RLG00000022777

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
12031311 .. 12035183
3873 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022777

Sequence Viewer

Length: 2727 bp
ATGATGGCTTTTTCATCTTCATCCGGTAGTCGTTGCAAGTATGATGTCTTTCTGAGTTTTAGAGGCGAAGACACCCGCAGAAACTTCGTTTGTCACCTTTACAAAGCTCTAGAACAGAAAGCAATCCACACCTTCATCGATTCTGAAGAGCTCAAAAAAGGCACCAAAATTTCCGAGTTACTGTGCGCTGTTGACGAATCGAGTATTTCGATTGTAATTTTATCTCAAAACTACGCCTCTTCCTCATGGTGCTTAAAAGAGCTCGTCAAAATCCTGGATTGCATGGATATGAAGAAGCGGATGGTGGTGCCCATTTTCTACCAAGTAGATCCCTCCGATATTCGTAAATTGAAGAAAGAATTTGGGGAAGCTGTTGCCAAACATGAAGAAAATCCTTATGCTGACCAGAAAGAGTTGGAGACCTGGAAAACTGCACTAACAAGAATCGCTGATCTATCCGGCTGGGACTCGCGAGAGTATAAGGATGACATCGAGCTTATTGAGAAAATCGTAGGAGACATCTTAAAAAAATGGATTAACATCCCCCGACCCTCCAGTACTCTAGCAAACAATTTGGTTGGAATGGATCATCACACTAAGGAAGTGAGTTTGCGATTGTGCCGTGGGAAGAATGATGTTGGTGTTGTTGGAATATGGGGTATGGGTGGTATAGGCAAAACAACCATAGCTAGAGCTGTTTATGACAAAATCGCTAATCAATTTGAACACAAGTGTTTTTTTTCTAATGTGAAAGAACGTTTTGCGAACAAGGAGGAAGAGCGAATGCGGGGAGAACTTCTAACTATGACCTTGAAGGGAAATGTGCAGAGTGCAGACATTTTGAATGAAGATTCCAATGCGACACTGGAAAGGCTAGGTAAGAAAAAAGTTTTACTTGTTCTTGATGATGTGGAAACGTTTTCCCAAATCGAAGCCTTACTTGGAGATTTTCTTTCATTTAGTGTTGGGAGTAGAATCCTTGTAACAACTAGAGATAAGGAATCACTAGCCGAAGTTTATGAGACATATGAGCCCATATGTTTAAATCGTAATGAATCTCTTGAACTCTTTATGAAGCATGCCTTCAGAAAAAACCAACCCAGTAAAGAGTATAGTGATCTCTCAAACCGAGCCATAGGGTATGCTCAGGGTCTGCCTTTAGCACTTAGAGTCTTGGGAGCTTCTCTTTATGACAAAAGTATACACCAGTGGAAAGAGCTGTTAGAGAAAGTCAAGATAACCCAGCAAAGGAAGATTCTGGATGTGCTTAGAACAAGCTATGAGGGACTAGACGATTTAGAGAAGGACACGTTTCTAGATATTGCATGTATCTTTAGAGGATGGAGCAAAAAAATTGTCACAGAATTATTAGACAGTTTTGGCTTTTTTCCCCACAATGGATTAAGAGTTCTAGTTGACAGATCTCTCATAACTATATCAGAAGACAATGAACTCGACATGCATGATTTACTACAAGACATGGGTAGAGAAATCGTCCGCCTTGAATCTCCTAAAGAACCTGGGAAGCGCAGTAGGTTGTGGAGCTTTGAAGATGTTAATCGTGTATTGTCTGAAAATACGGCGACGGATGCAGTTGAGTGCTTAATGCTAGACTTGTCGAACTCAAAAGTCGACCTATGCATACATACTGGAGCCTTTGTTAGAATGACGAAGCTAAGACTACTCATAATTCATTATTCATTCTTCAATAAATCTGACGACTTCCGCTTCGGCTGTTTTGGCGATGACGATGAGGATGACGATGACGATTACCTAAGCTGTGAGTATTTTGGTCCTGTTGATGGCGATCCAGAGTTGTTTATTAGGGGAGACTCGGAGTATCTTTCTAATGAATTGAGGTTTCTCTCATGGCATAGATGCCGGCTAAAGTCTTTGCCATCAACCTTTATCCCGAAAAATCTTGTTTACCTTGACATGCGTGATAGTCACATTCGAAAACTTTGGGAAGGAATCATGCCCCTACAAAATTTGAAAGTCATCAAGTTAAGCCATTGTCAATACCTTGTCAAAATCCCTGACTTGACTGAGGCGATAAATCTTGAGAAACTATTTCTTGATGGCTGTTCAAGTTTACTTGAGGTTCATTCATCCGTTTTTGCTCTTCAAAAACTTGAACTATTGGCTTTAAACGGGTGCAAAGAACTCAAGATTCCAAGCAGCATTCATATGACGGAGCTAAAAGGACTTTATCTAGGTGGGACTGCCGTTAAAGAACTACCCTCATCAATTTGCAATCTCACTGGGCTTTGTACTTTGGATCTCAGAGATTGCAGAGAACTTAAGACTCTACCAACCAGCATTCACGTGCCTTCTCTTCGGATCCTTCGCCTCGAAGGCTGCTCAAATATTGAAAAGTTCCCGGAGATTTCAGGAATCATGAAGGAGCTATCAGAGCTTAGATTAGATGCGACCGCCATTAAGGGACTACCCTCATCAATTGATCTGCTTGAGGGGCTTAAAGAATTAAGTATGCGGAATTGCAAAAGCCTTGTCTCTCTTCCTGACAGTATCTGTAATTTGGTACATCTTACAGATCTCAGACTGTCTGGATGCTCCAAACTTTCTAGTTTGCCAGAGAACATTGGGTCTTTAGAATCCTTGAAGAAGCTCTGGAATAATTACCTGCAGCCTCTTCGGTTGAAAATGTCTCTTCCTGGGAGTGAAGTCCTGATTGGTTCACCCATCGGAGCAGGGGATTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

909

Amino Acids

103.07

Weight (kDa)

5.78

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 13 - 194 6.8e-51 TIR domain
TIR_2 PF13676 16 - 111 8.8e-15 TIR domain
NB-ARC PF00931 197 - 365 2.3e-20 NB-ARC domain
WHD_ROQ1 PF23282 434 - 502 8.1e-20 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 707 - 774 2.4e-06 Leucine-rich repeat region
LRR_13 PF23286 708 - 775 2.8e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 776 - 862 3.7e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 778 - 880 7e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2652
AccB1I GGYRCC 2 cut(s) 161, 307
AccI GTMKAC 2 cut(s) 1201, 1632
AccII CGCG 1 cut(s) 472
AciI CCGC 7 cut(s) 76, 298, 787, 1498, 1726, 2433, 2494
AclI AACGTT 2 cut(s) 757, 917
AclWI GGATC 6 cut(s) 323, 594, 1802, 2286, 2335, 2348
AcsI RAATTY 3 cut(s) 168, 359, 1987
AcuI CTGAAG 2 cut(s) 165, 1069
AcvI CACGTG 1 cut(s) 2326
AfaI GTAC 3 cut(s) 559, 2272, 2544
AfiI CCNNNNNNNGG 3 cut(s) 1248, 1397, 1802
AflII CTTAAG 1 cut(s) 2300
AflIII ACRYGT 1 cut(s) 1308
AjnI CCWGG 4 cut(s) 273, 422, 1519, 2674
AjuI GAANNNNNNNTTGG 4 cut(s) 924, 956, 2676, 2708
AloI GAACNNNNNNTCC 2 cut(s) 1392, 1424
Alw21I GWGCWC 2 cut(s) 153, 264
Alw26I GTCTC 6 cut(s) 413, 510, 1016, 1824, 2518, 2673
