TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 190 | 1.9e-52 | TIR domain |
| TIR_2 | PF13676 | 17 - 112 | 3.5e-16 | TIR domain |
| NB-ARC | PF00931 | 212 - 359 | 1e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 429 - 494 | 8.9e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 626 - 751 | 4.5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 693 - 778 | 3.1e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 759 - 820 | 1.2e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 780 - 929 | 7.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 972 - 1117 | 2.7e-16 | C-JID domain |
| WRKY | PF03106 | 1286 - 1343 | 6.2e-16 | WRKY DNA -binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2337, 4274 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4112 |
| Acc16I | TGCGCA | 1 cut(s) | 2742 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2830 |
| AccBSI | CCGCTC | 2 cut(s) | 446, 2938 |
| AccI | GTMKAC | 5 cut(s) | 135, 825, 3366, 3700, 3835 |
| AccII | CGCG | 2 cut(s) | 239, 1041 |
| AclI | AACGTT | 1 cut(s) | 943 |
| AclWI | GGATC | 8 cut(s) | 268, 326, 435, 1605, 1864, 2374, 3108, 3674 |
| AcoI | YGGCCR | 2 cut(s) | 684, 2492 |
| AcsI | RAATTY | 6 cut(s) | 711, 794, 1004, 1565, 2428, 3292 |
| AcuI | CTGAAG | 1 cut(s) | 1644 |
| AdeI | CACNNNGTG | 1 cut(s) | 252 |
| AfaI | GTAC | 8 cut(s) | 780, 2518, 2529, 2916, 3088, 3113, 3691, 4030 |
| AfeI | AGCGCT | 1 cut(s) | 1152 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 403, 1714, 2830, 2881, 2882, 3096, 3857 |
| AflII | CTTAAG | 2 cut(s) | 1946, 2051 |
| AflIII | ACRYGT | 3 cut(s) | 991, 2241, 4025 |
| AjnI | CCWGG | 5 cut(s) | 276, 2829, 2917, 3411, 3895 |
| AleI | CACNNNNGTG | 1 cut(s) | 1710 |
| Alw21I | GWGCWC | 3 cut(s) | 1414, 2327, 3523 |
| Alw26I | GTCTC | 5 cut(s) | 604, 1832, 2147, 2422, 2686 |
| AlwI | GGATC | 8 cut(s) | 268, 326, 435, 1605, 1864, 2374, 3108, 3674 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 277, 2283, 2420 |
| Ama87I | CYCGRG | 1 cut(s) | 78 |
| Aor51HI | AGCGCT | 1 cut(s) | 1152 |
| AoxI | GGCC | 6 cut(s) | 67, 288, 684, 1019, 2492, 3258 |
| ApeKI | GCWGC | 6 cut(s) | 5, 8, 418, 626, 1813, 2067 |
| ApoI | RAATTY | 6 cut(s) | 711, 794, 1004, 1565, 2428, 3292 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1055, 1070, 2217 |
| AspLEI | GCGC | 4 cut(s) | 1153, 2743, 3029, 3512 |
| AspS9I | GGNCC | 3 cut(s) | 178, 1020, 1987 |
| AsuC2I | CCSGG | 2 cut(s) | 632, 3831 |
| AsuHPI | GGTGA | 5 cut(s) | 1697, 1709, 2935, 4073, 4113 |
| AsuII | TTCGAA | 2 cut(s) | 2389, 3756 |
| AvaI | CYCGRG | 1 cut(s) | 78 |
| AvaII | GGWCC | 2 cut(s) | 178, 1987 |
| BalI | TGGCCA | 1 cut(s) | 2494 |
