TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 971, 1548 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3470 |
| Acc16I | TGCGCA | 1 cut(s) | 1131 |
| Acc36I | ACCTGC | 1 cut(s) | 2908 |
| AccB1I | GGYRCC | 2 cut(s) | 307, 2731 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| AccI | GTMKAC | 5 cut(s) | 402, 513, 1497, 1632, 1944 |
| AccII | CGCG | 2 cut(s) | 1738, 3467 |
| AccIII | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| AciI | CCGC | 4 cut(s) | 292, 390, 1736, 3467 |
| AclI | AACGTT | 1 cut(s) | 1590 |
| AclWI | GGATC | 3 cut(s) | 323, 529, 825 |
| AcoI | YGGCCR | 2 cut(s) | 1733, 2747 |
| AcsI | RAATTY | 3 cut(s) | 801, 876, 2119 |
| AcuI | CTGAAG | 4 cut(s) | 827, 1533, 1856, 2039 |
| AcyI | GRCGYC | 1 cut(s) | 2732 |
| AdeI | CACNNNGTG | 1 cut(s) | 551 |
| AfaI | GTAC | 7 cut(s) | 774, 1000, 1191, 1450, 1764, 2035, 2942 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 947, 1397, 1996 |
| AflII | CTTAAG | 1 cut(s) | 350 |
| AflIII | ACRYGT | 3 cut(s) | 74, 1001, 1884 |
| AjiI | CACGTC | 1 cut(s) | 1239 |
| AjnI | CCWGG | 4 cut(s) | 1158, 2916, 3085, 3148 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 912, 944 |
| AleI | CACNNNNGTG | 1 cut(s) | 79 |
| Alw21I | GWGCWC | 5 cut(s) | 1732, 2531, 2603, 3341, 3383 |
| Alw44I | GTGCAC | 2 cut(s) | 1728, 3379 |
| AlwI | GGATC | 3 cut(s) | 323, 529, 825 |
| Ama87I | CYCGRG | 2 cut(s) | 199, 1391 |
| Aor13HI | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| AoxI | GGCC | 3 cut(s) | 1733, 2747, 3347 |
| ApaI | GGGCCC | 1 cut(s) | 3351 |
| ApaLI | GTGCAC | 2 cut(s) | 1728, 3379 |
| ApeKI | GCWGC | 8 cut(s) | 5, 8, 504, 2103, 2271, 2313, 2903, 2976 |
| ApoI | RAATTY | 3 cut(s) | 801, 876, 2119 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1337, 1369 |
| AseI | ATTAAT | 2 cut(s) | 2205, 2415 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 361, 577, 789, 3094 |
| AspLEI | GCGC | 2 cut(s) | 1132, 2734 |
| AspS9I | GGNCC | 4 cut(s) | 265, 2092, 3347, 3348 |
| AsuC2I | CCSGG | 1 cut(s) | 2218 |
| AsuHPI | GGTGA | 4 cut(s) | 537, 2045, 2737, 2998 |
| AvaI | CYCGRG | 2 cut(s) | 199, 1391 |
| AvaII | GGWCC | 2 cut(s) | 265, 2092 |
| BaeGI | GKGCMC | 4 cut(s) | 312, 1732, 3351, 3383 |
| BalI | TGGCCA | 1 cut(s) | 2749 |
| BanI | GGYRCC | 2 cut(s) | 307, 2731 |
| BanII | GRGCYC | 2 cut(s) | 1020, 3351 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3178, 3210 |
| BauI | CACGAG | 1 cut(s) | 2743 |
| BbsI | GAAGAC | 5 cut(s) | 75, 1130, 2465, 2609, 3186 |