AlwI GGATC 6 cut(s) 323, 594, 1802, 2286, 2335, 2348
AlwNI CAGNNNCTG 2 cut(s) 1153, 2532
ApeKI GCWGC 3 cut(s) 2178, 2358, 2647
ApoI RAATTY 3 cut(s) 168, 359, 1987
ArsI GACNNNNNNTTYG 6 cut(s) 1341, 1373, 1712, 1744, 2496, 2528
AspLEI GCGC 2 cut(s) 188, 1530
AspS9I GGNCC 1 cut(s) 1793
AsuC2I CCSGG 1 cut(s) 2381
AsuHPI GGTGA 2 cut(s) 86, 2691
AsuII TTCGAA 1 cut(s) 1954
AvaII GGWCC 1 cut(s) 1793
BaeGI GKGCMC 1 cut(s) 312
BamHI GGATCC 1 cut(s) 2340
BanI GGYRCC 2 cut(s) 161, 307
BanII GRGCYC 3 cut(s) 153, 264, 1035
BbrPI CACGTG 1 cut(s) 2326
BbsI GAAGAC 2 cut(s) 75, 1449
Bbv12I GWGCWC 2 cut(s) 153, 264
BbvI GCAGC 3 cut(s) 2190, 2345, 2659
BccI CCATC 6 cut(s) 295, 1335, 1796, 1906, 2072, 2711
BceAI ACGGC 3 cut(s) 606, 1596, 2210
BcgI CGANNNNNNTGC 4 cut(s) 67, 101, 2636, 2670
BciT130I CCWGG 4 cut(s) 275, 424, 1521, 2676
BcnI CCSGG 1 cut(s) 2381
BcoDI GTCTC 6 cut(s) 413, 510, 1016, 1824, 2518, 2673
BfmI CTRYAG 1 cut(s) 2645
BfrI CTTAAG 1 cut(s) 2300
BfuAI ACCTGC 1 cut(s) 2652
BglI GCCNNNNNGGC 1 cut(s) 2355
BglII AGATCT 2 cut(s) 1421, 2554
BisI GCNGC 3 cut(s) 2179, 2359, 2648
BlsI GCNGC 3 cut(s) 2180, 2360, 2649
BmcAI AGTACT 1 cut(s) 559
Bme1390I CCNGG 5 cut(s) 275, 424, 1521, 2381, 2676
Bme18I GGWCC 1 cut(s) 1793
BmgT120I GGNCC 1 cut(s) 1793
BmiI GGNNCC 4 cut(s) 163, 309, 1654, 2342
BmrFI CCNGG 5 cut(s) 275, 424, 1521, 2381, 2676
BmrI ACTGGG 2 cut(s) 1095, 2271
BmsI GCATC 4 cut(s) 1579, 1868, 2416, 2561
BmuI ACTGGG 2 cut(s) 1095, 2271
BpiI GAAGAC 2 cut(s) 75, 1449
BpmI CTGGAG 2 cut(s) 538, 1671
Bpu10I CCTNAGC 2 cut(s) 1146, 1775
Bpu14I TTCGAA 1 cut(s) 1954
BpuEI CTTGAG 4 cut(s) 2081, 2117, 2150, 2489
BpuMI CCSGG 1 cut(s) 2381
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 2326
BsaBI GATNNNNATC 3 cut(s) 539, 1557, 1806
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 3 cut(s) 622, 1520, 2675
BsaWI WCCGGW 1 cut(s) 23
BsaXI ACNNNNNCTCC 2 cut(s) 1644, 1674
Bsc4I CCNNNNNNNGG 3 cut(s) 1248, 1397, 1802
Bse118I RCCGGY 1 cut(s) 1881
Bse1I ACTGG 6 cut(s) 555, 870, 1101, 1207, 1654, 2266
Bse8I GATNNNNATC 3 cut(s) 539, 1557, 1806
BseBI CCWGG 4 cut(s) 275, 424, 1521, 2676
