MD07G1260700.v1.1

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000067
Physical Location & Seq
Forward (+)
32648906 .. 32651254
2349 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1260700.v1.1.491

Sequence Viewer

Length: 2250 bp
ATGCCCAATCTTGAGAACCTAATTCTTCGAGATTGTATAAGTTTAGTTGAGGTTCACCTGTCTATTTCAACCCTTACAAAACTTGTGTTATTGAATCTTTTTGGGTGCAAAAAACTTAAGATTCTAGCCAACATCATGCGTATGAAATCTCTCAAAACCCTTGATCTGTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCATGGCTTAGTTTGTCCGGGTCAAAAATTAAAGAATTGCCCTCGTCAATTAATAATCTCACGGGGTTGAGTGATTTGGCCGTAGTAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAACATTCATATGAAATGTCTCAAAACCCTTAATCTTTATGGCTGCTTGAGTCTTGAGATACTTCTAGAGATTTCAGAAGTTATGGAGGAACTATCATTGCTTGATTTGTCCAGATCAAAAATTAAAGAACTGCCTTCGTCAATTAATAATCTCACGGGGTTGAGTGATTTGGTCTTAATAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTCGTATGAAATCTCTCAAAACCCTTAATCTGTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATGGCTTAATTTGTCCGAGTCAAAAATTAAAGAACTGCCCTCGTCAATTAGTAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATTGCAAGGAGCTTCAGAGTCTTCCAAGCAGCATTCGTATGAAATCTCTCAACACCCTTAATCTTTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTGTGGAGAAACTATCATGGCTTAATTTGTCTGAGTCAAAAATTAAAGAACTGCCCTCATCAGTTAGTAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATTGCAAGGAGCTTCAGAGTCTTCCAAGCAGCATTCGTATGAAATCTCTCAACACCCTTAATCTTTCTGGTTGCTTGAGTCTTGAGATATTCCCAGAGATTTCAGAAGTTATGGAGGAACTATCATGGCTTGATTTGTCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGAATCATTTGGTTCTAGTAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTCGTATGAAATCTCTCAATACCCTTAATCTTTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCATGGCTTAATTTGTCCGGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCAAAACCCTTAATCTTTCCGGCTACTTGAGTCTTGAGATATTTCCAGAGATTTCAGAAGTTATGGAGGAACTATCATGGCTTGATTTGTCCAGCATTCGTATGAAATCTCTCAATACCCTTAATCTTTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCATGGCTTAATTTGTCCGGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCAACACCCTTAATCTTTCCGGTTGCTTGAGTCTTGAGATATTCCCAGAGATTTCAGAAGTTATGGAGGAACTATCATGGCTTGATTTGTCCAGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATGGCAAGGAACTTAACAGTCTTCCAAGCAGCATTCGTATGAAATCTCTCAATACCCTTAATCTTTCTGGCTGCTCGAGTCTTGAGATGTTTCCAGAGATTTCAGAAGTTATGGAGAAACTATCATGGCTTAATTTGTCCGGGTCAAAAATTAAAGAACTGCCCTCGTCAATTAATAATCTCACGGGGTTGAATCATTTGGTCCTAGTAGATTGCAAGGAACTTAAGAGTCTTCCAAGCAGCATTTGTATGAAATCTCTCAAAACCCTTAATCTTTCCGGCTGCTTGAGTCTTGAGATATTTCCAGAGATTTCAGAAGTTATGGAGGAACTATCATGGCTTGATTTGTCCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

750

Amino Acids

82.91

Weight (kDa)

