Rroxscaffold_4G00305920

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
26679351 .. 26686221
6871 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00305920.1

Sequence Viewer

Length: 960 bp
ATGGGTGGCATCGGCAAGTCAACCATAGCTAGAGCTGTTTTTGACAAAATTGCTCATCAATATGAACACAGCTGCTTTCTTGAGAATGTGAAGGAGGGCTTCATCACAAAAAATGGTGCAGTACAAATGGTTGAAAAACTTCTATCCAAAATTCTGAAGGTAAAGGATCGAAGCACTTTGGATGGAGGGCTGAATATGATTAGGAAAAGACTAGGTAAGAAAAAAATTCTTCTTGTTCTTGATGATGTGGACAATCTGCACCAAATTGAAACCTTGATTGGAGAGAGACCTACATTTGGTGGTGGGAGCAGAATTATTATAACAACTAGAGATAAGGCGTTACTGGGTACATGTTTCATATATGAGCCCAAGTTGTTGACTGATGAAGAAGCTCTTGAACTCTTTAGCCGGTATGCTTTCAGAAGAAACAAATATTCAGAGATTTATGATGCTATCTCAAGGCGTGCCATAGAATATGCGCATGGTCTTCCTTTAGCACTCAAAGTCCTGGGAGCTTTGCTTGTTAACAGAACTACTGTACAGGAGTGGGAATATGAGTTGGAGAAGATAAAGAAAGCCCCAATCACGTCTCTTGATAATGATATTAGATGTGTGCTTTGGGCAAGCTATGAAGGATTGGATATATATCAGAAGAAAATATTTCTAGATATTGCATGTTTCTTTAAGAGAAATGACAAAGATTTTGTAACAAAGTTTCATAAAAGTTGTGGCTTTTTCCCCGAGAATGGACTAACCGTTTTGGTAGAAAGATCTCTTGTGACTATCTCATGGATTGGTACACTACAGATGCATGATTTGATACAGGAATTGGGTAGGGACATCGTCTACCAACAATCTACTGAAGATCTGGGAATGCGTAGTAGATTATGGGATTATAAAGGTGTTCTCCAAGTATTAGCTCAAAATACGGTAGTTCGTGGAGTTATTCAAGAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

319

Amino Acids

36.5

Weight (kDa)

8.78

Isoelectric Point (pI)

