RchiOBHm_Chr1g0375931

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000067
Physical Location & Seq
Forward (+)
63220138 .. 63223388
3251 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59961

Sequence Viewer

Length: 1227 bp
ATGAATCGACTTCGTTGTCTAACGCATCTTGAATTGGAAGCTTGTAAGCGACTGAAGTCGGTACCTGAGCTTTCATCGAGTGTAATACGCATAGATGCACATGATTGCACAGCTCTGGAAACAGTTTCAAGACGAAAGACTGATCCAGTATGTAGAATTCTAGACTTCAGGTTTTCTAATTGCTTCCGGCTTCAAGCAAATTTGTTTATAGATATTGTTGAGACTGAGACTTATTCTCTCGACCAGGACAGTCATCTGCGACCTCTGTGGTTCCACATGTGGCTTCCTGGAAGTGAAGTTCCAGAATGGTTCAACCTTCGGGATACAGGATGTTCAGAAACTTTTCGGAAGACAGGATGTTCAGCAACTTTCCAAGCACCACTGAATGGTTTCAATAACAAGCTTTTAGGATTTGCTATATGCATTGTTATTAAATTCAATGGTGCTCGTCATGATGTATCTGATATGTATGGAAGATGTTATTGGACCTCAAAAGGAAAGCATGGTGAGTACTTCTTCGAATTTGATTTGCTCGGCCGGCAGTTCGGAATTTACAGTATAGAGTCAGATCACCTGTTCATGGCATATTTGCCATGGTCTGGATATGGCAGGATTTCACAAGATAGATTAGATGCATTTAAGATTGTAGTAGAAACTGGAACTTATTCTCCGACAGAAGATTGGTTTACTAGTGTCTGCGGTGTTCGTTTAGTTTATGCTCACGACGAGATGCAAAATAGCGTGACACAGCCCATAATTCATGTGGATGGCCAGACAATGGAGGATGCGGTGCAGCAGGGGGAGGGGTGCTGTGCTATAGGAAGGGTGACGGGGCTTGGCGCACCTTTCTTTACGGACCCGTTGGAAATAAGAAAGAGTGAAACAGAGTTGGAGGCAGAGTCATCGGAGTCGCGCGAGGGGAGAGGCACGTGCCAGATATTGGAGCTGTTACCAGAGCCGCAGACTGAGAGAAAAGAAGAGGAGGATGGGGAGGGGTGTCATGTGTTAGGGTCGACATTCTCTTTGAGAAAGAGAGAAACAGAGAGAGAAGGAGACAGAGTCACCAGAGTCTCTGACGAGGGAGAGATATCGGAGTTGGGCAGCCACAGTGGTCTGGTGGTGCCAAATTCACAGAGTGAGGCCAAAGAAGAGAAAGAATTGATGGGGGAGGAGTCGTTGGAGAGGGTTGTTATGGCCGCTGTGCAGCTGCTTTTACTGGCTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

408

Amino Acids

46.15

Weight (kDa)

