 cut(s) | 129, 336, 410 |
| Lsp1109I | GCAGC | 1 cut(s) | 182 |
| MboII | GAAGA | 3 cut(s) | 137, 344, 451 |
| MluCI | AATT | 7 cut(s) | 63, 84, 230, 270, 291, 317, 415 |
| MlyI | GAGTC | 2 cut(s) | 151, 358 |
| MmeI | TCCRAC | 2 cut(s) | 173, 380 |
| MnlI | CCTC | 5 cut(s) | 22, 88, 99, 295, 414 |
| MseI | TTAA | 9 cut(s) | 66, 87, 138, 183, 273, 294, 345, 377, 457 |
| MslI | CAYNNNNRTG | 1 cut(s) | 161 |
| MspCI | CTTAAG | 2 cut(s) | 137, 344 |
| MspI | CCGG | 1 cut(s) | 261 |
| MspR9I | CCNGG | 2 cut(s) | 55, 262 |
| MvaI | CCWGG | 1 cut(s) | 55 |
| NciI | CCSGG | 1 cut(s) | 262 |
| PkrI | GCNGC | 1 cut(s) | 197 |
| PleI | GAGTC | 2 cut(s) | 150, 357 |
| PpsI | GAGTC | 2 cut(s) | 150, 357 |
| PshBI | ATTAAT | 2 cut(s) | 87, 294 |
| Psp6I | CCWGG | 1 cut(s) | 53 |
| PspGI | CCWGG | 1 cut(s) | 53 |
| PspPI | GGNCC | 2 cut(s) | 115, 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 161 |
| SaqAI | TTAA | 9 cut(s) | 66, 87, 138, 183, 273, 294, 345, 377, 457 |
| SatI | GCNGC | 1 cut(s) | 196 |
| Sau96I | GGNCC | 2 cut(s) | 115, 322 |
| SchI | GAGTC | 2 cut(s) | 151, 358 |
| ScrFI | CCNGG | 2 cut(s) | 55, 262 |
| SetI | ASST | 5 cut(s) | 59, 120, 252, 327, 425 |
| SinI | GGWCC | 2 cut(s) | 115, 322 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 161 |
| SmlI | CTYRAG | 4 cut(s) | 137, 199, 206, 344 |
| SmoI | CTYRAG | 4 cut(s) | 137, 199, 206, 344 |
| Sse9I | AATT | 7 cut(s) | 63, 84, 230, 270, 291, 317, 415 |
| StyD4I | CCNGG | 2 cut(s) | 53, 260 |
| TasI | AATT | 7 cut(s) | 63, 84, 230, 270, 291, 317, 415 |
| Tru1I | TTAA | 9 cut(s) | 66, 87, 138, 183, 273, 294, 345, 377, 457 |
| Tru9I | TTAA | 9 cut(s) | 66, 87, 138, 183, 273, 294, 345, 377, 457 |
| TseI | GCWGC | 1 cut(s) | 195 |
| TspDTI | ATGAA | 1 cut(s) | 179 |
| Vha464I | CTTAAG | 2 cut(s) | 137, 344 |
| VpaK11BI | GGWCC | 2 cut(s) | 115, 322 |
| VspI | ATTAAT | 2 cut(s) | 87, 294 |
| XapI | RAATTY | 1 cut(s) | 415 |