| BanII | GRGCYC | 1 cut(s) | 1414 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2947, 2979 |
| BauI | CACGAG | 1 cut(s) | 3677 |
| BbsI | GAAGAC | 6 cut(s) | 43, 128, 1611, 2261, 2955, 4024 |
| Bbv12I | GWGCWC | 3 cut(s) | 1414, 2327, 3523 |
| BbvI | GCAGC | 4 cut(s) | 405, 613, 1825, 2079 |
| BceAI | ACGGC | 6 cut(s) | 372, 699, 1572, 2231, 3014, 3231 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 359, 393, 3649, 3683 |
| BciT130I | CCWGG | 5 cut(s) | 278, 2831, 2919, 3413, 3897 |
| BclI | TGATCA | 1 cut(s) | 3985 |
| BcnI | CCSGG | 2 cut(s) | 632, 3831 |
| BcoDI | GTCTC | 5 cut(s) | 604, 1832, 2147, 2422, 2686 |
| BfaI | CTAG | 8 cut(s) | 866, 884, 981, 1277, 1304, 1400, 1955, 3188 |
| BfmI | CTRYAG | 2 cut(s) | 2251, 3723 |
| BfoI | RGCGCY | 1 cut(s) | 1154 |
| BfrI | CTTAAG | 2 cut(s) | 1946, 2051 |
| BglII | AGATCT | 3 cut(s) | 151, 1957, 2303 |
| BisI | GCNGC | 8 cut(s) | 6, 9, 419, 459, 627, 955, 1814, 2068 |
| BlpI | GCTNAGC | 1 cut(s) | 1533 |
| BlsI | GCNGC | 8 cut(s) | 7, 10, 420, 460, 628, 956, 1815, 2069 |
| Bme1390I | CCNGG | 7 cut(s) | 278, 632, 2831, 2919, 3413, 3831, 3897 |
| Bme18I | GGWCC | 2 cut(s) | 178, 1987 |
| BmeT110I | CYCGRG | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 3 cut(s) | 178, 1020, 1987 |
| BmiI | GGNNCC | 5 cut(s) | 2478, 3378, 3410, 3650, 4138 |
| BmrFI | CCNGG | 7 cut(s) | 278, 632, 2831, 2919, 3413, 3831, 3897 |
| BmrI | ACTGGG | 2 cut(s) | 275, 3429 |
| BmuI | ACTGGG | 2 cut(s) | 275, 3429 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1824 |
| BpiI | GAAGAC | 6 cut(s) | 43, 128, 1611, 2261, 2955, 4024 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 430, 462, 1885, 1917, 3407, 3439, 3556, 3588 |
| BpmI | CTGGAG | 2 cut(s) | 1113, 3188 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1147 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1533 |
| Bpu14I | TTCGAA | 2 cut(s) | 2389, 3756 |
| BpuEI | CTTGAG | 4 cut(s) | 1463, 1897, 1957, 2141 |
| BpuMI | CCSGG | 2 cut(s) | 632, 3831 |
| BsaBI | GATNNNNATC | 3 cut(s) | 439, 594, 2550 |
| BsaJI | CCNNGG | 5 cut(s) | 585, 630, 3046, 3200, 4077 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 403, 1714, 2830, 2881, 2882, 3096, 3857 |
| Bse1I | ACTGG | 4 cut(s) | 270, 2414, 3435, 3650 |
| Bse3DI | GCAATG | 4 cut(s) | 192, 687, 3980, 4054 |
| Bse8I | GATNNNNATC | 3 cut(s) | 439, 594, 2550 |
| BseBI | CCWGG | 5 cut(s) | 278, 2831, 2919, 3413, 3897 |
| BseDI | CCNNGG | 5 cut(s) | 585, 630, 3046, 3200, 4077 |
| BseGI | GGATG | 9 cut(s) | 502, 577, 640, 1784, 1994, 2575, 3478, 3637, 4189 |
