TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 14 - 186 | 1.1e-52 | TIR domain |
| TIR_2 | PF13676 | 17 - 113 | 1.2e-14 | TIR domain |
| NB-ARC | PF00931 | 209 - 364 | 6e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 500 | 1e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 599 - 618 | 3.5e-07 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 658 - 770 | 7.6e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 666 - 751 | 4.8e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1188, 2256 |
| AatII | GACGTC | 1 cut(s) | 51 |
| AccB1I | GGYRCC | 2 cut(s) | 310, 2449 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2465 |
| AccBSI | CCGCTC | 1 cut(s) | 437 |
| AccI | GTMKAC | 2 cut(s) | 602, 1803 |
| AccIII | TCCGGA | 1 cut(s) | 2191 |
| AciI | CCGC | 7 cut(s) | 435, 660, 1241, 1760, 1790, 1856, 2508 |
| AclWI | GGATC | 2 cut(s) | 326, 2290 |
| AcoI | YGGCCR | 1 cut(s) | 28 |
| AcsI | RAATTY | 6 cut(s) | 777, 1251, 1362, 1371, 2249, 2278 |
| AcuI | CTGAAG | 4 cut(s) | 168, 374, 1066, 1278 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AdeI | CACNNNGTG | 2 cut(s) | 252, 2465 |
| AfaI | GTAC | 4 cut(s) | 1109, 1200, 1891, 2307 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 936, 1245, 1246, 1394, 1683, 2465 |
| AflII | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| AjnI | CCWGG | 2 cut(s) | 616, 2384 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1389, 1421 |
| Alw21I | GWGCWC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| Alw26I | GTCTC | 7 cut(s) | 550, 1701, 1829, 2093, 2188, 2386, 2478 |
| Alw44I | GTGCAC | 1 cut(s) | 419 |
| AlwI | GGATC | 2 cut(s) | 326, 2290 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 11, 1792, 2202 |
| Ama87I | CYCGRG | 1 cut(s) | 113 |
| Aor13HI | TCCGGA | 1 cut(s) | 2191 |
| AoxI | GGCC | 1 cut(s) | 28 |
| ApaLI | GTGCAC | 1 cut(s) | 419 |
| ApeKI | GCWGC | 6 cut(s) | 11, 14, 1986, 2028, 2551, 2554 |
| ApoI | RAATTY | 6 cut(s) | 777, 1251, 1362, 1371, 2249, 2278 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 75, 107 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 789, 1626, 2046 |
| AspS9I | GGNCC | 2 cut(s) | 614, 2010 |
| AsuHPI | GGTGA | 3 cut(s) | 80, 506, 1454 |
| AvaI | CYCGRG | 1 cut(s) | 113 |
| AvaII | GGWCC | 2 cut(s) | 614, 2010 |
| AxyI | CCTNAGG | 2 cut(s) | 1099, 1678 |
| BaeGI | GKGCMC | 1 cut(s) | 423 |
| BanI | GGYRCC | 2 cut(s) | 310, 2449 |
| BanII | GRGCYC | 3 cut(s) | 112, 501, 1065 |
| BauI | CACGAG | 1 cut(s) | 474 |
| BbsI | GAAGAC | 4 cut(s) | 43, 78, 396, 437 |
| Bbv12I | GWGCWC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| BbvCI | CCTCAGC | 1 cut(s) | 1733 |
| BbvI | GCAGC | 4 cut(s) | 1998, 2015, 2541, 2563 |
| BccI | CCATC | 6 cut(s) | 31, 177, 343, 1274, 1433, 1921 |
| BceAI | ACGGC | 1 cut(s) | 15 |
| BciT130I | CCWGG | 2 cut(s) | 618, 2386 |