| Bbv12I | GWGCWC | 5 cut(s) | 1732, 2531, 2603, 3341, 3383 |
| BbvI | GCAGC | 6 cut(s) | 516, 2090, 2283, 2300, 2915, 2963 |
| BccI | CCATC | 7 cut(s) | 102, 554, 827, 2065, 2825, 3186, 3298 |
| BceAI | ACGGC | 3 cut(s) | 1596, 1748, 2745 |
| BciT130I | CCWGG | 4 cut(s) | 1160, 2918, 3087, 3150 |
| BclI | TGATCA | 1 cut(s) | 2988 |
| BcnI | CCSGG | 1 cut(s) | 2218 |
| BfaI | CTAG | 9 cut(s) | 681, 863, 978, 1316, 1607, 2363, 2772, 3284, 3508 |
| BfmI | CTRYAG | 3 cut(s) | 1454, 1891, 2901 |
| BfoI | RGCGCY | 1 cut(s) | 2735 |
| BfrI | CTTAAG | 1 cut(s) | 350 |
| BfuAI | ACCTGC | 1 cut(s) | 2908 |
| BglII | AGATCT | 2 cut(s) | 270, 1421 |
| BisI | GCNGC | 9 cut(s) | 6, 9, 505, 1736, 2104, 2272, 2314, 2904, 2977 |
| BlsI | GCNGC | 9 cut(s) | 7, 10, 506, 1737, 2105, 2273, 2315, 2905, 2978 |
| Bme1390I | CCNGG | 5 cut(s) | 1160, 2218, 2918, 3087, 3150 |
| Bme18I | GGWCC | 2 cut(s) | 265, 2092 |
| BmeT110I | CYCGRG | 2 cut(s) | 199, 1391 |
| BmgBI | CACGTC | 1 cut(s) | 1239 |
| BmgT120I | GGNCC | 4 cut(s) | 265, 2092, 3347, 3348 |
| BmiI | GGNNCC | 8 cut(s) | 296, 309, 394, 1921, 2261, 2733, 2759, 3349 |
| BmrFI | CCNGG | 5 cut(s) | 1160, 2218, 2918, 3087, 3150 |
| BmrI | ACTGGG | 3 cut(s) | 1004, 2532, 2604 |
| BmsI | GCATC | 5 cut(s) | 245, 669, 1090, 1449, 2303 |
| BmuI | ACTGGG | 3 cut(s) | 1004, 2532, 2604 |
| BpiI | GAAGAC | 5 cut(s) | 75, 1130, 2465, 2609, 3186 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3323, 3355 |
| BpmI | CTGGAG | 4 cut(s) | 1664, 2243, 2278, 3459 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3340 |
| BpuEI | CTTGAG | 7 cut(s) | 752, 1093, 2030, 2099, 2515, 2525, 2587 |
| BpuMI | CCSGG | 1 cut(s) | 2218 |
| BsaAI | YACGTR | 2 cut(s) | 77, 1636 |
| BsaBI | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BsaHI | GRCGYC | 1 cut(s) | 2732 |
| BsaI | GGTCTC | 1 cut(s) | 2588 |
| BsaJI | CCNNGG | 1 cut(s) | 1159 |
| BsaWI | WCCGGW | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3320, 3350, 3417, 3447 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 274, 304, 947, 1397, 1996 |
| Bse118I | RCCGGY | 1 cut(s) | 1059 |
| Bse1I | ACTGG | 5 cut(s) | 129, 267, 999, 2527, 2599 |
| Bse3DI | GCAATG | 1 cut(s) | 2913 |
| Bse8I | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BseAI | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| BseBI | CCWGG | 4 cut(s) | 1160, 2918, 3087, 3150 |
| BseDI | CCNNGG | 1 cut(s) | 1159 |
| BseGI | GGATG | 8 cut(s) | 490, 628, 838, 2057, 2720, 2836, 3064, 3475 |