| BseJI | GATNNNNATC | 3 cut(s) | 439, 594, 2550 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 403, 1714, 2830, 2881, 2882, 3096, 3857 |
| BseMI | GCAATG | 4 cut(s) | 192, 687, 3980, 4054 |
| BseNI | ACTGG | 4 cut(s) | 270, 2414, 3435, 3650 |
| BseRI | GAGGAG | 5 cut(s) | 9, 12, 1262, 3421, 3924 |
| BseXI | GCAGC | 4 cut(s) | 405, 613, 1825, 2079 |
| BseYI | CCCAGC | 1 cut(s) | 474 |
| BsgI | GTGCAG | 2 cut(s) | 449, 2062 |
| Bsh1236I | CGCG | 2 cut(s) | 239, 1041 |
| Bsh1285I | CGRYCG | 2 cut(s) | 397, 2800 |
| BshFI | GGCC | 6 cut(s) | 69, 290, 686, 1021, 2494, 3260 |
| BsiEI | CGRYCG | 2 cut(s) | 397, 2800 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1414, 2327, 3523 |
| BsiHKCI | CYCGRG | 1 cut(s) | 78 |
| BsiSI | CCGG | 2 cut(s) | 632, 3830 |
| BslFI | GGGAC | 2 cut(s) | 1490, 1730 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 403, 1714, 2830, 2881, 2882, 3096, 3857 |
| BsmAI | GTCTC | 5 cut(s) | 604, 1832, 2147, 2422, 2686 |
| BsmBI | CGTCTC | 2 cut(s) | 604, 1832 |
| BsmFI | GGGAC | 2 cut(s) | 1490, 1730 |
| BsmI | GAATGC | 3 cut(s) | 287, 1072, 2070 |
| BsnI | GGCC | 6 cut(s) | 69, 290, 686, 1021, 2494, 3260 |
| BsoBI | CYCGRG | 1 cut(s) | 78 |
| Bsp119I | TTCGAA | 2 cut(s) | 2389, 3756 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1414, 2327, 3523 |
| Bsp1407I | TGTACA | 2 cut(s) | 3689, 4028 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1533 |
| Bsp19I | CCATGG | 3 cut(s) | 585, 3200, 4077 |
| Bsp68I | TCGCGA | 1 cut(s) | 1041 |
| BspANI | GGCC | 6 cut(s) | 69, 290, 686, 1021, 2494, 3260 |
| BspFNI | CGCG | 2 cut(s) | 239, 1041 |
| BspHI | TCATGA | 4 cut(s) | 490, 1735, 2643, 4147 |
| BspLI | GGNNCC | 5 cut(s) | 2478, 3378, 3410, 3650, 4138 |
| BspMAI | CTGCAG | 1 cut(s) | 2255 |
| BspPI | GGATC | 8 cut(s) | 268, 326, 435, 1605, 1864, 2374, 3108, 3674 |
| BspT104I | TTCGAA | 2 cut(s) | 2389, 3756 |
| BspTI | CTTAAG | 2 cut(s) | 1946, 2051 |
| BsrBI | CCGCTC | 2 cut(s) | 446, 2938 |
| BsrDI | GCAATG | 4 cut(s) | 192, 687, 3980, 4054 |
| BsrGI | TGTACA | 2 cut(s) | 3689, 4028 |
| BsrI | ACTGG | 4 cut(s) | 270, 2414, 3435, 3650 |
| BssECI | CCNNGG | 5 cut(s) | 585, 630, 3046, 3200, 4077 |
| BssNAI | GTATAC | 1 cut(s) | 3836 |
| BssSI | CACGAG | 1 cut(s) | 3677 |
| BssT1I | CCWWGG | 4 cut(s) | 585, 3046, 3200, 4077 |
| Bst1107I | GTATAC | 1 cut(s) | 3836 |
| Bst2BI | CACGAG | 1 cut(s) | 3677 |
| Bst2UI | CCWGG | 5 cut(s) | 278, 2831, 2919, 3413, 3897 |
| Bst6I | CTCTTC | 2 cut(s) | 1061, 3557 |
| BstAFI | CTTAAG | 2 cut(s) | 1946, 2051 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 427 |
| BstAUI | TGTACA | 2 cut(s) | 3689, 4028 |
| BstBI | TTCGAA | 2 cut(s) | 2389, 3756 |