| BclI | TGATCA | 1 cut(s) | 718 |
| BcoDI | GTCTC | 7 cut(s) | 550, 1701, 1829, 2093, 2188, 2386, 2478 |
| BfaI | CTAG | 8 cut(s) | 444, 782, 798, 869, 1286, 1313, 1409, 1577 |
| BfmI | CTRYAG | 2 cut(s) | 825, 2170 |
| BfrI | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| BisI | GCNGC | 8 cut(s) | 12, 15, 1790, 1856, 1987, 2029, 2552, 2555 |
| BlsI | GCNGC | 8 cut(s) | 13, 16, 1791, 1857, 1988, 2030, 2553, 2556 |
| Bme1390I | CCNGG | 2 cut(s) | 618, 2386 |
| Bme18I | GGWCC | 2 cut(s) | 614, 2010 |
| BmeT110I | CYCGRG | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 2 cut(s) | 614, 2010 |
| BmiI | GGNNCC | 5 cut(s) | 312, 847, 1849, 2012, 2451 |
| BmrFI | CCNGG | 2 cut(s) | 618, 2386 |
| BmrI | ACTGGG | 1 cut(s) | 944 |
| BmsI | GCATC | 3 cut(s) | 248, 280, 1446 |
| BmuI | ACTGGG | 1 cut(s) | 944 |
| BpiI | GAAGAC | 4 cut(s) | 43, 78, 396, 437 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2502, 2534 |
| BpmI | CTGGAG | 1 cut(s) | 2368 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1733, 1808 |
| BpuEI | CTTGAG | 4 cut(s) | 187, 1128, 1472, 1640 |
| Bsa29I | ATCGAT | 1 cut(s) | 141 |
| BsaBI | GATNNNNATC | 1 cut(s) | 330 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| BsaI | GGTCTC | 1 cut(s) | 550 |
| BsaJI | CCNNGG | 2 cut(s) | 617, 2385 |
| BsaWI | WCCGGW | 1 cut(s) | 2191 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 936, 1245, 1246, 1394, 1683, 2465 |
| Bse1I | ACTGG | 4 cut(s) | 939, 1500, 1595, 1616 |
| Bse21I | CCTNAGG | 2 cut(s) | 1099, 1678 |
| Bse8I | GATNNNNATC | 1 cut(s) | 330 |
| BseAI | TCCGGA | 1 cut(s) | 2191 |
| BseBI | CCWGG | 2 cut(s) | 618, 2386 |
| BseCI | ATCGAT | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 617, 2385 |
| BseGI | GGATG | 5 cut(s) | 295, 586, 913, 1913, 2539 |
| BseJI | GATNNNNATC | 1 cut(s) | 330 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 936, 1245, 1246, 1394, 1683, 2465 |
| BseMII | CTCAG | 5 cut(s) | 1015, 1113, 1692, 1724, 2559 |
| BseNI | ACTGG | 4 cut(s) | 939, 1500, 1595, 1616 |
| BseRI | GAGGAG | 3 cut(s) | 1666, 2526, 2542 |
| BseSI | GKGCMC | 1 cut(s) | 423 |
| BseXI | GCAGC | 4 cut(s) | 1998, 2015, 2541, 2563 |
| BseYI | CCCAGC | 3 cut(s) | 465, 1982, 2237 |
| BsgI | GTGCAG | 1 cut(s) | 839 |
| BshFI | GGCC | 1 cut(s) | 30 |
| BshNI | GGYRCC | 2 cut(s) | 310, 2449 |
| BshVI | ATCGAT | 1 cut(s) | 141 |
| BsiHKAI | GWGCWC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| BsiHKCI | CYCGRG | 1 cut(s) | 113 |
| BsiSI | CCGG | 1 cut(s) | 2192 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 936, 1245, 1246, 1394, 1683, 2465 |
| BsmAI | GTCTC | 7 cut(s) | 550, 1701, 1829, 2093, 2188, 2386, 2478 |
| BsnI | GGCC | 1 cut(s) | 30 |
| Bso31I | GGTCTC | 1 cut(s) | 550 |
| BsoBI | CYCGRG | 1 cut(s) | 113 |
| Bsp1286I | GDGCHC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| Bsp13I | TCCGGA | 1 cut(s) | 2191 |