| BseJI | GATNNNNATC | 2 cut(s) | 539, 1296 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 947, 1397, 1996 |
| BseMI | GCAATG | 1 cut(s) | 2913 |
| BseMII | CTCAG | 5 cut(s) | 1986, 3090, 3108, 3354, 3489 |
| BseNI | ACTGG | 5 cut(s) | 129, 267, 999, 2527, 2599 |
| BseRI | GAGGAG | 6 cut(s) | 2372, 3116, 3341, 3344, 3347, 3482 |
| BseSI | GKGCMC | 4 cut(s) | 312, 1732, 3351, 3383 |
| BseX3I | CGGCCG | 1 cut(s) | 1733 |
| BseXI | GCAGC | 6 cut(s) | 516, 2090, 2283, 2300, 2915, 2963 |
| BseYI | CCCAGC | 2 cut(s) | 462, 492 |
| BsgI | GTGCAG | 5 cut(s) | 789, 893, 2440, 3227, 3338 |
| Bsh1236I | CGCG | 2 cut(s) | 1738, 3467 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1736 |
| BshFI | GGCC | 3 cut(s) | 1735, 2749, 3349 |
| BshNI | GGYRCC | 2 cut(s) | 307, 2731 |
| BsiEI | CGRYCG | 1 cut(s) | 1736 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1732, 2531, 2603, 3341, 3383 |
| BsiHKCI | CYCGRG | 2 cut(s) | 199, 1391 |
| BsiSI | CCGG | 8 cut(s) | 24, 1060, 2136, 2217, 2477, 2549, 2621, 2874 |
| BsiWI | CGTACG | 1 cut(s) | 2940 |
| BslFI | GGGAC | 4 cut(s) | 1214, 1502, 2398, 3501 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 947, 1397, 1996 |
| BsmBI | CGTCTC | 2 cut(s) | 1245, 2360 |
| BsmFI | GGGAC | 4 cut(s) | 1214, 1502, 2398, 3501 |
| BsmI | GAATGC | 2 cut(s) | 1530, 2274 |
| BsnI | GGCC | 3 cut(s) | 1735, 2749, 3349 |
| Bso31I | GGTCTC | 1 cut(s) | 2588 |
| BsoBI | CYCGRG | 2 cut(s) | 199, 1391 |
| Bsp120I | GGGCCC | 1 cut(s) | 3347 |
| Bsp1286I | GDGCHC | 8 cut(s) | 312, 1020, 1732, 2531, 2603, 3341, 3351, 3383 |
| Bsp13I | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| Bsp1407I | TGTACA | 3 cut(s) | 1189, 1762, 2033 |
| Bsp143I | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| BspACI | CCGC | 4 cut(s) | 292, 390, 1736, 3467 |
| BspANI | GGCC | 3 cut(s) | 1735, 2749, 3349 |
| BspCNI | CTCAG | 5 cut(s) | 1987, 3091, 3109, 3353, 3488 |
| BspEI | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| BspFNI | CGCG | 2 cut(s) | 1738, 3467 |
| BspHI | TCATGA | 1 cut(s) | 1770 |
| BspLI | GGNNCC | 8 cut(s) | 296, 309, 394, 1921, 2261, 2733, 2759, 3349 |
| BspMAI | CTGCAG | 1 cut(s) | 2905 |
| BspMI | ACCTGC | 1 cut(s) | 2908 |
| BspPI | GGATC | 3 cut(s) | 323, 529, 825 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 2 cut(s) | 307, 2731 |
| BspTI | CTTAAG | 1 cut(s) | 350 |
| BspTNI | GGTCTC | 1 cut(s) | 2588 |
| BsrDI | GCAATG | 1 cut(s) | 2913 |
| BsrFI | RCCGGY | 1 cut(s) | 1059 |
| BsrGI | TGTACA | 3 cut(s) | 1189, 1762, 2033 |
