pycom07g23450

Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24364683 .. 24365693
1011 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23450.2

Sequence Viewer

Length: 810 bp
ATGATTATTAAACTGCTCCTTAAGAAACAAGCTACAAAAGCAGTTGAAAGCATAATCCTGTATTTGTCGTGCTCATATGGGGTATGCCTAAATGCTGAAGCTTTTGTTAGTATGACTCAACTAAGACTTCTCAAGATCAGTCATAAGGATTCCATTTTTAAACATGATTACTGCAAACAACACCTGATTGAGAACTTCAAGTTACTTGAGTTGAGGCATCTCTCCTGGCTTAATTGCCCTCTTAAGTCTTTGGCATCCAACTTTCAATTCAAAAATCTTGTTGACCTTGATATGCAATATAGTCTCATTGACCGACTTTGGGAAGGAACCCAGATGCTGGAAAAGGTGAAATTCATCAATTTAAGTTATTGCGAATACCTTAAGGAGACCCCAGACTTCACAAAGGTACCAAATCTTGAGAGGCTAATCCTTCAAAGTTGTATAAGTTTAGTTGAGGTTCACCCATCTATTTCGACTCTTACAAACCTTGTTTTATTGAATTTGAATGGGTGCAAAAAACTTAAGATTCTAGCCAGCAGCATTCGTATGCGCTCTCTTAAAACCCTTGATCTTTATGGTTGCTCAAACCTTGACAAGTTTCCTGAGATTTTAGAAGTTATGAAGGAAGTATTAGAACTTAATTTATCTGGTTCAAAAATTAAAGAATTGCCCTCATCAATTAATAATCTCACGGGGTTGAAGTATTTGTACCTAAAAGATTGTAAGGAACTTAAGAGTCTTCCAAGTAGCATTCGTATGAAATATGTTTCCAGAGATTTCAGAAGTTATGGAGGAACTATCATGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

270

Amino Acids

30.96

Weight (kDa)

9.14

Isoelectric Point (pI)

