WRKY Transcription Factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 3 - 150 | 9e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 708, 832 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 323, 502 |
| AccII | CGCG | 1 cut(s) | 637 |
| AciI | CCGC | 4 cut(s) | 423, 512, 671, 909 |
| AcoI | YGGCCR | 2 cut(s) | 259, 493 |
| AcsI | RAATTY | 4 cut(s) | 158, 245, 273, 838 |
| AcvI | CACGTG | 1 cut(s) | 654 |
| AdeI | CACNNNGTG | 1 cut(s) | 848 |
| AfaI | GTAC | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 304, 323, 502 |
| AgsI | TTSAA | 4 cut(s) | 37, 118, 163, 364 |
| AhlI | ACTAGT | 1 cut(s) | 413 |
| AjnI | CCWGG | 2 cut(s) | 10, 711 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 190, 222 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 38, 376, 408 |
| AluBI | AGCT | 2 cut(s) | 127, 919 |
| AluI | AGCT | 2 cut(s) | 127, 919 |
| Alw21I | GWGCWC | 1 cut(s) | 172 |
| Alw26I | GTCTC | 1 cut(s) | 759 |
| AoxI | GGCC | 3 cut(s) | 259, 493, 906 |
| ApeKI | GCWGC | 5 cut(s) | 420, 517, 813, 916, 919 |
| ApoI | RAATTY | 4 cut(s) | 158, 245, 273, 838 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 66, 113, 388 |
| AspLEI | GCGC | 1 cut(s) | 566 |
| AspS9I | GGNCC | 3 cut(s) | 210, 580, 906 |
| AsuHPI | GGTGA | 3 cut(s) | 242, 287, 766 |
| AsuII | TTCGAA | 1 cut(s) | 243 |
| AvaII | GGWCC | 2 cut(s) | 210, 580 |
| BalI | TGGCCA | 1 cut(s) | 495 |
| BanI | GGYRCC | 2 cut(s) | 708, 832 |
| BbrPI | CACGTG | 1 cut(s) | 654 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| Bbv12I | GWGCWC | 1 cut(s) | 172 |
| BbvI | GCAGC | 5 cut(s) | 407, 529, 825, 906, 928 |
| BccI | CCATC | 2 cut(s) | 485, 868 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 609, 643 |
| BciT130I | CCWGG | 2 cut(s) | 12, 713 |
| BciVI | GTATCC | 1 cut(s) | 40 |
| BcoDI | GTCTC | 1 cut(s) | 759 |
| BcuI | ACTAGT | 1 cut(s) | 413 |
| BfaI | CTAG | 1 cut(s) | 414 |
| BfmI | CTRYAG | 1 cut(s) | 540 |
| BfuI | GTATCC | 1 cut(s) | 40 |
| BisI | GCNGC | 7 cut(s) | 421, 518, 671, 814, 909, 917, 920 |
| BlsI | GCNGC | 7 cut(s) | 422, 519, 672, 815, 910, 918, 921 |
| BmcAI | AGTACT | 1 cut(s) | 236 |
| Bme1390I | CCNGG | 2 cut(s) | 12, 713 |
| Bme18I | GGWCC | 2 cut(s) | 210, 580 |
| BmgT120I | GGNCC | 3 cut(s) | 210, 580, 906 |
| BmiI | GGNNCC | 4 cut(s) | 385, 582, 710, 834 |
| BmrFI | CCNGG | 2 cut(s) | 12, 713 |
| BmsI | GCATC | 3 cut(s) | 346, 444, 499 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| Bpu14I | TTCGAA | 1 cut(s) | 243 |
| BsaAI | YACGTR | 1 cut(s) | 654 |