| BsrI | ACTGG | 5 cut(s) | 129, 267, 999, 2527, 2599 |
| BssAI | RCCGGY | 1 cut(s) | 1059 |
| BssECI | CCNNGG | 1 cut(s) | 1159 |
| BssMI | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| BssNAI | GTATAC | 1 cut(s) | 1633 |
| BssNI | GRCGYC | 1 cut(s) | 2732 |
| BssSI | CACGAG | 1 cut(s) | 2743 |
| Bst1107I | GTATAC | 1 cut(s) | 1633 |
| Bst2BI | CACGAG | 1 cut(s) | 2743 |
| Bst2UI | CCWGG | 4 cut(s) | 1160, 2918, 3087, 3150 |
| Bst4CI | ACNGT | 5 cut(s) | 612, 1189, 1408, 3137, 3205 |
| Bst6I | CTCTTC | 5 cut(s) | 141, 405, 3087, 3150, 3318 |
| BstACI | GRCGYC | 1 cut(s) | 2732 |
| BstAFI | CTTAAG | 1 cut(s) | 350 |
| BstAUI | TGTACA | 3 cut(s) | 1189, 1762, 2033 |
| BstBAI | YACGTR | 2 cut(s) | 77, 1636 |
| BstC8I | GCNNGC | 4 cut(s) | 1116, 1276, 2500, 2646 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1994 |
| BstF5I | GGATG | 8 cut(s) | 490, 628, 838, 2057, 2720, 2836, 3064, 3475 |
| BstFNI | CGCG | 2 cut(s) | 1738, 3467 |
| BstH2I | RGCGCY | 1 cut(s) | 2735 |
| BstHHI | GCGC | 2 cut(s) | 1132, 2734 |
| BstKTI | GATC | 8 cut(s) | 273, 331, 537, 820, 1424, 2212, 2305, 2991 |
| BstMBI | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| BstMCI | CGRYCG | 1 cut(s) | 1736 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1681, 2268, 2368 |
| BstNI | CCWGG | 4 cut(s) | 1160, 2918, 3087, 3150 |
| BstNSI | RCATGY | 5 cut(s) | 589, 1005, 1329, 1888, 2648 |
| BstSCI | CCNGG | 5 cut(s) | 1158, 2216, 2916, 3085, 3148 |
| BstSFI | CTRYAG | 3 cut(s) | 1454, 1891, 2901 |
| BstSLI | GKGCMC | 4 cut(s) | 312, 1732, 3351, 3383 |
| BstSNI | TACGTA | 1 cut(s) | 1636 |
| BstUI | CGCG | 2 cut(s) | 1738, 3467 |
| BstV1I | GCAGC | 6 cut(s) | 516, 2090, 2283, 2300, 2915, 2963 |
| BstV2I | GAAGAC | 5 cut(s) | 75, 1130, 2465, 2609, 3186 |
| BstX2I | RGATCY | 3 cut(s) | 270, 328, 1421 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3222 |
| BstYI | RGATCY | 3 cut(s) | 270, 328, 1421 |
| BstZ17I | GTATAC | 1 cut(s) | 1633 |
| BstZI | CGGCCG | 1 cut(s) | 1733 |
| BsuRI | GGCC | 3 cut(s) | 1735, 2749, 3349 |
| BtrI | CACGTC | 1 cut(s) | 1239 |
| BtsCI | GGATG | 8 cut(s) | 490, 628, 838, 2057, 2720, 2836, 3064, 3475 |
| BtsIMutI | CAGTG | 4 cut(s) | 122, 1185, 1832, 1992 |
| BveI | ACCTGC | 1 cut(s) | 2908 |
| Cac8I | GCNNGC | 4 cut(s) | 1116, 1276, 2500, 2646 |
| CciI | TCATGA | 1 cut(s) | 1770 |
| CfoI | GCGC | 2 cut(s) | 1132, 2734 |
| Cfr10I | RCCGGY | 1 cut(s) | 1059 |
| Cfr13I | GGNCC | 4 cut(s) | 265, 2092, 3347, 3348 |
| CseI | GACGC | 2 cut(s) | 2377, 3473 |