| BstC8I | GCNNGC | 5 cut(s) | 472, 1781, 1866, 2461, 3421 |
| BstDSI | CCRYGG | 3 cut(s) | 585, 3200, 4077 |
| BstF5I | GGATG | 9 cut(s) | 502, 577, 640, 1784, 1994, 2575, 3478, 3637, 4189 |
| BstFNI | CGCG | 2 cut(s) | 239, 1041 |
| BstH2I | RGCGCY | 1 cut(s) | 1154 |
| BstHHI | GCGC | 4 cut(s) | 1153, 2743, 3029, 3512 |
| BstMAI | GTCTC | 5 cut(s) | 604, 1832, 2147, 2422, 2686 |
| BstMCI | CGRYCG | 2 cut(s) | 397, 2800 |
| BstNI | CCWGG | 5 cut(s) | 278, 2831, 2919, 3413, 3897 |
| BstNSI | RCATGY | 6 cut(s) | 17, 995, 1317, 1825, 2245, 4029 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1824 |
| BstSCI | CCNGG | 7 cut(s) | 276, 630, 2829, 2917, 3411, 3829, 3895 |
| BstSFI | CTRYAG | 2 cut(s) | 2251, 3723 |
| BstUI | CGCG | 2 cut(s) | 239, 1041 |
| BstV1I | GCAGC | 4 cut(s) | 405, 613, 1825, 2079 |
| BstV2I | GAAGAC | 6 cut(s) | 43, 128, 1611, 2261, 2955, 4024 |
| BstX2I | RGATCY | 9 cut(s) | 151, 273, 331, 440, 1610, 1856, 1957, 2303, 2366 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2991 |
| BstYI | RGATCY | 9 cut(s) | 151, 273, 331, 440, 1610, 1856, 1957, 2303, 2366 |
| BstZ17I | GTATAC | 1 cut(s) | 3836 |
| BsuRI | GGCC | 6 cut(s) | 69, 290, 686, 1021, 2494, 3260 |
| BtgI | CCRYGG | 3 cut(s) | 585, 3200, 4077 |
| BtgZI | GCGATG | 1 cut(s) | 1056 |
| BtsCI | GGATG | 9 cut(s) | 502, 577, 640, 1784, 1994, 2575, 3478, 3637, 4189 |
| BtsI | GCAGTG | 1 cut(s) | 3667 |
| BtsIMutI | CAGTG | 4 cut(s) | 2401, 2957, 3553, 3667 |
| BtuMI | TCGCGA | 1 cut(s) | 1041 |
| Cac8I | GCNNGC | 5 cut(s) | 472, 1781, 1866, 2461, 3421 |
| CaiI | CAGNNNCTG | 3 cut(s) | 277, 2283, 2420 |
| CciI | TCATGA | 4 cut(s) | 490, 1735, 2643, 4147 |
| CfoI | GCGC | 4 cut(s) | 1153, 2743, 3029, 3512 |
| Cfr13I | GGNCC | 3 cut(s) | 178, 1020, 1987 |
| CseI | GACGC | 1 cut(s) | 1814 |
| Csp6I | GTAC | 8 cut(s) | 779, 2517, 2528, 2915, 3087, 3112, 3690, 4029 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1876, 1911 |
| CviQI | GTAC | 8 cut(s) | 779, 2517, 2528, 2915, 3087, 3112, 3690, 4029 |
| DraI | TTTAAA | 2 cut(s) | 1324, 3505 |
| DraIII | CACNNNGTG | 1 cut(s) | 252 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4112 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4112 |
| EaeI | YGGCCR | 2 cut(s) | 684, 2492 |
| Eam1104I | CTCTTC | 2 cut(s) | 1061, 3557 |
| EarI | CTCTTC | 2 cut(s) | 1061, 3557 |
| EciI | GGCGGA | 1 cut(s) | 972 |
| Ecl136II | GAGCTC | 1 cut(s) | 1412 |
| Eco130I | CCWWGG | 4 cut(s) | 585, 3046, 3200, 4077 |
| Eco24I | GRGCYC | 1 cut(s) | 1414 |
| Eco32I | GATATC | 3 cut(s) | 555, 1766, 1907 |
| Eco47I | GGWCC | 2 cut(s) | 178, 1987 |
| Eco47III | AGCGCT | 1 cut(s) | 1152 |