| BsaJI | CCNNGG | 1 cut(s) | 317 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 376, 406, 608, 638, 756, 786, 872, 902 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 304, 323, 502 |
| Bse118I | RCCGGY | 1 cut(s) | 261 |
| Bse1I | ACTGG | 2 cut(s) | 385, 933 |
| BseBI | CCWGG | 2 cut(s) | 12, 713 |
| BseDI | CCNNGG | 1 cut(s) | 317 |
| BseGI | GGATG | 3 cut(s) | 59, 86, 514 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 304, 323, 502 |
| BseMII | CTCAG | 1 cut(s) | 728 |
| BseNI | ACTGG | 2 cut(s) | 385, 933 |
| BseRI | GAGGAG | 4 cut(s) | 656, 707, 710, 896 |
| BseX3I | CGGCCG | 1 cut(s) | 259 |
| BseXI | GCAGC | 5 cut(s) | 407, 529, 825, 906, 928 |
| BseYI | CCCAGC | 1 cut(s) | 932 |
| BsgI | GTGCAG | 2 cut(s) | 536, 935 |
| Bsh1236I | CGCG | 1 cut(s) | 637 |
| Bsh1285I | CGRYCG | 1 cut(s) | 262 |
| BshFI | GGCC | 3 cut(s) | 261, 495, 908 |
| BshNI | GGYRCC | 2 cut(s) | 708, 832 |
| BsiEI | CGRYCG | 1 cut(s) | 262 |
| BsiHKAI | GWGCWC | 1 cut(s) | 172 |
| BsiSI | CCGG | 1 cut(s) | 262 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 304, 323, 502 |
| BsmAI | GTCTC | 1 cut(s) | 759 |
| BsmI | GAATGC | 2 cut(s) | 359, 728 |
| BsnI | GGCC | 3 cut(s) | 261, 495, 908 |
| Bsp119I | TTCGAA | 1 cut(s) | 243 |
| Bsp1286I | GDGCHC | 1 cut(s) | 172 |
| Bsp143I | GATC | 2 cut(s) | 292, 823 |
| Bsp19I | CCATGG | 1 cut(s) | 317 |
| BspACI | CCGC | 4 cut(s) | 423, 512, 671, 909 |
| BspANI | GGCC | 3 cut(s) | 261, 495, 908 |
| BspCNI | CTCAG | 1 cut(s) | 729 |
| BspFNI | CGCG | 1 cut(s) | 637 |
| BspHI | TCATGA | 1 cut(s) | 175 |
| BspLI | GGNNCC | 4 cut(s) | 385, 582, 710, 834 |
| BspT104I | TTCGAA | 1 cut(s) | 243 |
| BspT107I | GGYRCC | 2 cut(s) | 708, 832 |
| BsrFI | RCCGGY | 1 cut(s) | 261 |
| BsrI | ACTGG | 2 cut(s) | 385, 933 |
| BssAI | RCCGGY | 1 cut(s) | 261 |
| BssECI | CCNNGG | 1 cut(s) | 317 |
| BssMI | GATC | 2 cut(s) | 292, 823 |
| BssT1I | CCWWGG | 1 cut(s) | 317 |
| Bst2UI | CCWGG | 2 cut(s) | 12, 713 |
| Bst4CI | ACNGT | 2 cut(s) | 281, 821 |
| Bst6I | CTCTTC | 2 cut(s) | 684, 855 |
| BstBAI | YACGTR | 1 cut(s) | 654 |
| BstBI | TTCGAA | 1 cut(s) | 243 |
| BstC8I | GCNNGC | 1 cut(s) | 263 |
| BstDEI | CTNAG | 1 cut(s) | 737 |
| BstDSI | CCRYGG | 1 cut(s) | 317 |
| BstF5I | GGATG | 3 cut(s) | 59, 86, 514 |
| BstFNI | CGCG | 1 cut(s) | 637 |
| BstHHI | GCGC | 1 cut(s) | 566 |
| BstKTI | GATC | 2 cut(s) | 295, 826 |
| BstMAI | GTCTC | 1 cut(s) | 759 |
| BstMBI | GATC | 2 cut(s) | 292, 823 |
| BstMCI | CGRYCG | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 262 |