| Csp6I | GTAC | 7 cut(s) | 773, 999, 1190, 1449, 1763, 2034, 2941 |
| CviQI | GTAC | 7 cut(s) | 773, 999, 1190, 1449, 1763, 2034, 2941 |
| DinI | GGCGCC | 1 cut(s) | 2733 |
| DpnI | GATC | 8 cut(s) | 272, 330, 536, 819, 1423, 2211, 2304, 2990 |
| DpnII | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| DraIII | CACNNNGTG | 1 cut(s) | 551 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3470 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3470 |
| EaeI | YGGCCR | 2 cut(s) | 1733, 2747 |
| EagI | CGGCCG | 1 cut(s) | 1733 |
| Eam1104I | CTCTTC | 5 cut(s) | 141, 405, 3087, 3150, 3318 |
| EarI | CTCTTC | 5 cut(s) | 141, 405, 3087, 3150, 3318 |
| EciI | GGCGGA | 1 cut(s) | 307 |
| EclXI | CGGCCG | 1 cut(s) | 1733 |
| Eco105I | TACGTA | 1 cut(s) | 1636 |
| Eco24I | GRGCYC | 2 cut(s) | 1020, 3351 |
| Eco31I | GGTCTC | 1 cut(s) | 2588 |
| Eco47I | GGWCC | 2 cut(s) | 265, 2092 |
| Eco52I | CGGCCG | 1 cut(s) | 1733 |
| Eco57I | CTGAAG | 4 cut(s) | 827, 1533, 1856, 2039 |
| Eco88I | CYCGRG | 2 cut(s) | 199, 1391 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1994 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3347 |
| EcoRII | CCWGG | 4 cut(s) | 1158, 2916, 3085, 3148 |
| EcoT22I | ATGCAT | 2 cut(s) | 591, 1464 |
| EcoT38I | GRGCYC | 2 cut(s) | 1020, 3351 |
| EgeI | GGCGCC | 1 cut(s) | 2733 |
| EheI | GGCGCC | 1 cut(s) | 2733 |
| Esp3I | CGTCTC | 2 cut(s) | 1245, 2360 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 734, 766, 1029, 1061 |
| FaqI | GGGAC | 4 cut(s) | 1214, 1502, 2398, 3501 |
| FauNDI | CATATG | 1 cut(s) | 3353 |
| FbaI | TGATCA | 1 cut(s) | 2988 |
| FblI | GTMKAC | 5 cut(s) | 402, 513, 1497, 1632, 1944 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 9, 505, 1736, 2104, 2272, 2314, 2904, 2977 |
| FokI | GGATG | 8 cut(s) | 497, 635, 845, 2044, 2727, 2843, 3051, 3482 |
| FriOI | GRGCYC | 2 cut(s) | 1020, 3351 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 9, 505, 1736, 2104, 2272, 2314, 2904, 2977 |
| FspAI | RTGCGCAY | 1 cut(s) | 1131 |
| FspBI | CTAG | 9 cut(s) | 681, 863, 978, 1316, 1607, 2363, 2772, 3284, 3508 |
| FspI | TGCGCA | 1 cut(s) | 1131 |
| GlaI | GCGC | 2 cut(s) | 1131, 2733 |
| GluI | GCNGC | 9 cut(s) | 6, 9, 505, 1736, 2104, 2272, 2314, 2904, 2977 |
| GsaI | CCCAGC | 2 cut(s) | 466, 496 |
| GsuI | CTGGAG | 4 cut(s) | 1664, 2243, 2278, 3459 |
| HaeII | RGCGCY | 1 cut(s) | 2735 |
| HaeIII | GGCC | 3 cut(s) | 1735, 2749, 3349 |
| HapII | CCGG | 8 cut(s) | 24, 1060, 2136, 2217, 2477, 2549, 2621, 2874 |