| Bsp1407I | TGTACA | 1 cut(s) | 1889 |
| Bsp143I | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| BspACI | CCGC | 7 cut(s) | 435, 660, 1241, 1760, 1790, 1856, 2508 |
| BspANI | GGCC | 1 cut(s) | 30 |
| BspCNI | CTCAG | 5 cut(s) | 1014, 1112, 1691, 1725, 2560 |
| BspDI | ATCGAT | 1 cut(s) | 141 |
| BspEI | TCCGGA | 1 cut(s) | 2191 |
| BspHI | TCATGA | 3 cut(s) | 756, 1057, 1068 |
| BspLI | GGNNCC | 5 cut(s) | 312, 847, 1849, 2012, 2451 |
| BspMAI | CTGCAG | 1 cut(s) | 2174 |
| BspPI | GGATC | 2 cut(s) | 326, 2290 |
| BspQI | GCTCTTC | 1 cut(s) | 1070 |
| BspT107I | GGYRCC | 2 cut(s) | 310, 2449 |
| BspTI | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| BspTNI | GGTCTC | 1 cut(s) | 550 |
| BsrBI | CCGCTC | 1 cut(s) | 437 |
| BsrGI | TGTACA | 1 cut(s) | 1889 |
| BsrI | ACTGG | 4 cut(s) | 939, 1500, 1595, 1616 |
| BssECI | CCNNGG | 2 cut(s) | 617, 2385 |
| BssMI | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| BssNAI | GTATAC | 1 cut(s) | 603 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| BssSI | CACGAG | 1 cut(s) | 474 |
| Bst1107I | GTATAC | 1 cut(s) | 603 |
| Bst2BI | CACGAG | 1 cut(s) | 474 |
| Bst2UI | CCWGG | 2 cut(s) | 618, 2386 |
| Bst4CI | ACNGT | 5 cut(s) | 395, 494, 1561, 1619, 2198 |
| Bst6I | CTCTTC | 6 cut(s) | 408, 531, 758, 1070, 1596, 2476 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstAFI | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstAUI | TGTACA | 1 cut(s) | 1889 |
| BstC8I | GCNNGC | 6 cut(s) | 1128, 1324, 1760, 1814, 1860, 2506 |
| BstF5I | GGATG | 5 cut(s) | 295, 586, 913, 1913, 2539 |
| BstKTI | GATC | 6 cut(s) | 334, 721, 1114, 1271, 2073, 2298 |
| BstMAI | GTCTC | 7 cut(s) | 550, 1701, 1829, 2093, 2188, 2386, 2478 |
| BstMBI | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 1456, 2143, 2505, 2563 |
| BstNI | CCWGG | 2 cut(s) | 618, 2386 |
| BstNSI | RCATGY | 1 cut(s) | 1816 |
| BstSCI | CCNGG | 2 cut(s) | 616, 2384 |
| BstSFI | CTRYAG | 2 cut(s) | 825, 2170 |
| BstSLI | GKGCMC | 1 cut(s) | 423 |
| BstV1I | GCAGC | 4 cut(s) | 1998, 2015, 2541, 2563 |
| BstV2I | GAAGAC | 4 cut(s) | 43, 78, 396, 437 |
| BstX2I | RGATCY | 2 cut(s) | 331, 2295 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1858 |
| BstYI | RGATCY | 2 cut(s) | 331, 2295 |
| BstZ17I | GTATAC | 1 cut(s) | 603 |
| Bsu15I | ATCGAT | 1 cut(s) | 141 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1099, 1678 |
| BsuRI | GGCC | 1 cut(s) | 30 |
| BsuTUI | ATCGAT | 1 cut(s) | 141 |
| BtsCI | GGATG | 5 cut(s) | 295, 586, 913, 1913, 2539 |
| BtsI | GCAGTG | 2 cut(s) | 2320, 2506 |
| BtsIMutI | CAGTG | 5 cut(s) | 1624, 1708, 2203, 2320, 2506 |
| Cac8I | GCNNGC | 6 cut(s) | 1128, 1324, 1760, 1814, 1860, 2506 |
| CaiI | CAGNNNCTG | 3 cut(s) | 11, 1792, 2202 |
| CciI | TCATGA | 3 cut(s) | 756, 1057, 1068 |