37.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 143 6.6e-18 NB-ARC domain
WHD_ROQ1 PF23282 217 - 286 2.1e-19 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 320, 897
Acc16I TGCGCA 1 cut(s) 480
AccI GTMKAC 1 cut(s) 846
AclWI GGATC 1 cut(s) 174
AcsI RAATTY 2 cut(s) 150, 225
AcuI CTGAAG 2 cut(s) 176, 882
AfaI GTAC 4 cut(s) 123, 349, 540, 799
AfiI CCNNNNNNNGG 2 cut(s) 296, 746
AflIII ACRYGT 1 cut(s) 350
AgsI TTSAA 4 cut(s) 134, 269, 398, 950
AjiI CACGTC 1 cut(s) 588
AjnI CCWGG 1 cut(s) 507
AjuI GAANNNNNNNTTGG 2 cut(s) 261, 293
AluBI AGCT 7 cut(s) 29, 35, 72, 392, 515, 627, 920
AluI AGCT 7 cut(s) 29, 35, 72, 392, 515, 627, 920
Alw26I GTCTC 2 cut(s) 280, 594
AlwI GGATC 1 cut(s) 174
Ama87I CYCGRG 1 cut(s) 740
ApeKI GCWGC 1 cut(s) 72
ApoI RAATTY 2 cut(s) 150, 225
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
Asp700I GAANNNNTTC 1 cut(s) 138
AspLEI GCGC 1 cut(s) 481
AvaI CYCGRG 1 cut(s) 740
BanII GRGCYC 1 cut(s) 369
BbsI GAAGAC 1 cut(s) 479
BbvI GCAGC 1 cut(s) 59
BccI CCATC 1 cut(s) 176
BciT130I CCWGG 1 cut(s) 509
BcoDI GTCTC 2 cut(s) 280, 594
BfaI CTAG 5 cut(s) 30, 212, 327, 665, 958
BfmI CTRYAG 1 cut(s) 803
BglII AGATCT 2 cut(s) 770, 865
BisI GCNGC 1 cut(s) 73
BlsI GCNGC 1 cut(s) 74
Bme1390I CCNGG 1 cut(s) 509
BmeT110I CYCGRG 1 cut(s) 740
BmgBI CACGTC 1 cut(s) 588
BmrFI CCNGG 1 cut(s) 509
BmrI ACTGGG 1 cut(s) 353
BmsI GCATC 3 cut(s) 18, 439, 798
BmuI ACTGGG 1 cut(s) 353
BpiI GAAGAC 1 cut(s) 479
BpuEI CTTGAG 2 cut(s) 101, 442
BsaBI GATNNNNATC 1 cut(s) 645
BsaI GGTCTC 1 cut(s) 280
BsaJI CCNNGG 1 cut(s) 508
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 746
Bse118I RCCGGY 1 cut(s) 408
Bse1I ACTGG 1 cut(s) 348
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 1 cut(s) 509
BseDI CCNNGG 1 cut(s) 508
BseGI GGATG 1 cut(s) 187
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 2 cut(s) 296, 746
BseNI ACTGG 1 cut(s) 348
BseXI GCAGC 1 cut(s) 59
BsgI GTGCAG 2 cut(s) 138, 242
BsiHKCI CYCGRG 1 cut(s) 740
BsiSI CCGG 1 cut(s) 409
BslFI GGGAC 1 cut(s) 851
BslI CCNNNNNNNGG 2 cut(s) 296, 746
BsmAI GTCTC 2 cut(s) 280, 594
BsmBI CGTCTC 1 cut(s) 594
BsmFI GGGAC 1 cut(s) 851
BsmI GAATGC 1 cut(s) 879
Bso31I GGTCTC 1 cut(s) 280
BsoBI CYCGRG 1 cut(s) 740
Bsp1286I GDGCHC 1 cut(s) 369
Bsp1407I TGTACA 1 cut(s) 538
Bsp143I GATC 3 cut(s) 166, 770, 865
BspPI GGATC 1 cut(s) 174
BspTNI GGTCTC 1 cut(s) 280
BsrFI RCCGGY 1 cut(s) 408
BsrGI TGTACA 1 cut(s) 538
BsrI ACTGG 1 cut(s) 348
BssAI RCCGGY 1 cut(s) 408
BssECI CCNNGG 1 cut(s) 508
BssMI GATC 3 cut(s) 166, 770, 865
Bst2UI CCWGG 1 cut(s) 509
Bst4CI ACNGT 3 cut(s) 538, 757, 931
BstAUI TGTACA 1 cut(s) 538
BstC8I GCNNGC 2 cut(s) 465, 625
BstF5I GGATG 1 cut(s) 187
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 3 cut(s) 169, 773, 868
BstMAI GTCTC 2 cut(s) 280, 594
BstMBI GATC 3 cut(s) 166, 770, 865
BstNI CCWGG 1 cut(s) 509
BstNSI RCATGY 2 cut(s) 354, 678
BstSCI CCNGG 1 cut(s) 507
BstSFI CTRYAG 1 cut(s) 803
BstV1I GCAGC 1 cut(s) 59
BstV2I GAAGAC 1 cut(s) 479
BstX2I RGATCY 2 cut(s) 770, 865
BstYI RGATCY 2 cut(s) 770, 865
BtrI CACGTC 1 cut(s) 588
BtsCI GGATG 1 cut(s) 187
Cac8I GCNNGC 2 cut(s) 465, 625
CfoI GCGC 1 cut(s) 481
Cfr10I RCCGGY 1 cut(s) 408
Csp6I GTAC 4 cut(s) 122, 348, 539, 798
CviAII CATG 5 cut(s) 351, 482, 675, 789, 812
CviQI GTAC 4 cut(s) 122, 348, 539, 798
DpnI GATC 3 cut(s) 168, 772, 867
DpnII GATC 3 cut(s) 166, 770, 865
Eco24I GRGCYC 1 cut(s) 369
Eco31I GGTCTC 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 176, 882
Eco88I CYCGRG 1 cut(s) 740
EcoRII CCWGG 1 cut(s) 507
EcoT22I ATGCAT 1 cut(s) 813
EcoT38I GRGCYC 1 cut(s) 369
Esp3I CGTCTC 1 cut(s) 594
FaeI CATG 5 cut(s) 354, 485, 678, 792, 815