| HgaI | GACGC | 2 cut(s) | 2377, 3473 |
| HhaI | GCGC | 2 cut(s) | 1132, 2734 |
| Hin1I | GRCGYC | 1 cut(s) | 2732 |
| Hin6I | GCGC | 2 cut(s) | 1130, 2732 |
| HinP1I | GCGC | 2 cut(s) | 1130, 2732 |
| HincII | GTYRAC | 4 cut(s) | 403, 672, 1029, 1882 |
| HindII | GTYRAC | 4 cut(s) | 403, 672, 1029, 1882 |
| HindIII | AAGCTT | 2 cut(s) | 369, 2021 |
| HpaII | CCGG | 8 cut(s) | 24, 1060, 2136, 2217, 2477, 2549, 2621, 2874 |
| HphI | GGTGA | 4 cut(s) | 537, 2045, 2737, 2998 |
| Hpy99I | CGWCG | 2 cut(s) | 47, 167 |
| HpyCH4III | ACNGT | 5 cut(s) | 612, 1189, 1408, 3137, 3205 |
| HpyCH4IV | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1681, 2268, 2368 |
| HpySE526I | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| Hsp92I | GRCGYC | 1 cut(s) | 2732 |
| HspAI | GCGC | 2 cut(s) | 1130, 2732 |
| KasI | GGCGCC | 1 cut(s) | 2731 |
| Kpn2I | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| Ksp22I | TGATCA | 1 cut(s) | 2988 |
| Kzo9I | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 7 cut(s) | 175, 294, 957, 1163, 2149, 2259, 2359 |
| Lsp1109I | GCAGC | 6 cut(s) | 516, 2090, 2283, 2300, 2915, 2963 |
| LweI | GCATC | 5 cut(s) | 245, 669, 1090, 1449, 2303 |
| MaeI | CTAG | 9 cut(s) | 681, 863, 978, 1316, 1607, 2363, 2772, 3284, 3508 |
| MaeII | ACGT | 6 cut(s) | 45, 76, 1238, 1590, 1635, 1878 |
| MaeIII | GTNAC | 9 cut(s) | 990, 1357, 1429, 2725, 2774, 2804, 3131, 3199, 3210 |
| MalI | GATC | 8 cut(s) | 272, 330, 536, 819, 1423, 2211, 2304, 2990 |
| MboI | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| MfeI | CAATTG | 1 cut(s) | 1848 |
| MflI | RGATCY | 3 cut(s) | 270, 328, 1421 |
| MhlI | GDGCHC | 8 cut(s) | 312, 1020, 1732, 2531, 2603, 3341, 3351, 3383 |
| MlsI | TGGCCA | 1 cut(s) | 2749 |
| MluNI | TGGCCA | 1 cut(s) | 2749 |
| Mly113I | GGCGCC | 1 cut(s) | 2732 |
| MlyI | GAGTC | 3 cut(s) | 2516, 3464, 3483 |
| MmeI | TCCRAC | 5 cut(s) | 396, 619, 1191, 2070, 2868 |
| Mox20I | TGGCCA | 1 cut(s) | 2749 |
| Mph1103I | ATGCAT | 2 cut(s) | 591, 1464 |
| MroI | TCCGGA | 6 cut(s) | 23, 2135, 2476, 2548, 2620, 2873 |
| MroXI | GAANNNNTTC | 4 cut(s) | 361, 577, 789, 3094 |
| MscI | TGGCCA | 1 cut(s) | 2749 |
| MslI | CAYNNNNRTG | 4 cut(s) | 79, 711, 2279, 2704 |
| Msp20I | TGGCCA | 1 cut(s) | 2749 |
| MspCI | CTTAAG | 1 cut(s) | 350 |
| MspI | CCGG | 8 cut(s) | 24, 1060, 2136, 2217, 2477, 2549, 2621, 2874 |
| MspR9I | CCNGG | 5 cut(s) | 1160, 2218, 2918, 3087, 3150 |
| MunI | CAATTG | 1 cut(s) | 1848 |
| Mva1269I | GAATGC | 2 cut(s) | 1530, 2274 |