| Cfr13I | GGNCC | 2 cut(s) | 614, 2010 |
| ClaI | ATCGAT | 1 cut(s) | 141 |
| CseI | GACGC | 1 cut(s) | 197 |
| Csp6I | GTAC | 4 cut(s) | 1108, 1199, 1890, 2306 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 549, 584 |
| CviQI | GTAC | 4 cut(s) | 1108, 1199, 1890, 2306 |
| DpnI | GATC | 6 cut(s) | 333, 720, 1113, 1270, 2072, 2297 |
| DpnII | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| DraI | TTTAAA | 1 cut(s) | 1947 |
| DraIII | CACNNNGTG | 2 cut(s) | 252, 2465 |
| EaeI | YGGCCR | 1 cut(s) | 28 |
| Eam1104I | CTCTTC | 6 cut(s) | 408, 531, 758, 1070, 1596, 2476 |
| EarI | CTCTTC | 6 cut(s) | 408, 531, 758, 1070, 1596, 2476 |
| Ecl136II | GAGCTC | 3 cut(s) | 110, 499, 1063 |
| Eco24I | GRGCYC | 3 cut(s) | 112, 501, 1065 |
| Eco31I | GGTCTC | 1 cut(s) | 550 |
| Eco47I | GGWCC | 2 cut(s) | 614, 2010 |
| Eco53kI | GAGCTC | 3 cut(s) | 110, 499, 1063 |
| Eco57I | CTGAAG | 4 cut(s) | 168, 374, 1066, 1278 |
| Eco81I | CCTNAGG | 2 cut(s) | 1099, 1678 |
| Eco88I | CYCGRG | 1 cut(s) | 113 |
| EcoICRI | GAGCTC | 3 cut(s) | 110, 499, 1063 |
| EcoO109I | RGGNCCY | 2 cut(s) | 614, 2010 |
| EcoRI | GAATTC | 1 cut(s) | 2278 |
| EcoRII | CCWGG | 2 cut(s) | 616, 2384 |
| EcoT22I | ATGCAT | 2 cut(s) | 241, 1461 |
| EcoT38I | GRGCYC | 3 cut(s) | 112, 501, 1065 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 510, 542, 1064, 1096, 1614, 1646 |
| FauI | CCCGC | 2 cut(s) | 1248, 1767 |
| FauNDI | CATATG | 1 cut(s) | 1351 |
| FbaI | TGATCA | 1 cut(s) | 718 |
| FblI | GTMKAC | 2 cut(s) | 602, 1803 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 15, 1790, 1856, 1987, 2029, 2552, 2555 |
| FokI | GGATG | 5 cut(s) | 302, 593, 920, 1900, 2546 |
| FriOI | GRGCYC | 3 cut(s) | 112, 501, 1065 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 15, 1790, 1856, 1987, 2029, 2552, 2555 |
| FspBI | CTAG | 8 cut(s) | 444, 782, 798, 869, 1286, 1313, 1409, 1577 |
| GluI | GCNGC | 8 cut(s) | 12, 15, 1790, 1856, 1987, 2029, 2552, 2555 |
| GsaI | CCCAGC | 3 cut(s) | 469, 1986, 2241 |
| GsuI | CTGGAG | 1 cut(s) | 2368 |
| HaeIII | GGCC | 1 cut(s) | 30 |
| HapII | CCGG | 1 cut(s) | 2192 |
| HgaI | GACGC | 1 cut(s) | 197 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| HincII | GTYRAC | 2 cut(s) | 1536, 1804 |
| HindII | GTYRAC | 2 cut(s) | 1536, 1804 |
| HindIII | AAGCTT | 3 cut(s) | 372, 1448, 1623 |
| HpaII | CCGG | 1 cut(s) | 2192 |
| HphI | GGTGA | 3 cut(s) | 80, 506, 1454 |
| Hpy166II | GTNNAC | 7 cut(s) | 421, 557, 603, 1199, 1536, 1691, 1804 |
| Hpy8I | GTNNAC | 7 cut(s) | 421, 557, 603, 1199, 1536, 1691, 1804 |
| Hpy99I | CGWCG | 1 cut(s) | 494 |
| HpyAV | CCTTC | 7 cut(s) | 143, 349, 1090, 1838, 2198, 2228, 2486 |
| HpyCH4III | ACNGT | 5 cut(s) | 395, 494, 1561, 1619, 2198 |
| HpyCH4IV | ACGT | 3 cut(s) | 48, 342, 1698 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 1456, 2143, 2505, 2563 |