| BstNI | CCWGG | 2 cut(s) | 12, 713 |
| BstSCI | CCNGG | 2 cut(s) | 10, 711 |
| BstSFI | CTRYAG | 1 cut(s) | 540 |
| BstUI | CGCG | 1 cut(s) | 637 |
| BstV1I | GCAGC | 5 cut(s) | 407, 529, 825, 906, 928 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstZI | CGGCCG | 1 cut(s) | 259 |
| BsuI | GTATCC | 1 cut(s) | 40 |
| BsuRI | GGCC | 3 cut(s) | 261, 495, 908 |
| BtgI | CCRYGG | 1 cut(s) | 317 |
| BtsCI | GGATG | 3 cut(s) | 59, 86, 514 |
| BtsIMutI | CAGTG | 2 cut(s) | 104, 826 |
| Cac8I | GCNNGC | 1 cut(s) | 263 |
| CciI | TCATGA | 1 cut(s) | 175 |
| CfoI | GCGC | 1 cut(s) | 566 |
| Cfr10I | RCCGGY | 1 cut(s) | 261 |
| Cfr13I | GGNCC | 3 cut(s) | 210, 580, 906 |
| Csp6I | GTAC | 1 cut(s) | 235 |
| CviAII | CATG | 5 cut(s) | 176, 227, 304, 318, 485 |
| CviQI | GTAC | 1 cut(s) | 235 |
| DdeI | CTNAG | 1 cut(s) | 737 |
| DpnI | GATC | 2 cut(s) | 294, 825 |
| DpnII | GATC | 2 cut(s) | 292, 823 |
| DraIII | CACNNNGTG | 1 cut(s) | 848 |
| EaeI | YGGCCR | 2 cut(s) | 259, 493 |
| EagI | CGGCCG | 1 cut(s) | 259 |
| Eam1104I | CTCTTC | 2 cut(s) | 684, 855 |
| EarI | CTCTTC | 2 cut(s) | 684, 855 |
| EclXI | CGGCCG | 1 cut(s) | 259 |
| Eco130I | CCWWGG | 1 cut(s) | 317 |
| Eco32I | GATATC | 1 cut(s) | 801 |
| Eco47I | GGWCC | 2 cut(s) | 210, 580 |
| Eco52I | CGGCCG | 1 cut(s) | 259 |
| Eco72I | CACGTG | 1 cut(s) | 654 |
| EcoRII | CCWGG | 2 cut(s) | 10, 711 |
| EcoRV | GATATC | 1 cut(s) | 801 |
| EcoT14I | CCWWGG | 1 cut(s) | 317 |
| EcoT22I | ATGCAT | 2 cut(s) | 149, 361 |
| ErhI | CCWWGG | 1 cut(s) | 317 |
| FaeI | CATG | 5 cut(s) | 179, 230, 307, 321, 488 |
| FatI | CATG | 5 cut(s) | 175, 226, 303, 317, 484 |
| Fnu4HI | GCNGC | 7 cut(s) | 421, 518, 671, 814, 909, 917, 920 |
| FokI | GGATG | 3 cut(s) | 66, 93, 521 |
| Fsp4HI | GCNGC | 7 cut(s) | 421, 518, 671, 814, 909, 917, 920 |
| FspBI | CTAG | 1 cut(s) | 414 |
| GlaI | GCGC | 1 cut(s) | 565 |
| GluI | GCNGC | 7 cut(s) | 421, 518, 671, 814, 909, 917, 920 |
| GsaI | CCCAGC | 1 cut(s) | 936 |
| HaeIII | GGCC | 3 cut(s) | 261, 495, 908 |
| HapII | CCGG | 1 cut(s) | 262 |
| HhaI | GCGC | 1 cut(s) | 566 |
| Hin1II | CATG | 5 cut(s) | 179, 230, 307, 321, 488 |
| Hin6I | GCGC | 1 cut(s) | 564 |
| HinP1I | GCGC | 1 cut(s) | 564 |
| HindIII | AAGCTT | 1 cut(s) | 125 |
| HinfI | GANTC | 6 cut(s) | 287, 623, 632, 771, 780, 884 |
| HpaII | CCGG | 1 cut(s) | 262 |
| HphI | GGTGA | 3 cut(s) | 242, 287, 766 |
| Hpy166II | GTNNAC | 1 cut(s) | 411 |
| Hpy188III | TCNNGA | 6 cut(s) | 26, 44, 176, 324, 364, 446 |
| Hpy8I | GTNNAC | 1 cut(s) | 411 |