5.27

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 20 - 131 3.9e-06 Leucine-rich repeat region
LRR_13 PF23286 49 - 118 3.9e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 189 - 258 1.9e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 259 - 328 3.5e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 329 - 398 7.1e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 399 - 469 8.2e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_EndoS PF23952 428 - 522 1.9e-06 Endo-beta-N-acetylglucosaminidase EndoS LRR domain
LRR_13 PF23286 506 - 575 1.1e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 576 - 645 3.6e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 639 - 743 3.2e-06 Leucine-rich repeat region
LRR_13 PF23286 646 - 727 3.3e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 303
AcuI CTGAAG 2 cut(s) 731, 941
AflII CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
AgsI TTSAA 9 cut(s) 69, 94, 715, 925, 1135, 1345, 1666, 1876, 2086
AjnI CCWGG 3 cut(s) 1082, 1823, 2243
AluBI AGCT 2 cut(s) 745, 955
AluI AGCT 2 cut(s) 745, 955
Alw26I GTCTC 1 cut(s) 365
Ama87I CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
AoxI GGCC 1 cut(s) 303
AseI ATTAAT 7 cut(s) 276, 486, 1116, 1326, 1647, 1857, 2067
AspS9I GGNCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
AsuC2I CCSGG 4 cut(s) 244, 1294, 1615, 2035
AsuHPI GGTGA 1 cut(s) 47
AvaI CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
AvaII GGWCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
BbsI GAAGAC 9 cut(s) 326, 536, 746, 956, 1166, 1376, 1697, 1907, 2117
BccI CCATC 1 cut(s) 1889
BceAI ACGGC 1 cut(s) 290
BciT130I CCWGG 3 cut(s) 1084, 1825, 2245
BcnI CCSGG 4 cut(s) 244, 1294, 1615, 2035
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 9 cut(s) 125, 407, 728, 938, 1148, 1358, 1679, 1889, 2099
BfrI CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
Bme1390I CCNGG 7 cut(s) 244, 1084, 1294, 1615, 1825, 2035, 2245
Bme18I GGWCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
BmeT110I CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
BmgT120I GGNCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
BmrFI CCNGG 7 cut(s) 244, 1084, 1294, 1615, 1825, 2035, 2245
BpiI GAAGAC 9 cut(s) 326, 536, 746, 956, 1166, 1376, 1697, 1907, 2117
BpuMI CCSGG 4 cut(s) 244, 1294, 1615, 2035
BsaWI WCCGGW 1 cut(s) 1751
Bse3DI GCAATG 1 cut(s) 437
BseBI CCWGG 3 cut(s) 1084, 1825, 2245
BseMI GCAATG 1 cut(s) 437
BseMII CTCAG 1 cut(s) 864
BshFI GGCC 1 cut(s) 305
BsiHKCI CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
BsiSI CCGG 7 cut(s) 243, 1293, 1431, 1614, 1752, 2034, 2172
BsmAI GTCTC 1 cut(s) 365
BsmI GAATGC 6 cut(s) 555, 765, 975, 1185, 1506, 1926
BsnI GGCC 1 cut(s) 305
BsoBI CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
Bsp143I GATC 2 cut(s) 163, 455
BspANI GGCC 1 cut(s) 305
BspCNI CTCAG 1 cut(s) 865
BspTI CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
BsrDI GCAATG 1 cut(s) 437
BssMI GATC 2 cut(s) 163, 455
Bst2UI CCWGG 3 cut(s) 1084, 1825, 2245
Bst4CI ACNGT 1 cut(s) 1913
BstAFI CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
BstDEI CTNAG 2 cut(s) 233, 873
BstKTI GATC 2 cut(s) 166, 458