26.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 406
AccB1I GGYRCC 1 cut(s) 406
AccB7I CCANNNNNTGG 1 cut(s) 337
AcsI RAATTY 2 cut(s) 350, 499
AcuI CTGAAG 1 cut(s) 117
AfaI GTAC 2 cut(s) 408, 710
AfiI CCNNNNNNNGG 2 cut(s) 319, 337
AflII CTTAAG 5 cut(s) 20, 242, 380, 521, 731
AgsI TTSAA 9 cut(s) 47, 199, 266, 271, 434, 499, 505, 654, 700
AjnI CCWGG 1 cut(s) 224
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 2 cut(s) 32, 101
AluI AGCT 2 cut(s) 32, 101
Alw21I GWGCWC 1 cut(s) 74
Alw26I GTCTC 2 cut(s) 308, 380
AlwNI CAGNNNCTG 1 cut(s) 337
ApeKI GCWGC 1 cut(s) 537
ApoI RAATTY 2 cut(s) 350, 499
AseI ATTAAT 1 cut(s) 681
Asp718I GGTACC 1 cut(s) 406
AspLEI GCGC 1 cut(s) 552
AsuHPI GGTGA 2 cut(s) 358, 452
BaeI ACNNNNGTAYC 2 cut(s) 390, 423
BanI GGYRCC 1 cut(s) 406
BarI GAAGNNNNNNTAC 2 cut(s) 692, 724
BbsI GAAGAC 1 cut(s) 731
Bbv12I GWGCWC 1 cut(s) 74
BbvI GCAGC 1 cut(s) 549
BccI CCATC 1 cut(s) 472
BciT130I CCWGG 1 cut(s) 226
BcoDI GTCTC 2 cut(s) 308, 380
BfaI CTAG 1 cut(s) 530
BfrI CTTAAG 5 cut(s) 20, 242, 380, 521, 731
BisI GCNGC 1 cut(s) 538
BlsI GCNGC 1 cut(s) 539
Bme1390I CCNGG 1 cut(s) 226
BmiI GGNNCC 2 cut(s) 328, 408
BmrFI CCNGG 1 cut(s) 226
BmsI GCATC 3 cut(s) 226, 263, 324
BpiI GAAGAC 1 cut(s) 731
BpuEI CTTGAG 3 cut(s) 116, 227, 437
BsaI GGTCTC 1 cut(s) 380
Bsc4I CCNNNNNNNGG 2 cut(s) 319, 337
BseBI CCWGG 1 cut(s) 226
BseGI GGATG 1 cut(s) 254
BseLI CCNNNNNNNGG 2 cut(s) 319, 337
BseMII CTCAG 1 cut(s) 594
BseXI GCAGC 1 cut(s) 549
BshNI GGYRCC 1 cut(s) 406
BsiHKAI GWGCWC 1 cut(s) 74
BslI CCNNNNNNNGG 2 cut(s) 319, 337
BsmAI GTCTC 2 cut(s) 308, 380
BsmI GAATGC 2 cut(s) 540, 750
Bso31I GGTCTC 1 cut(s) 380
Bsp1286I GDGCHC 1 cut(s) 74
Bsp143I GATC 2 cut(s) 135, 568
BspCNI CTCAG 1 cut(s) 595
BspLI GGNNCC 2 cut(s) 328, 408
BspT107I GGYRCC 1 cut(s) 406
BspTI CTTAAG 5 cut(s) 20, 242, 380, 521, 731
BspTNI GGTCTC 1 cut(s) 380
BssMI GATC 2 cut(s) 135, 568
Bst2UI CCWGG 1 cut(s) 226
BstAFI CTTAAG 5 cut(s) 20, 242, 380, 521, 731
BstC8I GCNNGC 1 cut(s) 535
BstDEI CTNAG 3 cut(s) 122, 603, 807
BstF5I GGATG 1 cut(s) 254
BstHHI GCGC 1 cut(s) 552
BstKTI GATC 2 cut(s) 138, 571
BstMAI GTCTC 2 cut(s) 308, 380
BstMBI GATC 2 cut(s) 135, 568
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstNI CCWGG 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 224
BstV1I GCAGC 1 cut(s) 549
BstV2I GAAGAC 1 cut(s) 731
BtsCI GGATG 1 cut(s) 254
Cac8I GCNNGC 1 cut(s) 535
CaiI CAGNNNCTG 1 cut(s) 337
CfoI GCGC 1 cut(s) 552
Csp6I GTAC 2 cut(s) 407, 709
CviAII CATG 2 cut(s) 164, 802
CviJI RGCY 6 cut(s) 32, 101, 229, 424, 533, 806
CviKI_1 RGCY 6 cut(s) 32, 101, 229, 424, 533, 806
CviQI GTAC 2 cut(s) 407, 709
DdeI CTNAG 3 cut(s) 122, 603, 807
DpnI GATC 2 cut(s) 137, 570
DpnII GATC 2 cut(s) 135, 568
DraI TTTAAA 1 cut(s) 160
Eco31I GGTCTC 1 cut(s) 380
Eco57I CTGAAG 1 cut(s) 117
EcoRII CCWGG 1 cut(s) 224
FaeI CATG 2 cut(s) 167, 805