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 3 cut(s) 622, 1520, 2675
BseJI GATNNNNATC 3 cut(s) 539, 1557, 1806
BseLI CCNNNNNNNGG 3 cut(s) 1248, 1397, 1802
BseMII CTCAG 5 cut(s) 44, 1160, 2037, 2296, 2572
BseNI ACTGG 6 cut(s) 555, 870, 1101, 1207, 1654, 2266
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 3 cut(s) 2190, 2345, 2659
BseYI CCCAGC 2 cut(s) 462, 1242
BsgI GTGCAG 3 cut(s) 417, 845, 852
Bsh1236I CGCG 1 cut(s) 472
Bsh1285I CGRYCG 1 cut(s) 2433
BshNI GGYRCC 2 cut(s) 161, 307
BshVI ATCGAT 1 cut(s) 138
BsiEI CGRYCG 1 cut(s) 2433
BsiHKAI GWGCWC 2 cut(s) 153, 264
BsiSI CCGG 4 cut(s) 24, 459, 1882, 2381
BslFI GGGAC 4 cut(s) 479, 1299, 2233, 2457
BslI CCNNNNNNNGG 3 cut(s) 1248, 1397, 1802
BsmAI GTCTC 6 cut(s) 413, 510, 1016, 1824, 2518, 2673
BsmFI GGGAC 4 cut(s) 479, 1299, 2233, 2457
BsmI GAATGC 3 cut(s) 789, 2181, 2319
Bso31I GGTCTC 1 cut(s) 413
Bsp119I TTCGAA 1 cut(s) 1954
Bsp1286I GDGCHC 4 cut(s) 153, 264, 312, 1035
Bsp68I TCGCGA 1 cut(s) 472
BspACI CCGC 7 cut(s) 76, 298, 787, 1498, 1726, 2433, 2494
BspCNI CTCAG 5 cut(s) 45, 1159, 2038, 2295, 2571
BspDI ATCGAT 1 cut(s) 138
BspFNI CGCG 1 cut(s) 472
BspHI TCATGA 1 cut(s) 2397
BspLI GGNNCC 4 cut(s) 163, 309, 1654, 2342
BspMAI CTGCAG 1 cut(s) 2649
BspMI ACCTGC 1 cut(s) 2652
BspPI GGATC 6 cut(s) 323, 594, 1802, 2286, 2335, 2348
BspQI GCTCTTC 3 cut(s) 141, 771, 2127
BspT104I TTCGAA 1 cut(s) 1954
BspT107I GGYRCC 2 cut(s) 161, 307
BspTI CTTAAG 1 cut(s) 2300
BspTNI GGTCTC 1 cut(s) 413
BsrFI RCCGGY 1 cut(s) 1881
BsrI ACTGG 6 cut(s) 555, 870, 1101, 1207, 1654, 2266
BssAI RCCGGY 1 cut(s) 1881
BssECI CCNNGG 3 cut(s) 622, 1520, 2675
BssNAI GTATAC 1 cut(s) 1202
Bst1107I GTATAC 1 cut(s) 1202
Bst2UI CCWGG 4 cut(s) 275, 424, 1521, 2676
Bst4CI ACNGT 4 cut(s) 183, 1376, 2528, 2565
Bst6I CTCTTC 8 cut(s) 141, 244, 771, 2127, 2340, 2523, 2658, 2676
BstAFI CTTAAG 1 cut(s) 2300
BstBAI YACGTR 1 cut(s) 2326
BstBI TTCGAA 1 cut(s) 1954
BstC8I GCNNGC 2 cut(s) 1080, 1883
BstDSI CCRYGG 1 cut(s) 622
BstFNI CGCG 1 cut(s) 472
BstHHI GCGC 2 cut(s) 188, 1530
BstMAI GTCTC 6 cut(s) 413, 510, 1016, 1824, 2518, 2673
BstMCI CGRYCG 1 cut(s) 2433