| MvaI | CCWGG | 4 cut(s) | 1160, 2918, 3087, 3150 |
| MvnI | CGCG | 2 cut(s) | 1738, 3467 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1681, 2268, 2368 |
| NarI | GGCGCC | 1 cut(s) | 2732 |
| NciI | CCSGG | 1 cut(s) | 2218 |
| NdeI | CATATG | 1 cut(s) | 3353 |
| NdeII | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| NlaIV | GGNNCC | 8 cut(s) | 296, 309, 394, 1921, 2261, 2733, 2759, 3349 |
| NmeAIII | GCCGAG | 1 cut(s) | 2971 |
| NmuCI | GTSAC | 3 cut(s) | 1429, 2725, 2804 |
| NsbI | TGCGCA | 1 cut(s) | 1131 |
| NsiI | ATGCAT | 2 cut(s) | 591, 1464 |
| NspI | RCATGY | 5 cut(s) | 589, 1005, 1329, 1888, 2648 |
| OliI | CACNNNNGTG | 1 cut(s) | 79 |
| PaeI | GCATGC | 1 cut(s) | 2648 |
| PaeR7I | CTCGAG | 1 cut(s) | 199 |
| PagI | TCATGA | 1 cut(s) | 1770 |
| PciI | ACATGT | 2 cut(s) | 1001, 1884 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 206 |
| PctI | GAATGC | 2 cut(s) | 1530, 2274 |
| PdmI | GAANNNNTTC | 4 cut(s) | 361, 577, 789, 3094 |
| Pfl23II | CGTACG | 1 cut(s) | 2940 |
| PflFI | GACNNNGTC | 1 cut(s) | 1493 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| PfoI | TCCNGGA | 2 cut(s) | 3085, 3148 |
| PkrI | GCNGC | 9 cut(s) | 7, 10, 506, 1737, 2105, 2273, 2315, 2905, 2978 |
| PleI | GAGTC | 3 cut(s) | 2515, 3463, 3483 |
| PluTI | GGCGCC | 1 cut(s) | 2735 |
| PpsI | GAGTC | 3 cut(s) | 2515, 3463, 3483 |
| Ppu21I | YACGTR | 2 cut(s) | 77, 1636 |
| PscI | ACATGT | 2 cut(s) | 1001, 1884 |
| PshBI | ATTAAT | 2 cut(s) | 2205, 2415 |
| PsiI | TTATAA | 2 cut(s) | 971, 1548 |
| Psp1406I | AACGTT | 1 cut(s) | 1590 |
| Psp6I | CCWGG | 4 cut(s) | 1158, 2916, 3085, 3148 |
| PspFI | CCCAGC | 2 cut(s) | 462, 492 |
| PspGI | CCWGG | 4 cut(s) | 1158, 2916, 3085, 3148 |
| PspLI | CGTACG | 1 cut(s) | 2940 |
| PspN4I | GGNNCC | 8 cut(s) | 296, 309, 394, 1921, 2261, 2733, 2759, 3349 |
| PspOMI | GGGCCC | 1 cut(s) | 3347 |
| PspPI | GGNCC | 4 cut(s) | 265, 2092, 3347, 3348 |
| PspXI | VCTCGAGB | 1 cut(s) | 199 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1746, 1778 |
| PstI | CTGCAG | 1 cut(s) | 2905 |
| PsuI | RGATCY | 3 cut(s) | 270, 328, 1421 |
| PsyI | GACNNNGTC | 1 cut(s) | 1493 |
| RsaI | GTAC | 7 cut(s) | 774, 1000, 1191, 1450, 1764, 2035, 2942 |
| RsaNI | GTAC | 7 cut(s) | 773, 999, 1190, 1449, 1763, 2034, 2941 |
| RseI | CAYNNNNRTG | 4 cut(s) | 79, 711, 2279, 2704 |
| SalI | GTCGAC | 1 cut(s) | 401 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SatI | GCNGC | 9 cut(s) | 6, 9, 505, 1736, 2104, 2272, 2314, 2904, 2977 |