| Eco53kI | GAGCTC | 1 cut(s) | 1412 |
| Eco57I | CTGAAG | 1 cut(s) | 1644 |
| Eco88I | CYCGRG | 1 cut(s) | 78 |
| EcoICRI | GAGCTC | 1 cut(s) | 1412 |
| EcoRII | CCWGG | 5 cut(s) | 276, 2829, 2917, 3411, 3895 |
| EcoRV | GATATC | 3 cut(s) | 555, 1766, 1907 |
| EcoT14I | CCWWGG | 4 cut(s) | 585, 3046, 3200, 4077 |
| EcoT22I | ATGCAT | 1 cut(s) | 1452 |
| EcoT38I | GRGCYC | 1 cut(s) | 1414 |
| ErhI | CCWWGG | 4 cut(s) | 585, 3046, 3200, 4077 |
| Esp3I | CGTCTC | 2 cut(s) | 604, 1832 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3585, 3617 |
| FaqI | GGGAC | 2 cut(s) | 1490, 1730 |
| FauI | CCCGC | 1 cut(s) | 1857 |
| FauNDI | CATATG | 2 cut(s) | 2076, 3926 |
| FbaI | TGATCA | 1 cut(s) | 3985 |
| FblI | GTMKAC | 5 cut(s) | 135, 825, 3366, 3700, 3835 |
| Fnu4HI | GCNGC | 8 cut(s) | 6, 9, 419, 459, 627, 955, 1814, 2068 |
| FokI | GGATG | 9 cut(s) | 509, 584, 647, 1771, 1981, 2582, 3485, 3644, 4196 |
| FriOI | GRGCYC | 1 cut(s) | 1414 |
| Fsp4HI | GCNGC | 8 cut(s) | 6, 9, 419, 459, 627, 955, 1814, 2068 |
| FspAI | RTGCGCAY | 1 cut(s) | 2742 |
| FspBI | CTAG | 8 cut(s) | 866, 884, 981, 1277, 1304, 1400, 1955, 3188 |
| FspI | TGCGCA | 1 cut(s) | 2742 |
| GlaI | GCGC | 4 cut(s) | 1152, 2742, 3028, 3511 |
| GluI | GCNGC | 8 cut(s) | 6, 9, 419, 459, 627, 955, 1814, 2068 |
| GsaI | CCCAGC | 1 cut(s) | 478 |
| GsuI | CTGGAG | 2 cut(s) | 1113, 3188 |
| HaeII | RGCGCY | 1 cut(s) | 1154 |
| HaeIII | GGCC | 6 cut(s) | 69, 290, 686, 1021, 2494, 3260 |
| HapII | CCGG | 2 cut(s) | 632, 3830 |
| HgaI | GACGC | 1 cut(s) | 1814 |
| HhaI | GCGC | 4 cut(s) | 1153, 2743, 3029, 3512 |
| Hin6I | GCGC | 4 cut(s) | 1151, 2741, 3027, 3510 |
| HinP1I | GCGC | 4 cut(s) | 1151, 2741, 3027, 3510 |
| HincII | GTYRAC | 4 cut(s) | 826, 3367, 3701, 3807 |
| HindII | GTYRAC | 4 cut(s) | 826, 3367, 3701, 3807 |
| HindIII | AAGCTT | 7 cut(s) | 206, 372, 383, 1439, 1626, 2435, 2629 |
| HpaII | CCGG | 2 cut(s) | 632, 3830 |
| HphI | GGTGA | 5 cut(s) | 1697, 1709, 2935, 4073, 4113 |
| Hpy99I | CGWCG | 2 cut(s) | 170, 3702 |
| HpyCH4IV | ACGT | 2 cut(s) | 943, 3768 |
| HpySE526I | ACGT | 2 cut(s) | 943, 3768 |
| HspAI | GCGC | 4 cut(s) | 1151, 2741, 3027, 3510 |
| Ksp22I | TGATCA | 1 cut(s) | 3985 |
| LmnI | GCTCC | 7 cut(s) | 22, 1166, 2482, 3408, 3899, 3983, 4136 |
| Lsp1109I | GCAGC | 4 cut(s) | 405, 613, 1825, 2079 |
| MaeI | CTAG | 8 cut(s) | 866, 884, 981, 1277, 1304, 1400, 1955, 3188 |
| MaeII | ACGT | 2 cut(s) | 943, 3768 |
| MbiI | CCGCTC | 2 cut(s) | 446, 2938 |
| MfeI | CAATTG | 1 cut(s) | 2208 |
| MflI | RGATCY | 9 cut(s) | 151, 273, 331, 440, 1610, 1856, 1957, 2303, 2366 |
| MhlI | GDGCHC | 3 cut(s) | 1414, 2327, 3523 |