BstMWI GCNNNNNNNGC 5 cut(s) 1589, 1740, 2355, 2413, 2473
BstNI CCWGG 4 cut(s) 275, 424, 1521, 2676
BstNSI RCATGY 4 cut(s) 1082, 1329, 1462, 1939
BstSCI CCNGG 5 cut(s) 273, 422, 1519, 2379, 2674
BstSFI CTRYAG 1 cut(s) 2645
BstSLI GKGCMC 1 cut(s) 312
BstUI CGCG 1 cut(s) 472
BstV1I GCAGC 3 cut(s) 2190, 2345, 2659
BstV2I GAAGAC 2 cut(s) 75, 1449
BstX2I RGATCY 5 cut(s) 328, 1421, 2278, 2340, 2554
BstYI RGATCY 5 cut(s) 328, 1421, 2278, 2340, 2554
BstZ17I GTATAC 1 cut(s) 1202
Bsu15I ATCGAT 1 cut(s) 138
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 622
BtgZI GCGATG 1 cut(s) 1758
BtsIMutI CAGTG 3 cut(s) 863, 1214, 2259
BtuMI TCGCGA 1 cut(s) 472
BveI ACCTGC 1 cut(s) 2652
Cac8I GCNNGC 2 cut(s) 1080, 1883
CaiI CAGNNNCTG 2 cut(s) 1153, 2532
CciI TCATGA 1 cut(s) 2397
CfoI GCGC 2 cut(s) 188, 1530
Cfr10I RCCGGY 1 cut(s) 1881
Cfr13I GGNCC 1 cut(s) 1793
ClaI ATCGAT 1 cut(s) 138
Csp6I GTAC 3 cut(s) 558, 2271, 2543
CviQI GTAC 3 cut(s) 558, 2271, 2543
DraI TTTAAA 2 cut(s) 1044, 2148
Eam1104I CTCTTC 8 cut(s) 141, 244, 771, 2127, 2340, 2523, 2658, 2676
EarI CTCTTC 8 cut(s) 141, 244, 771, 2127, 2340, 2523, 2658, 2676
EciI GGCGGA 1 cut(s) 1487
Ecl136II GAGCTC 2 cut(s) 151, 262
Eco24I GRGCYC 3 cut(s) 153, 264, 1035
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 1793
Eco53kI GAGCTC 2 cut(s) 151, 262
Eco57I CTGAAG 2 cut(s) 165, 1069
Eco72I CACGTG 1 cut(s) 2326
EcoICRI GAGCTC 2 cut(s) 151, 262
EcoRII CCWGG 4 cut(s) 273, 422, 1519, 2674
EcoT22I ATGCAT 2 cut(s) 1464, 1643
EcoT38I GRGCYC 3 cut(s) 153, 264, 1035
FalI AAGNNNNNCTT 6 cut(s) 879, 911, 924, 956, 1067, 1099
FaqI GGGAC 4 cut(s) 479, 1299, 2233, 2457
FauI CCCGC 2 cut(s) 83, 780
FauNDI CATATG 3 cut(s) 1027, 1037, 2187
FblI GTMKAC 2 cut(s) 1201, 1632
Fnu4HI GCNGC 3 cut(s) 2179, 2359, 2648
FriOI GRGCYC 3 cut(s) 153, 264, 1035
Fsp4HI GCNGC 3 cut(s) 2179, 2359, 2648
GlaI GCGC 2 cut(s) 187, 1529
GluI GCNGC 3 cut(s) 2179, 2359, 2648
GsaI CCCAGC 2 cut(s) 466, 1246
GsuI CTGGAG 2 cut(s) 538, 1671
HapII CCGG 4 cut(s) 24, 459, 1882, 2381
HhaI GCGC 2 cut(s) 188, 1530
Hin6I GCGC 2 cut(s) 186, 1528
HinP1I GCGC 2 cut(s) 186, 1528
HincII GTYRAC 3 cut(s) 193, 1417, 1633
