TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_3 | PF07725 | 89 - 108 | 2.5e-06 | Leucine Rich Repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 57 |
| AclWI | GGATC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AgsI | TTSAA | 3 cut(s) | 20, 184, 302 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| Alw26I | GTCTC | 1 cut(s) | 85 |
| AlwI | GGATC | 1 cut(s) | 132 |
| AoxI | GGCC | 1 cut(s) | 257 |
| BccI | CCATC | 1 cut(s) | 253 |
| BcoDI | GTCTC | 1 cut(s) | 85 |
| BfaI | CTAG | 2 cut(s) | 32, 328 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| BmsI | GCATC | 1 cut(s) | 215 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| Bse3DI | GCAATG | 1 cut(s) | 239 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseGI | GGATG | 2 cut(s) | 230, 245 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseMI | GCAATG | 1 cut(s) | 239 |
| BsgI | GTGCAG | 1 cut(s) | 171 |
| BshFI | GGCC | 1 cut(s) | 259 |
| BslFI | GGGAC | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmAI | GTCTC | 1 cut(s) | 85 |
| BsmFI | GGGAC | 1 cut(s) | 191 |
| BsnI | GGCC | 1 cut(s) | 259 |
| Bsp143I | GATC | 1 cut(s) | 124 |
| BspANI | GGCC | 1 cut(s) | 259 |
| BspPI | GGATC | 1 cut(s) | 132 |
| BsrDI | GCAATG | 1 cut(s) | 239 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 1 cut(s) | 124 |
| BssNAI | GTATAC | 1 cut(s) | 58 |
| Bst1107I | GTATAC | 1 cut(s) | 58 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 1 cut(s) | 218 |
| BstDEI | CTNAG | 1 cut(s) | 95 |
| BstF5I | GGATG | 2 cut(s) | 230, 245 |
| BstKTI | GATC | 1 cut(s) | 127 |
| BstMAI | GTCTC | 1 cut(s) | 85 |
| BstMBI | GATC | 1 cut(s) | 124 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstZ17I | GTATAC | 1 cut(s) | 58 |
| BsuRI | GGCC | 1 cut(s) | 259 |
| BtsCI | GGATG | 2 cut(s) | 230, 245 |
| Cac8I | GCNNGC | 1 cut(s) | 218 |
| CviJI | RGCY | 5 cut(s) | 5, 31, 130, 208, 259 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 31, 130, 208, 259 |
| DdeI | CTNAG | 1 cut(s) | 95 |
| DpnI | GATC | 1 cut(s) | 126 |
| DpnII | GATC | 1 cut(s) | 124 |
| FaiI | YATR | 4 cut(s) | 26, 58, 62, 168 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 20, 52 |
| FaqI | GGGAC | 1 cut(s) | 191 |
| FblI | GTMKAC | 1 cut(s) | 57 |
| FokI | GGATG | 2 cut(s) | 232, 237 |
| FspBI | CTAG | 2 cut(s) | 32, 328 |
| HaeIII | GGCC | 1 cut(s) | 259 |
| HinfI | GANTC | 3 cut(s) | 108, 142, 265 |
| Hpy166II | GTNNAC | 1 cut(s) | 58 |
| Hpy188I | TCNGA | 2 cut(s) | 107, 196 |
| Hpy8I | GTNNAC | 1 cut(s) | 58 |
| HpyAV | CCTTC | 1 cut(s) | 308 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 2 cut(s) | 42, 152 |
| HpyF3I | CTNAG | 1 cut(s) | 95 |
| Kzo9I | GATC | 1 cut(s) | 124 |
| LpnPI | CCDG | 2 cut(s) | 150, 202 |
| LweI | GCATC | 1 cut(s) | 215 |
| MaeI | CTAG | 2 cut(s) | 32, 328 |
| MaeIII | GTNAC | 1 cut(s) | 293 |
| MalI | GATC | 1 cut(s) | 126 |
| MboI | GATC | 1 cut(s) | 124 |
| MluCI | AATT | 2 cut(s) | 15, 112 |
| MmeI | TCCRAC | 1 cut(s) | 273 |
| MnlI | CCTC | 3 cut(s) | 167, 198, 255 |
| MseI | TTAA | 1 cut(s) | 78 |
| NdeII | GATC | 1 cut(s) | 124 |
| NmeAIII | GCCGAG | 1 cut(s) | 285 |
| NmuCI | GTSAC | 1 cut(s) | 293 |
| PfeI | GAWTC | 3 cut(s) | 108, 142, 265 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| Sau3AI | GATC | 1 cut(s) | 124 |
| SetI | ASST | 3 cut(s) | 33, 159, 279 |
| SfaNI | GCATC | 1 cut(s) | 215 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| Sse9I | AATT | 2 cut(s) | 15, 112 |
| SspMI | CTAG | 2 cut(s) | 32, 328 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 273 |
| TasI | AATT | 2 cut(s) | 15, 112 |
| TfiI | GAWTC | 3 cut(s) | 108, 142, 265 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TseFI | GTSAC | 1 cut(s) | 293 |
| Tsp45I | GTSAC | 1 cut(s) | 293 |
| TspGWI | ACGGA | 1 cut(s) | 237 |
| XmiI | GTMKAC | 1 cut(s) | 57 |
| XspI | CTAG | 2 cut(s) | 32, 328 |