| MlsI | TGGCCA | 1 cut(s) | 2494 |
| MluNI | TGGCCA | 1 cut(s) | 2494 |
| MlyI | GAGTC | 6 cut(s) | 209, 1424, 3179, 3362, 3924, 4275 |
| MmeI | TCCRAC | 6 cut(s) | 1812, 2355, 2538, 3316, 3563, 3767 |
| Mox20I | TGGCCA | 1 cut(s) | 2494 |
| Mph1103I | ATGCAT | 1 cut(s) | 1452 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1055, 1070, 2217 |
| MscI | TGGCCA | 1 cut(s) | 2494 |
| MslI | CAYNNNNRTG | 8 cut(s) | 495, 600, 851, 1710, 2075, 3141, 3630, 3681 |
| Msp20I | TGGCCA | 1 cut(s) | 2494 |
| MspCI | CTTAAG | 2 cut(s) | 1946, 2051 |
| MspI | CCGG | 2 cut(s) | 632, 3830 |
| MspR9I | CCNGG | 7 cut(s) | 278, 632, 2831, 2919, 3413, 3831, 3897 |
| MunI | CAATTG | 1 cut(s) | 2208 |
| Mva1269I | GAATGC | 3 cut(s) | 287, 1072, 2070 |
| MvaI | CCWGG | 5 cut(s) | 278, 2831, 2919, 3413, 3897 |
| MvnI | CGCG | 2 cut(s) | 239, 1041 |
| NciI | CCSGG | 2 cut(s) | 632, 3831 |
| NcoI | CCATGG | 3 cut(s) | 585, 3200, 4077 |
| NdeI | CATATG | 2 cut(s) | 2076, 3926 |
| NlaIV | GGNNCC | 5 cut(s) | 2478, 3378, 3410, 3650, 4138 |
| NmeAIII | GCCGAG | 3 cut(s) | 223, 529, 3404 |
| NmuCI | GTSAC | 5 cut(s) | 1832, 3443, 3455, 4103, 4195 |
| NruI | TCGCGA | 1 cut(s) | 1041 |
| NsbI | TGCGCA | 1 cut(s) | 2742 |
| NsiI | ATGCAT | 1 cut(s) | 1452 |
| NspI | RCATGY | 6 cut(s) | 17, 995, 1317, 1825, 2245, 4029 |
| NspV | TTCGAA | 2 cut(s) | 2389, 3756 |
| OliI | CACNNNNGTG | 1 cut(s) | 1710 |
| PaeR7I | CTCGAG | 1 cut(s) | 78 |
| PagI | TCATGA | 4 cut(s) | 490, 1735, 2643, 4147 |
| PciI | ACATGT | 3 cut(s) | 991, 2241, 4025 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 822, 903, 3675 |
| PctI | GAATGC | 3 cut(s) | 287, 1072, 2070 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1055, 1070, 2217 |
| PflFI | GACNNNGTC | 1 cut(s) | 4109 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2830 |
| PfoI | TCCNGGA | 2 cut(s) | 276, 2829 |
| PkrI | GCNGC | 8 cut(s) | 7, 10, 420, 460, 628, 956, 1815, 2069 |
| PleI | GAGTC | 6 cut(s) | 208, 1424, 3178, 3362, 3923, 4275 |
| PpsI | GAGTC | 6 cut(s) | 208, 1424, 3178, 3362, 3923, 4275 |
| PscI | ACATGT | 3 cut(s) | 991, 2241, 4025 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1824 |
| PsiI | TTATAA | 2 cut(s) | 2337, 4274 |
| Psp124BI | GAGCTC | 1 cut(s) | 1414 |
| Psp1406I | AACGTT | 1 cut(s) | 943 |
| Psp6I | CCWGG | 5 cut(s) | 276, 2829, 2917, 3411, 3895 |
| PspFI | CCCAGC | 1 cut(s) | 474 |
| PspGI | CCWGG | 5 cut(s) | 276, 2829, 2917, 3411, 3895 |
| PspN4I | GGNNCC | 5 cut(s) | 2478, 3378, 3410, 3650, 4138 |
| PspPI | GGNCC | 3 cut(s) | 178, 1020, 1987 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1338, 1370 |
| PstI | CTGCAG | 1 cut(s) | 2255 |