| HpyAV | CCTTC | 3 cut(s) | 50, 250, 755 |
| HpyCH4III | ACNGT | 2 cut(s) | 281, 821 |
| HpyCH4IV | ACGT | 1 cut(s) | 653 |
| HpyCH4V | TGCA | 5 cut(s) | 147, 359, 457, 517, 916 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 262 |
| HpyF3I | CTNAG | 1 cut(s) | 737 |
| HpySE526I | ACGT | 1 cut(s) | 653 |
| Hsp92II | CATG | 5 cut(s) | 179, 230, 307, 321, 488 |
| HspAI | GCGC | 1 cut(s) | 564 |
| KroI | GCCGGC | 1 cut(s) | 261 |
| KroNI | GCCGGC | 1 cut(s) | 263 |
| Kzo9I | GATC | 2 cut(s) | 292, 823 |
| Lsp1109I | GCAGC | 5 cut(s) | 407, 529, 825, 906, 928 |
| LweI | GCATC | 3 cut(s) | 346, 444, 499 |
| MaeI | CTAG | 1 cut(s) | 414 |
| MaeII | ACGT | 1 cut(s) | 653 |
| MaeIII | GTNAC | 2 cut(s) | 466, 772 |
| MalI | GATC | 2 cut(s) | 294, 825 |
| MboI | GATC | 2 cut(s) | 292, 823 |
| MboII | GAAGA | 5 cut(s) | 85, 210, 413, 701, 872 |
| MhlI | GDGCHC | 1 cut(s) | 172 |
| MlsI | TGGCCA | 1 cut(s) | 495 |
| MluCI | AATT | 6 cut(s) | 158, 245, 273, 480, 838, 869 |
| MluNI | TGGCCA | 1 cut(s) | 495 |
| MlyI | GAGTC | 5 cut(s) | 296, 632, 641, 780, 893 |
| MmeI | TCCRAC | 4 cut(s) | 419, 567, 594, 870 |
| Mox20I | TGGCCA | 1 cut(s) | 495 |
| Mph1103I | ATGCAT | 2 cut(s) | 149, 361 |
| MroNI | GCCGGC | 1 cut(s) | 261 |
| MroXI | GAANNNNTTC | 3 cut(s) | 66, 113, 388 |
| MscI | TGGCCA | 1 cut(s) | 495 |
| MseI | TTAA | 1 cut(s) | 156 |
| MslI | CAYNNNNRTG | 1 cut(s) | 489 |
| Msp20I | TGGCCA | 1 cut(s) | 495 |
| MspA1I | CMGCKG | 2 cut(s) | 911, 919 |
| MspI | CCGG | 1 cut(s) | 262 |
| MspR9I | CCNGG | 2 cut(s) | 12, 713 |
| Mva1269I | GAATGC | 2 cut(s) | 359, 728 |
| MvaI | CCWGG | 2 cut(s) | 12, 713 |
| MvnI | CGCG | 1 cut(s) | 637 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 262 |
| NaeI | GCCGGC | 1 cut(s) | 263 |
| NcoI | CCATGG | 1 cut(s) | 317 |
| NdeII | GATC | 2 cut(s) | 292, 823 |
| NgoMIV | GCCGGC | 1 cut(s) | 261 |
| NlaIII | CATG | 5 cut(s) | 179, 230, 307, 321, 488 |
| NlaIV | GGNNCC | 4 cut(s) | 385, 582, 710, 834 |
| NmeAIII | GCCGAG | 1 cut(s) | 237 |
| NmuCI | GTSAC | 2 cut(s) | 466, 772 |
| NsiI | ATGCAT | 2 cut(s) | 149, 361 |
| NspV | TTCGAA | 1 cut(s) | 243 |
| PagI | TCATGA | 1 cut(s) | 175 |
| PctI | GAATGC | 2 cut(s) | 359, 728 |
| PdiI | GCCGGC | 1 cut(s) | 263 |
| PdmI | GAANNNNTTC | 3 cut(s) | 66, 113, 388 |
| PfeI | GAWTC | 1 cut(s) | 780 |
| PflFI | GACNNNGTC | 1 cut(s) | 770 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 323, 502 |
| PfoI | TCCNGGA | 1 cut(s) | 10 |
| PkrI | GCNGC | 7 cut(s) | 422, 519, 672, 815, 910, 918, 921 |
| PleI | GAGTC | 5 cut(s) | 295, 631, 640, 779, 892 |