FalI AAGNNNNNCTT 4 cut(s) 83, 115, 378, 410
FaqI GGGAC 1 cut(s) 851
FatI CATG 5 cut(s) 350, 481, 674, 788, 811
FblI GTMKAC 1 cut(s) 846
Fnu4HI GCNGC 1 cut(s) 73
FokI GGATG 1 cut(s) 194
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 1 cut(s) 73
FspAI RTGCGCAY 1 cut(s) 480
FspBI CTAG 5 cut(s) 30, 212, 327, 665, 958
FspI TGCGCA 1 cut(s) 480
GlaI GCGC 1 cut(s) 480
GluI GCNGC 1 cut(s) 73
HapII CCGG 1 cut(s) 409
HhaI GCGC 1 cut(s) 481
Hin1II CATG 5 cut(s) 354, 485, 678, 792, 815
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HincII GTYRAC 3 cut(s) 21, 378, 526
HindII GTYRAC 3 cut(s) 21, 378, 526
HpaI GTTAAC 1 cut(s) 526
HpaII CCGG 1 cut(s) 409
Hpy166II GTNNAC 6 cut(s) 21, 250, 378, 526, 800, 847
Hpy188I TCNGA 4 cut(s) 156, 422, 439, 651
Hpy188III TCNNGA 6 cut(s) 80, 239, 395, 593, 665, 950
Hpy8I GTNNAC 6 cut(s) 21, 250, 378, 526, 800, 847
HpyAV CCTTC 3 cut(s) 85, 151, 626
HpyCH4III ACNGT 3 cut(s) 538, 757, 931
HpyCH4IV ACGT 1 cut(s) 587
HpyCH4V TGCA 4 cut(s) 119, 259, 674, 811
HpySE526I ACGT 1 cut(s) 587
Hsp92II CATG 5 cut(s) 354, 485, 678, 792, 815
HspAI GCGC 1 cut(s) 479
KspAI GTTAAC 1 cut(s) 526
Kzo9I GATC 3 cut(s) 166, 770, 865
LmnI GCTCC 2 cut(s) 306, 512
LpnPI CCDG 7 cut(s) 329, 422, 494, 521, 527, 809, 854
Lsp1109I GCAGC 1 cut(s) 59
LweI GCATC 3 cut(s) 18, 439, 798
MaeI CTAG 5 cut(s) 30, 212, 327, 665, 958
MaeII ACGT 1 cut(s) 587
MaeIII GTNAC 3 cut(s) 339, 706, 778
MalI GATC 3 cut(s) 168, 772, 867
MboI GATC 3 cut(s) 166, 770, 865
MboII GAAGA 7 cut(s) 221, 398, 435, 479, 577, 664, 875
MflI RGATCY 2 cut(s) 770, 865
MhlI GDGCHC 1 cut(s) 369
MluCI AATT 6 cut(s) 48, 150, 225, 264, 312, 827
MmeI TCCRAC 1 cut(s) 540
MnlI CCTC 2 cut(s) 88, 179
Mph1103I ATGCAT 1 cut(s) 813
MroXI GAANNNNTTC 1 cut(s) 138
MseI TTAA 2 cut(s) 525, 684
MslI CAYNNNNRTG 1 cut(s) 60
MspA1I CMGCKG 1 cut(s) 72
MspI CCGG 1 cut(s) 409
MspR9I CCNGG 1 cut(s) 509
Mva1269I GAATGC 1 cut(s) 879
MvaI CCWGG 1 cut(s) 509
NdeII GATC 3 cut(s) 166, 770, 865
NlaIII CATG 5 cut(s) 354, 485, 678, 792, 815
NmuCI GTSAC 1 cut(s) 778
NsbI TGCGCA 1 cut(s) 480
NsiI ATGCAT 1 cut(s) 813
NspI RCATGY 2 cut(s) 354, 678
PciI ACATGT 1 cut(s) 350
PctI GAATGC 1 cut(s) 879
PdmI GAANNNNTTC 1 cut(s) 138
PflFI GACNNNGTC 1 cut(s) 842
PkrI GCNGC 1 cut(s) 74
PscI ACATGT 1 cut(s) 350
PsiI TTATAA 2 cut(s) 320, 897
Psp6I CCWGG 1 cut(s) 507
PspGI CCWGG 1 cut(s) 507
PsuI RGATCY 2 cut(s) 770, 865
PsyI GACNNNGTC 1 cut(s) 842
PvuII CAGCTG 1 cut(s) 72
RsaI GTAC 4 cut(s) 123, 349, 540, 799
RsaNI GTAC 4 cut(s) 122, 348, 539, 798
RseI CAYNNNNRTG 1 cut(s) 60
SaqAI TTAA 2 cut(s) 525, 684
SatI GCNGC 1 cut(s) 73
Sau3AI GATC 3 cut(s) 166, 770, 865
ScrFI CCNGG 1 cut(s) 509
SduI GDGCHC 1 cut(s) 369
SfaNI GCATC 3 cut(s) 18, 439, 798
SfcI CTRYAG 1 cut(s) 803
SmiMI CAYNNNNRTG 1 cut(s) 60
SmlI CTYRAG 2 cut(s) 80, 457
SmoI CTYRAG 2 cut(s) 80, 457
Sse9I AATT 6 cut(s) 48, 150, 225, 264, 312, 827
SspI AATATT 2 cut(s) 434, 660
SspMI CTAG 5 cut(s) 30, 212, 327, 665, 958
StyD4I CCNGG 1 cut(s) 507
TaaI ACNGT 3 cut(s) 538, 757, 931
TaiI ACGT 1 cut(s) 590
TaqI TCGA 1 cut(s) 169
TasI AATT 6 cut(s) 48, 150, 225, 264, 312, 827
TatI WGTACW 2 cut(s) 121, 538
Tru1I TTAA 2 cut(s) 525, 684
Tru9I TTAA 2 cut(s) 525, 684
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 1 cut(s) 72
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 6 cut(s) 78, 91, 346, 399, 645, 707
Tth111I GACNNNGTC 1 cut(s) 842
XapI RAATTY 2 cut(s) 150, 225
XbaI TCTAGA 1 cut(s) 664
XceI RCATGY 2 cut(s) 354, 678
XmiI GTMKAC 1 cut(s) 846
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 5 cut(s) 30, 212, 327, 665, 958
Zsp2I ATGCAT 1 cut(s) 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.