HindII GTYRAC 3 cut(s) 193, 1417, 1633
HpaII CCGG 4 cut(s) 24, 459, 1882, 2381
HphI GGTGA 2 cut(s) 86, 2691
Hpy166II GTNNAC 7 cut(s) 193, 1202, 1417, 1633, 1927, 2093, 2699
Hpy8I GTNNAC 7 cut(s) 193, 1202, 1417, 1633, 1927, 2093, 2699
Hpy99I CGWCG 1 cut(s) 1588
HpyAV CCTTC 9 cut(s) 142, 808, 1093, 1297, 1961, 2340, 2348, 2354, 2395
HpyCH4III ACNGT 4 cut(s) 183, 1376, 2528, 2565
HpyCH4IV ACGT 4 cut(s) 757, 917, 1310, 2325
HpyF10VI GCNNNNNNNGC 5 cut(s) 1589, 1740, 2355, 2413, 2473
HpySE526I ACGT 4 cut(s) 757, 917, 1310, 2325
HspAI GCGC 2 cut(s) 186, 1528
KroI GCCGGC 1 cut(s) 1881
KroNI GCCGGC 1 cut(s) 1883
LguI GCTCTTC 3 cut(s) 141, 771, 2127
LmnI GCTCC 8 cut(s) 1178, 1344, 1542, 1652, 2194, 2404, 2579, 2708
Lsp1109I GCAGC 3 cut(s) 2190, 2345, 2659
LweI GCATC 4 cut(s) 1579, 1868, 2416, 2561
MaeII ACGT 4 cut(s) 757, 917, 1310, 2325
MaeIII GTNAC 5 cut(s) 92, 177, 982, 1357, 1946
MfeI CAATTG 1 cut(s) 2457
MflI RGATCY 5 cut(s) 328, 1421, 2278, 2340, 2554
MhlI GDGCHC 4 cut(s) 153, 264, 312, 1035
MlyI GAGTC 4 cut(s) 461, 1179, 1826, 2299
MmeI TCCRAC 3 cut(s) 396, 559, 628
Mph1103I ATGCAT 2 cut(s) 1464, 1643
MroNI GCCGGC 1 cut(s) 1881
MslI CAYNNNNRTG 3 cut(s) 287, 2186, 2324
MspCI CTTAAG 1 cut(s) 2300
MspI CCGG 4 cut(s) 24, 459, 1882, 2381
MspR9I CCNGG 5 cut(s) 275, 424, 1521, 2381, 2676
MunI CAATTG 1 cut(s) 2457
Mva1269I GAATGC 3 cut(s) 789, 2181, 2319
MvaI CCWGG 4 cut(s) 275, 424, 1521, 2676
MvnI CGCG 1 cut(s) 472
MwoI GCNNNNNNNGC 5 cut(s) 1589, 1740, 2355, 2413, 2473
NaeI GCCGGC 1 cut(s) 1883
NciI CCSGG 1 cut(s) 2381
NdeI CATATG 3 cut(s) 1027, 1037, 2187
NgoMIV GCCGGC 1 cut(s) 1881
NlaIV GGNNCC 4 cut(s) 163, 309, 1654, 2342
NmuCI GTSAC 3 cut(s) 92, 1357, 1946
NruI TCGCGA 1 cut(s) 472
NsiI ATGCAT 2 cut(s) 1464, 1643
NspI RCATGY 4 cut(s) 1082, 1329, 1462, 1939
NspV TTCGAA 1 cut(s) 1954
PaeI GCATGC 1 cut(s) 1082
PagI TCATGA 1 cut(s) 2397
PciSI GCTCTTC 3 cut(s) 141, 771, 2127
PcsI WCGNNNNNNNCGW 1 cut(s) 206
PctI GAATGC 3 cut(s) 789, 2181, 2319
PdiI GCCGGC 1 cut(s) 1883
PfoI TCCNGGA 2 cut(s) 273, 2379
PkrI GCNGC 3 cut(s) 2180, 2360, 2649
PleI GAGTC 4 cut(s) 461, 1178, 1826, 2299