| PstNI | CAGNNNCTG | 3 cut(s) | 277, 2283, 2420 |
| PsuI | RGATCY | 9 cut(s) | 151, 273, 331, 440, 1610, 1856, 1957, 2303, 2366 |
| PsyI | GACNNNGTC | 1 cut(s) | 4109 |
| RruI | TCGCGA | 1 cut(s) | 1041 |
| RsaI | GTAC | 8 cut(s) | 780, 2518, 2529, 2916, 3088, 3113, 3691, 4030 |
| RsaNI | GTAC | 8 cut(s) | 779, 2517, 2528, 2915, 3087, 3112, 3690, 4029 |
| RseI | CAYNNNNRTG | 8 cut(s) | 495, 600, 851, 1710, 2075, 3141, 3630, 3681 |
| SacI | GAGCTC | 1 cut(s) | 1414 |
| SalI | GTCGAC | 3 cut(s) | 824, 3365, 3699 |
| SatI | GCNGC | 8 cut(s) | 6, 9, 419, 459, 627, 955, 1814, 2068 |
| Sau96I | GGNCC | 3 cut(s) | 178, 1020, 1987 |
| SchI | GAGTC | 6 cut(s) | 209, 1424, 3179, 3362, 3924, 4275 |
| ScrFI | CCNGG | 7 cut(s) | 278, 632, 2831, 2919, 3413, 3831, 3897 |
| SduI | GDGCHC | 3 cut(s) | 1414, 2327, 3523 |
| SfcI | CTRYAG | 2 cut(s) | 2251, 3723 |
| Sfr274I | CTCGAG | 1 cut(s) | 78 |
| SfuI | TTCGAA | 2 cut(s) | 2389, 3756 |
| SinI | GGWCC | 2 cut(s) | 178, 1987 |
| SlaI | CTCGAG | 1 cut(s) | 78 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 495, 600, 851, 1710, 2075, 3141, 3630, 3681 |
| SmlI | CTYRAG | 7 cut(s) | 78, 1442, 1876, 1946, 1972, 2051, 2120 |
| SmoI | CTYRAG | 7 cut(s) | 78, 1442, 1876, 1946, 1972, 2051, 2120 |
| SspMI | CTAG | 8 cut(s) | 866, 884, 981, 1277, 1304, 1400, 1955, 3188 |
| SstI | GAGCTC | 1 cut(s) | 1414 |
| StyD4I | CCNGG | 7 cut(s) | 276, 630, 2829, 2917, 3411, 3829, 3895 |
| StyI | CCWWGG | 4 cut(s) | 585, 3046, 3200, 4077 |
| TaiI | ACGT | 2 cut(s) | 946, 3771 |
| TaqII | GACCGA | 2 cut(s) | 1820, 2786 |
| TatI | WGTACW | 4 cut(s) | 778, 2516, 3689, 4028 |
| TauI | GCSGC | 2 cut(s) | 461, 957 |
| TscAI | CASTG | 4 cut(s) | 2401, 2957, 3553, 3667 |
| TseFI | GTSAC | 5 cut(s) | 1832, 3443, 3455, 4103, 4195 |
| TseI | GCWGC | 6 cut(s) | 5, 8, 418, 626, 1813, 2067 |
| Tsp45I | GTSAC | 5 cut(s) | 1832, 3443, 3455, 4103, 4195 |
| TspGWI | ACGGA | 5 cut(s) | 133, 1287, 1577, 1997, 2956 |
| TspRI | CASTG | 4 cut(s) | 2401, 2957, 3553, 3667 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4109 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2830 |
| Vha464I | CTTAAG | 2 cut(s) | 1946, 2051 |
| VpaK11BI | GGWCC | 2 cut(s) | 178, 1987 |
| XapI | RAATTY | 6 cut(s) | 711, 794, 1004, 1565, 2428, 3292 |
| XbaI | TCTAGA | 1 cut(s) | 1303 |
| XceI | RCATGY | 6 cut(s) | 17, 995, 1317, 1825, 2245, 4029 |
| XhoI | CTCGAG | 1 cut(s) | 78 |
| XmiI | GTMKAC | 5 cut(s) | 135, 825, 3366, 3700, 3835 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1055, 1070, 2217 |
| XspI | CTAG | 8 cut(s) | 866, 884, 981, 1277, 1304, 1400, 1955, 3188 |
| Zsp2I | ATGCAT | 1 cut(s) | 1452 |