FatI CATG 2 cut(s) 163, 801
FauNDI CATATG 1 cut(s) 76
Fnu4HI GCNGC 1 cut(s) 538
FokI GGATG 1 cut(s) 241
Fsp4HI GCNGC 1 cut(s) 538
FspBI CTAG 1 cut(s) 530
GlaI GCGC 1 cut(s) 551
GluI GCNGC 1 cut(s) 538
HhaI GCGC 1 cut(s) 552
Hin1II CATG 2 cut(s) 167, 805
Hin6I GCGC 1 cut(s) 550
HinP1I GCGC 1 cut(s) 550
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 1 cut(s) 99
HinfI GANTC 5 cut(s) 115, 149, 475, 526, 736
HphI GGTGA 2 cut(s) 358, 452
Hpy166II GTNNAC 2 cut(s) 283, 460
Hpy188I TCNGA 1 cut(s) 782
Hpy188III TCNNGA 4 cut(s) 133, 416, 602, 771
Hpy8I GTNNAC 2 cut(s) 283, 460
HpyAV CCTTC 3 cut(s) 317, 440, 616
HpyCH4V TGCA 3 cut(s) 174, 295, 513
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 3 cut(s) 122, 603, 807
Hsp92II CATG 2 cut(s) 167, 805
HspAI GCGC 1 cut(s) 550
KpnI GGTACC 1 cut(s) 410
Kzo9I GATC 2 cut(s) 135, 568
LmnI GCTCC 1 cut(s) 21
Lsp1109I GCAGC 1 cut(s) 549
LweI GCATC 3 cut(s) 226, 263, 324
MaeI CTAG 1 cut(s) 530
MaeIII GTNAC 1 cut(s) 201
MalI GATC 2 cut(s) 137, 570
MboI GATC 2 cut(s) 135, 568
MboII GAAGA 1 cut(s) 731
MhlI GDGCHC 1 cut(s) 74
MluCI AATT 9 cut(s) 232, 266, 350, 358, 499, 640, 657, 665, 678
MlyI GAGTC 3 cut(s) 109, 469, 745
MmeI TCCRAC 1 cut(s) 282
MnlI CCTC 6 cut(s) 207, 249, 414, 448, 682, 785
MslI CAYNNNNRTG 2 cut(s) 545, 755
MspCI CTTAAG 5 cut(s) 20, 242, 380, 521, 731
MspR9I CCNGG 1 cut(s) 226
Mva1269I GAATGC 2 cut(s) 540, 750
MvaI CCWGG 1 cut(s) 226
MwoI GCNNNNNNNGC 1 cut(s) 38
NdeI CATATG 1 cut(s) 76
NdeII GATC 2 cut(s) 135, 568
NlaIII CATG 2 cut(s) 167, 805
NlaIV GGNNCC 2 cut(s) 328, 408
PctI GAATGC 2 cut(s) 540, 750
PfeI GAWTC 2 cut(s) 149, 526
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 1 cut(s) 539
PleI GAGTC 3 cut(s) 109, 469, 744
PpsI GAGTC 3 cut(s) 109, 469, 744
PshBI ATTAAT 1 cut(s) 681
Psp6I CCWGG 1 cut(s) 224
PspGI CCWGG 1 cut(s) 224
PspN4I GGNNCC 2 cut(s) 328, 408
PstNI CAGNNNCTG 1 cut(s) 337
RsaI GTAC 2 cut(s) 408, 710
RsaNI GTAC 2 cut(s) 407, 709
RseI CAYNNNNRTG 2 cut(s) 545, 755
SatI GCNGC 1 cut(s) 538
Sau3AI GATC 2 cut(s) 135, 568
SchI GAGTC 3 cut(s) 109, 469, 745
ScrFI CCNGG 1 cut(s) 226
SduI GDGCHC 1 cut(s) 74
SfaNI GCATC 3 cut(s) 226, 263, 324
SmiMI CAYNNNNRTG 2 cut(s) 545, 755
SmlI CTYRAG 8 cut(s) 20, 131, 206, 242, 380, 416, 521, 731
SmoI CTYRAG 8 cut(s) 20, 131, 206, 242, 380, 416, 521, 731
Sse9I AATT 9 cut(s) 232, 266, 350, 358, 499, 640, 657, 665, 678
SspMI CTAG 1 cut(s) 530
StyD4I CCNGG 1 cut(s) 224
TaqI TCGA 1 cut(s) 473
TaqII GACCGA 1 cut(s) 327
TasI AATT 9 cut(s) 232, 266, 350, 358, 499, 640, 657, 665, 678
TfiI GAWTC 2 cut(s) 149, 526
TseI GCWGC 1 cut(s) 537
TspDTI ATGAA 3 cut(s) 343, 635, 773
Van91I CCANNNNNTGG 1 cut(s) 337
Vha464I CTTAAG 5 cut(s) 20, 242, 380, 521, 731
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 2 cut(s) 350, 499
XspI CTAG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.