PmaCI CACGTG 1 cut(s) 2326
PmlI CACGTG 1 cut(s) 2326
PpsI GAGTC 4 cut(s) 461, 1178, 1826, 2299
Ppu21I YACGTR 1 cut(s) 2326
Psp124BI GAGCTC 2 cut(s) 153, 264
Psp1406I AACGTT 2 cut(s) 757, 917
Psp6I CCWGG 4 cut(s) 273, 422, 1519, 2674
PspCI CACGTG 1 cut(s) 2326
PspFI CCCAGC 2 cut(s) 462, 1242
PspGI CCWGG 4 cut(s) 273, 422, 1519, 2674
PspN4I GGNNCC 4 cut(s) 163, 309, 1654, 2342
PspPI GGNCC 1 cut(s) 1793
PstI CTGCAG 1 cut(s) 2649
PstNI CAGNNNCTG 2 cut(s) 1153, 2532
PsuI RGATCY 5 cut(s) 328, 1421, 2278, 2340, 2554
RruI TCGCGA 1 cut(s) 472
RsaI GTAC 3 cut(s) 559, 2272, 2544
RsaNI GTAC 3 cut(s) 558, 2271, 2543
RseI CAYNNNNRTG 3 cut(s) 287, 2186, 2324
SacI GAGCTC 2 cut(s) 153, 264
SalI GTCGAC 1 cut(s) 1631
SapI GCTCTTC 3 cut(s) 141, 771, 2127
SatI GCNGC 3 cut(s) 2179, 2359, 2648
Sau96I GGNCC 1 cut(s) 1793
ScaI AGTACT 1 cut(s) 559
SchI GAGTC 4 cut(s) 461, 1179, 1826, 2299
ScrFI CCNGG 5 cut(s) 275, 424, 1521, 2381, 2676
SduI GDGCHC 4 cut(s) 153, 264, 312, 1035
SfaNI GCATC 4 cut(s) 1579, 1868, 2416, 2561
SfcI CTRYAG 1 cut(s) 2645
SfuI TTCGAA 1 cut(s) 1954
SinI GGWCC 1 cut(s) 1793
SmiMI CAYNNNNRTG 3 cut(s) 287, 2186, 2324
SmlI CTYRAG 5 cut(s) 2060, 2096, 2165, 2300, 2468
SmoI CTYRAG 5 cut(s) 2060, 2096, 2165, 2300, 2468
SphI GCATGC 1 cut(s) 1082
SsiI CCGC 7 cut(s) 76, 298, 787, 1498, 1726, 2433, 2494
SspI AATATT 1 cut(s) 2368
SstI GAGCTC 2 cut(s) 153, 264
StyD4I CCNGG 5 cut(s) 273, 422, 1519, 2379, 2674
TaaI ACNGT 4 cut(s) 183, 1376, 2528, 2565
TaiI ACGT 4 cut(s) 760, 920, 1313, 2328
TatI WGTACW 2 cut(s) 557, 2270
TscAI CASTG 3 cut(s) 870, 1214, 2266
TseFI GTSAC 3 cut(s) 92, 1357, 1946
TseI GCWGC 3 cut(s) 2178, 2358, 2647
Tsp45I GTSAC 3 cut(s) 92, 1357, 1946
TspGWI ACGGA 3 cut(s) 1601, 2101, 2207
TspRI CASTG 3 cut(s) 870, 1214, 2266
Vha464I CTTAAG 1 cut(s) 2300
VpaK11BI GGWCC 1 cut(s) 1793
XapI RAATTY 3 cut(s) 168, 359, 1987
XbaI TCTAGA 2 cut(s) 109, 1315
XceI RCATGY 4 cut(s) 1082, 1329, 1462, 1939
XcmI CCANNNNNNNNNTGG 1 cut(s) 862
XmiI GTMKAC 2 cut(s) 1201, 1632
ZrmI AGTACT 1 cut(s) 559
Zsp2I ATGCAT 2 cut(s) 1464, 1643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.