| Sau3AI | GATC | 8 cut(s) | 270, 328, 534, 817, 1421, 2209, 2302, 2988 |
| Sau96I | GGNCC | 4 cut(s) | 265, 2092, 3347, 3348 |
| SchI | GAGTC | 3 cut(s) | 2516, 3464, 3483 |
| ScrFI | CCNGG | 5 cut(s) | 1160, 2218, 2918, 3087, 3150 |
| SduI | GDGCHC | 8 cut(s) | 312, 1020, 1732, 2531, 2603, 3341, 3351, 3383 |
| SfaNI | GCATC | 5 cut(s) | 245, 669, 1090, 1449, 2303 |
| SfcI | CTRYAG | 3 cut(s) | 1454, 1891, 2901 |
| SfoI | GGCGCC | 1 cut(s) | 2733 |
| Sfr274I | CTCGAG | 1 cut(s) | 199 |
| SinI | GGWCC | 2 cut(s) | 265, 2092 |
| SlaI | CTCGAG | 1 cut(s) | 199 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 79, 711, 2279, 2704 |
| SmlI | CTYRAG | 9 cut(s) | 199, 350, 731, 1108, 2009, 2114, 2504, 2530, 2602 |
| SmoI | CTYRAG | 9 cut(s) | 199, 350, 731, 1108, 2009, 2114, 2504, 2530, 2602 |
| SnaBI | TACGTA | 1 cut(s) | 1636 |
| SphI | GCATGC | 1 cut(s) | 2648 |
| SsiI | CCGC | 4 cut(s) | 292, 390, 1736, 3467 |
| SspDI | GGCGCC | 1 cut(s) | 2731 |
| SspI | AATATT | 4 cut(s) | 1085, 1311, 1694, 3034 |
| SspMI | CTAG | 9 cut(s) | 681, 863, 978, 1316, 1607, 2363, 2772, 3284, 3508 |
| StyD4I | CCNGG | 5 cut(s) | 1158, 2216, 2916, 3085, 3148 |
| TaaI | ACNGT | 5 cut(s) | 612, 1189, 1408, 3137, 3205 |
| TaiI | ACGT | 6 cut(s) | 48, 79, 1241, 1593, 1638, 1881 |
| TaqI | TCGA | 5 cut(s) | 200, 209, 402, 820, 2318 |
| TaqII | GACCGA | 1 cut(s) | 2780 |
| TatI | WGTACW | 4 cut(s) | 772, 1189, 1762, 2033 |
| TauI | GCSGC | 1 cut(s) | 1738 |
| TscAI | CASTG | 4 cut(s) | 129, 1192, 1839, 1999 |
| TseFI | GTSAC | 3 cut(s) | 1429, 2725, 2804 |
| TseI | GCWGC | 8 cut(s) | 5, 8, 504, 2103, 2271, 2313, 2903, 2976 |
| Tsp45I | GTSAC | 3 cut(s) | 1429, 2725, 2804 |
| TspGWI | ACGGA | 3 cut(s) | 2342, 2928, 3187 |
| TspRI | CASTG | 4 cut(s) | 129, 1192, 1839, 1999 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1493 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| Vha464I | CTTAAG | 1 cut(s) | 350 |
| VneI | GTGCAC | 2 cut(s) | 1728, 3379 |
| VpaK11BI | GGWCC | 2 cut(s) | 265, 2092 |
| VspI | ATTAAT | 2 cut(s) | 2205, 2415 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1994 |
| XapI | RAATTY | 3 cut(s) | 801, 876, 2119 |
| XbaI | TCTAGA | 1 cut(s) | 1315 |
| XceI | RCATGY | 5 cut(s) | 589, 1005, 1329, 1888, 2648 |
| XhoI | CTCGAG | 1 cut(s) | 199 |
| XmiI | GTMKAC | 5 cut(s) | 402, 513, 1497, 1632, 1944 |
| XmnI | GAANNNNTTC | 4 cut(s) | 361, 577, 789, 3094 |
| XspI | CTAG | 9 cut(s) | 681, 863, 978, 1316, 1607, 2363, 2772, 3284, 3508 |
| Zsp2I | ATGCAT | 2 cut(s) | 591, 1464 |