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 2 cut(s) 163, 455
BstNI CCWGG 3 cut(s) 1084, 1825, 2245
BstSCI CCNGG 7 cut(s) 242, 1082, 1292, 1613, 1823, 2033, 2243
BstV2I GAAGAC 9 cut(s) 326, 536, 746, 956, 1166, 1376, 1697, 1907, 2117
BsuRI GGCC 1 cut(s) 305
Cfr13I GGNCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
DdeI CTNAG 2 cut(s) 233, 873
DpnI GATC 2 cut(s) 165, 457
DpnII GATC 2 cut(s) 163, 455
EaeI YGGCCR 1 cut(s) 303
Eco47I GGWCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
Eco57I CTGAAG 2 cut(s) 731, 941
Eco88I CYCGRG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
EcoRII CCWGG 3 cut(s) 1082, 1823, 2243
FauNDI CATATG 1 cut(s) 351
FspBI CTAG 9 cut(s) 125, 407, 728, 938, 1148, 1358, 1679, 1889, 2099
HaeIII GGCC 1 cut(s) 305
HapII CCGG 7 cut(s) 243, 1293, 1431, 1614, 1752, 2034, 2172
HpaII CCGG 7 cut(s) 243, 1293, 1431, 1614, 1752, 2034, 2172
HphI GGTGA 1 cut(s) 47
Hpy166II GTNNAC 1 cut(s) 55
Hpy8I GTNNAC 1 cut(s) 55
HpyAV CCTTC 1 cut(s) 486
HpyCH4III ACNGT 1 cut(s) 1913
HpyCH4V TGCA 9 cut(s) 108, 318, 528, 738, 948, 1158, 1368, 1689, 2109
HpyF3I CTNAG 2 cut(s) 233, 873
Kzo9I GATC 2 cut(s) 163, 455
LmnI GCTCC 2 cut(s) 742, 952
MaeI CTAG 9 cut(s) 125, 407, 728, 938, 1148, 1358, 1679, 1889, 2099
MalI GATC 2 cut(s) 165, 457
MboI GATC 2 cut(s) 163, 455
MspCI CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
MspI CCGG 7 cut(s) 243, 1293, 1431, 1614, 1752, 2034, 2172
MspR9I CCNGG 7 cut(s) 244, 1084, 1294, 1615, 1825, 2035, 2245
Mva1269I GAATGC 6 cut(s) 555, 765, 975, 1185, 1506, 1926
MvaI CCWGG 3 cut(s) 1084, 1825, 2245
NciI CCSGG 4 cut(s) 244, 1294, 1615, 2035
NdeI CATATG 1 cut(s) 351
NdeII GATC 2 cut(s) 163, 455
PaeR7I CTCGAG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
PctI GAATGC 6 cut(s) 555, 765, 975, 1185, 1506, 1926
PfeI GAWTC 9 cut(s) 94, 121, 715, 925, 1135, 1345, 1666, 1876, 2086
PshBI ATTAAT 7 cut(s) 276, 486, 1116, 1326, 1647, 1857, 2067
Psp6I CCWGG 3 cut(s) 1082, 1823, 2243
PspGI CCWGG 3 cut(s) 1082, 1823, 2243
PspPI GGNCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
PspXI VCTCGAGB 6 cut(s) 178, 598, 808, 1228, 1549, 1969
Sau3AI GATC 2 cut(s) 163, 455
Sau96I GGNCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
ScrFI CCNGG 7 cut(s) 244, 1084, 1294, 1615, 1825, 2035, 2245
SetI ASST 8 cut(s) 21, 54, 60, 747, 957, 1088, 1829, 2249
Sfr274I CTCGAG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
SinI GGWCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
SlaI CTCGAG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
SspMI CTAG 9 cut(s) 125, 407, 728, 938, 1148, 1358, 1679, 1889, 2099
StyD4I CCNGG 7 cut(s) 242, 1082, 1292, 1613, 1823, 2033, 2243
TaaI ACNGT 1 cut(s) 1913
TaqI TCGA 7 cut(s) 28, 179, 599, 809, 1229, 1550, 1970
TfiI GAWTC 9 cut(s) 94, 121, 715, 925, 1135, 1345, 1666, 1876, 2086
Vha464I CTTAAG 7 cut(s) 116, 326, 536, 1166, 1376, 1697, 2117
VpaK11BI GGWCC 6 cut(s) 724, 934, 1354, 1675, 1885, 2095
VspI ATTAAT 7 cut(s) 276, 486, 1116, 1326, 1647, 1857, 2067
XbaI TCTAGA 1 cut(s) 406
XhoI CTCGAG 6 cut(s) 178, 598, 808, 1228, 1549, 1969
XspI CTAG 9 cut(s) 125, 407, 728, 938, 1148, 1358, 1679, 1889, 2099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.