| HpySE526I | ACGT | 3 cut(s) | 48, 342, 1698 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| Kpn2I | TCCGGA | 1 cut(s) | 2191 |
| Ksp22I | TGATCA | 1 cut(s) | 718 |
| Kzo9I | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| LguI | GCTCTTC | 1 cut(s) | 1070 |
| LmnI | GCTCC | 2 cut(s) | 940, 1175 |
| Lsp1109I | GCAGC | 4 cut(s) | 1998, 2015, 2541, 2563 |
| LweI | GCATC | 3 cut(s) | 248, 280, 1446 |
| MaeI | CTAG | 8 cut(s) | 444, 782, 798, 869, 1286, 1313, 1409, 1577 |
| MaeII | ACGT | 3 cut(s) | 48, 342, 1698 |
| MaeIII | GTNAC | 2 cut(s) | 1426, 1670 |
| MalI | GATC | 6 cut(s) | 333, 720, 1113, 1270, 2072, 2297 |
| MbiI | CCGCTC | 1 cut(s) | 437 |
| MboI | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| MfeI | CAATTG | 1 cut(s) | 2127 |
| MflI | RGATCY | 2 cut(s) | 331, 2295 |
| MhlI | GDGCHC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| MlyI | GAGTC | 3 cut(s) | 194, 2379, 2388 |
| MmeI | TCCRAC | 3 cut(s) | 17, 73, 1463 |
| Mph1103I | ATGCAT | 2 cut(s) | 241, 1461 |
| MroI | TCCGGA | 1 cut(s) | 2191 |
| MroXI | GAANNNNTTC | 3 cut(s) | 789, 1626, 2046 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1994 |
| MspA1I | CMGCKG | 5 cut(s) | 426, 1732, 1792, 1858, 2554 |
| MspCI | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| MspI | CCGG | 1 cut(s) | 2192 |
| MspR9I | CCNGG | 2 cut(s) | 618, 2386 |
| MunI | CAATTG | 1 cut(s) | 2127 |
| MvaI | CCWGG | 2 cut(s) | 618, 2386 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 1456, 2143, 2505, 2563 |
| NdeI | CATATG | 1 cut(s) | 1351 |
| NdeII | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| NlaIV | GGNNCC | 5 cut(s) | 312, 847, 1849, 2012, 2451 |
| NmeAIII | GCCGAG | 1 cut(s) | 2499 |
| NsiI | ATGCAT | 2 cut(s) | 241, 1461 |
| NspI | RCATGY | 1 cut(s) | 1816 |
| PaeI | GCATGC | 1 cut(s) | 1816 |
| PaeR7I | CTCGAG | 1 cut(s) | 113 |
| PagI | TCATGA | 3 cut(s) | 756, 1057, 1068 |
| PciSI | GCTCTTC | 1 cut(s) | 1070 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 195 |
| PdmI | GAANNNNTTC | 3 cut(s) | 789, 1626, 2046 |
| PfeI | GAWTC | 7 cut(s) | 143, 470, 538, 801, 969, 1795, 1975 |
| PflFI | GACNNNGTC | 1 cut(s) | 2198 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2465 |
| PkrI | GCNGC | 8 cut(s) | 13, 16, 1791, 1857, 1988, 2030, 2553, 2556 |
| PleI | GAGTC | 3 cut(s) | 194, 2378, 2387 |
| PpsI | GAGTC | 3 cut(s) | 194, 2378, 2387 |
| PpuMI | RGGWCCY | 2 cut(s) | 614, 2010 |
| PsiI | TTATAA | 2 cut(s) | 1188, 2256 |
| Psp124BI | GAGCTC | 3 cut(s) | 112, 501, 1065 |
| Psp5II | RGGWCCY | 2 cut(s) | 614, 2010 |
| Psp6I | CCWGG | 2 cut(s) | 616, 2384 |
| PspFI | CCCAGC | 3 cut(s) | 465, 1982, 2237 |
| PspGI | CCWGG | 2 cut(s) | 616, 2384 |
| PspN4I | GGNNCC | 5 cut(s) | 312, 847, 1849, 2012, 2451 |
| PspPI | GGNCC | 2 cut(s) | 614, 2010 |