| PmaCI | CACGTG | 1 cut(s) | 654 |
| PmlI | CACGTG | 1 cut(s) | 654 |
| PpsI | GAGTC | 5 cut(s) | 295, 631, 640, 779, 892 |
| Ppu21I | YACGTR | 1 cut(s) | 654 |
| Psp6I | CCWGG | 2 cut(s) | 10, 711 |
| PspCI | CACGTG | 1 cut(s) | 654 |
| PspFI | CCCAGC | 1 cut(s) | 932 |
| PspGI | CCWGG | 2 cut(s) | 10, 711 |
| PspN4I | GGNNCC | 4 cut(s) | 385, 582, 710, 834 |
| PspPI | GGNCC | 3 cut(s) | 210, 580, 906 |
| PsyI | GACNNNGTC | 1 cut(s) | 770 |
| PvuII | CAGCTG | 1 cut(s) | 919 |
| RsaI | GTAC | 1 cut(s) | 236 |
| RsaNI | GTAC | 1 cut(s) | 235 |
| RseI | CAYNNNNRTG | 1 cut(s) | 489 |
| SaqAI | TTAA | 1 cut(s) | 156 |
| SatI | GCNGC | 7 cut(s) | 421, 518, 671, 814, 909, 917, 920 |
| Sau3AI | GATC | 2 cut(s) | 292, 823 |
| Sau96I | GGNCC | 3 cut(s) | 210, 580, 906 |
| ScaI | AGTACT | 1 cut(s) | 236 |
| SchI | GAGTC | 5 cut(s) | 296, 632, 641, 780, 893 |
| ScrFI | CCNGG | 2 cut(s) | 12, 713 |
| SduI | GDGCHC | 1 cut(s) | 172 |
| SetI | ASST | 9 cut(s) | 42, 129, 215, 300, 389, 571, 656, 717, 921 |
| SfaNI | GCATC | 3 cut(s) | 346, 444, 499 |
| SfcI | CTRYAG | 1 cut(s) | 540 |
| SfuI | TTCGAA | 1 cut(s) | 243 |
| SinI | GGWCC | 2 cut(s) | 210, 580 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 489 |
| SpeI | ACTAGT | 1 cut(s) | 413 |
| Sse9I | AATT | 6 cut(s) | 158, 245, 273, 480, 838, 869 |
| SsiI | CCGC | 4 cut(s) | 423, 512, 671, 909 |
| SspMI | CTAG | 1 cut(s) | 414 |
| StyD4I | CCNGG | 2 cut(s) | 10, 711 |
| StyI | CCWWGG | 1 cut(s) | 317 |
| TaaI | ACNGT | 2 cut(s) | 281, 821 |
| TaiI | ACGT | 1 cut(s) | 656 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TaqII | GACCGA | 1 cut(s) | 692 |
| TasI | AATT | 6 cut(s) | 158, 245, 273, 480, 838, 869 |
| TatI | WGTACW | 1 cut(s) | 234 |
| TauI | GCSGC | 2 cut(s) | 673, 911 |
| TfiI | GAWTC | 1 cut(s) | 780 |
| Tru1I | TTAA | 1 cut(s) | 156 |
| Tru9I | TTAA | 1 cut(s) | 156 |
| TscAI | CASTG | 2 cut(s) | 111, 826 |
| TseFI | GTSAC | 2 cut(s) | 466, 772 |
| TseI | GCWGC | 5 cut(s) | 420, 517, 813, 916, 919 |
| Tsp45I | GTSAC | 2 cut(s) | 466, 772 |
| TspDTI | ATGAA | 2 cut(s) | 292, 473 |
| TspGWI | ACGGA | 1 cut(s) | 593 |
| TspRI | CASTG | 2 cut(s) | 111, 826 |
| Tth111I | GACNNNGTC | 1 cut(s) | 770 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 323, 502 |
| VpaK11BI | GGWCC | 2 cut(s) | 210, 580 |
| XapI | RAATTY | 4 cut(s) | 158, 245, 273, 838 |
| XmnI | GAANNNNTTC | 3 cut(s) | 66, 113, 388 |
| XspI | CTAG | 1 cut(s) | 414 |
| ZrmI | AGTACT | 1 cut(s) | 236 |
| Zsp2I | ATGCAT | 2 cut(s) | 149, 361 |