| PspPPI | RGGWCCY | 2 cut(s) | 614, 2010 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 615, 647 |
| PstI | CTGCAG | 1 cut(s) | 2174 |
| PstNI | CAGNNNCTG | 3 cut(s) | 11, 1792, 2202 |
| PsuI | RGATCY | 2 cut(s) | 331, 2295 |
| PsyI | GACNNNGTC | 1 cut(s) | 2198 |
| PvuII | CAGCTG | 3 cut(s) | 426, 1732, 2554 |
| RsaI | GTAC | 4 cut(s) | 1109, 1200, 1891, 2307 |
| RsaNI | GTAC | 4 cut(s) | 1108, 1199, 1890, 2306 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1994 |
| SacI | GAGCTC | 3 cut(s) | 112, 501, 1065 |
| SalI | GTCGAC | 1 cut(s) | 1802 |
| SapI | GCTCTTC | 1 cut(s) | 1070 |
| SatI | GCNGC | 8 cut(s) | 12, 15, 1790, 1856, 1987, 2029, 2552, 2555 |
| Sau3AI | GATC | 6 cut(s) | 331, 718, 1111, 1268, 2070, 2295 |
| Sau96I | GGNCC | 2 cut(s) | 614, 2010 |
| SchI | GAGTC | 3 cut(s) | 194, 2379, 2388 |
| ScrFI | CCNGG | 2 cut(s) | 618, 2386 |
| SduI | GDGCHC | 6 cut(s) | 112, 423, 501, 1065, 2246, 2520 |
| SfaNI | GCATC | 3 cut(s) | 248, 280, 1446 |
| SfcI | CTRYAG | 2 cut(s) | 825, 2170 |
| Sfr274I | CTCGAG | 1 cut(s) | 113 |
| SinI | GGWCC | 2 cut(s) | 614, 2010 |
| SlaI | CTCGAG | 1 cut(s) | 113 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1994 |
| SmlI | CTYRAG | 9 cut(s) | 113, 202, 530, 1039, 1143, 1451, 1655, 1970, 2558 |
| SmoI | CTYRAG | 9 cut(s) | 113, 202, 530, 1039, 1143, 1451, 1655, 1970, 2558 |
| SphI | GCATGC | 1 cut(s) | 1816 |
| SsiI | CCGC | 7 cut(s) | 435, 660, 1241, 1760, 1790, 1856, 2508 |
| SspI | AATATT | 1 cut(s) | 1393 |
| SspMI | CTAG | 8 cut(s) | 444, 782, 798, 869, 1286, 1313, 1409, 1577 |
| SstI | GAGCTC | 3 cut(s) | 112, 501, 1065 |
| StyD4I | CCNGG | 2 cut(s) | 616, 2384 |
| TaaI | ACNGT | 5 cut(s) | 395, 494, 1561, 1619, 2198 |
| TaiI | ACGT | 3 cut(s) | 51, 345, 1701 |
| TatI | WGTACW | 2 cut(s) | 1889, 2305 |
| TauI | GCSGC | 2 cut(s) | 1792, 1858 |
| TfiI | GAWTC | 7 cut(s) | 143, 470, 538, 801, 969, 1795, 1975 |
| TscAI | CASTG | 5 cut(s) | 1624, 1708, 2203, 2320, 2506 |
| TseI | GCWGC | 6 cut(s) | 11, 14, 1986, 2028, 2551, 2554 |
| TspGWI | ACGGA | 1 cut(s) | 1568 |
| TspRI | CASTG | 5 cut(s) | 1624, 1708, 2203, 2320, 2506 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2198 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2465 |
| Vha464I | CTTAAG | 3 cut(s) | 530, 1039, 1970 |
| VneI | GTGCAC | 1 cut(s) | 419 |
| VpaK11BI | GGWCC | 2 cut(s) | 614, 2010 |
| XapI | RAATTY | 6 cut(s) | 777, 1251, 1362, 1371, 2249, 2278 |
| XbaI | TCTAGA | 3 cut(s) | 781, 797, 1312 |
| XceI | RCATGY | 1 cut(s) | 1816 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 856 |
| XhoI | CTCGAG | 1 cut(s) | 113 |
| XmiI | GTMKAC | 2 cut(s) | 602, 1803 |
| XmnI | GAANNNNTTC | 3 cut(s) | 789, 1626, 2046 |
| XspI | CTAG | 8 cut(s) | 444, 782, 798, 869, 1286, 1313, 1409, 1577 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| Zsp2I | ATGCAT | 2 cut(s) | 241, 1461 |