4.95

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 95 - 242 6.4e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 15
Acc65I GGTACC 1 cut(s) 61
AccB1I GGYRCC 2 cut(s) 61, 1120
AccB7I CCANNNNNTGG 4 cut(s) 386, 599, 778, 940
AccI GTMKAC 1 cut(s) 1013
AccII CGCG 2 cut(s) 913, 915
AciI CCGC 4 cut(s) 699, 788, 959, 1197
AclWI GGATC 1 cut(s) 137
AcoI YGGCCR 3 cut(s) 535, 769, 1194
AcsI RAATTY 6 cut(s) 156, 199, 434, 521, 549, 1126
AcuI CTGAAG 2 cut(s) 74, 151
AcvI CACGTG 1 cut(s) 930
AdeI CACNNNGTG 1 cut(s) 1136
AfaI GTAC 2 cut(s) 63, 512
AfiI CCNNNNNNNGG 5 cut(s) 386, 580, 599, 778, 940
AflIII ACRYGT 1 cut(s) 276
AgsI TTSAA 6 cut(s) 32, 129, 194, 313, 394, 439
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 2 cut(s) 243, 286
AjuI GAANNNNNNNTTGG 2 cut(s) 466, 498
AloI GAACNNNNNNTCC 4 cut(s) 282, 314, 652, 684
AluBI AGCT 6 cut(s) 41, 70, 113, 403, 946, 1207
AluI AGCT 6 cut(s) 41, 70, 113, 403, 946, 1207
Alw21I GWGCWC 1 cut(s) 448
Alw26I GTCTC 4 cut(s) 215, 221, 1047, 1075
AlwI GGATC 1 cut(s) 137
AoxI GGCC 4 cut(s) 535, 769, 1140, 1194
ApeKI GCWGC 4 cut(s) 793, 1101, 1204, 1207
ApoI RAATTY 6 cut(s) 156, 199, 434, 521, 549, 1126
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp700I GAANNNNTTC 3 cut(s) 342, 389, 664
Asp718I GGTACC 1 cut(s) 61
AspLEI GCGC 2 cut(s) 842, 915
AspS9I GGNCC 2 cut(s) 486, 856
AsuHPI GGTGA 4 cut(s) 518, 563, 838, 1054
AsuII TTCGAA 1 cut(s) 519
AvaII GGWCC 2 cut(s) 486, 856
BalI TGGCCA 1 cut(s) 771
BanI GGYRCC 2 cut(s) 61, 1120
BbrPI CACGTG 1 cut(s) 930
BbsI GAAGAC 1 cut(s) 356
Bbv12I GWGCWC 1 cut(s) 448
BbvI GCAGC 4 cut(s) 805, 1113, 1194, 1216
BccI CCATC 3 cut(s) 761, 980, 1156
BcgI CGANNNNNNTGC 2 cut(s) 885, 919
BciT130I CCWGG 2 cut(s) 245, 288
BciVI GTATCC 1 cut(s) 316
BcoDI GTCTC 4 cut(s) 215, 221, 1047, 1075
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 2 cut(s) 161, 690
BfmI CTRYAG 1 cut(s) 816
BfuI GTATCC 1 cut(s) 316
BisI GCNGC 6 cut(s) 794, 959, 1102, 1197, 1205, 1208
BlsI GCNGC 6 cut(s) 795, 960, 1103, 1198, 1206, 1209
BmcAI AGTACT 1 cut(s) 512
Bme1390I CCNGG 2 cut(s) 245, 288
Bme18I GGWCC 2 cut(s) 486, 856
BmgT120I GGNCC 2 cut(s) 486, 856
BmiI GGNNCC 4 cut(s) 63, 272, 858, 1122
BmrFI CCNGG 2 cut(s) 245, 288
BmsI GCATC 5 cut(s) 34, 85, 622, 720, 775
BoxI GACNNNNGTC 1 cut(s) 55
BpiI GAAGAC 1 cut(s) 356
Bpu10I CCTNAGC 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 519
BsaAI YACGTR 1 cut(s) 930
BsaJI CCNNGG 1 cut(s) 593
BsaXI ACNNNNNCTCC 8 cut(s) 652, 682, 884, 914, 1044, 1074, 1160, 1190
Bsc4I CCNNNNNNNGG 5 cut(s) 386, 580, 599, 778, 940
Bse118I RCCGGY 1 cut(s) 537
Bse1I ACTGG 3 cut(s) 146, 661, 1221
BseBI CCWGG 2 cut(s) 245, 288
BseDI CCNNGG 1 cut(s) 593
BseGI GGATG 5 cut(s) 335, 362, 772, 790, 991
BseLI CCNNNNNNNGG 5 cut(s) 386, 580, 599, 778, 940
BseMII CTCAG 3 cut(s) 57, 216, 957
BseNI ACTGG 3 cut(s) 146, 661, 1221
BseRI GAGGAG 2 cut(s) 995, 1184
BseX3I CGGCCG 1 cut(s) 535
BseXI GCAGC 4 cut(s) 805, 1113, 1194, 1216
BseYI CCCAGC 1 cut(s) 1220
BsgI GTGCAG 2 cut(s) 812, 1223
Bsh1236I CGCG 2 cut(s) 913, 915
Bsh1285I CGRYCG 1 cut(s) 538
BshFI GGCC 4 cut(s) 537, 771, 1142, 1196
BshNI GGYRCC 2 cut(s) 61, 1120
BsiEI CGRYCG 1 cut(s) 538
BsiHKAI GWGCWC 1 cut(s) 448
BsiSI CCGG 2 cut(s) 187, 538
BslI CCNNNNNNNGG 5 cut(s) 386, 580, 599, 778, 940
BsmAI GTCTC 4 cut(s) 215, 221, 1047, 1075
BsnI GGCC 4 cut(s) 537, 771, 1142, 1196
Bsp119I TTCGAA 1 cut(s) 519
Bsp1286I GDGCHC 1 cut(s) 448
Bsp143I GATC 2 cut(s) 142, 568
Bsp19I CCATGG 1 cut(s) 593
BspACI CCGC 4 cut(s) 699, 788, 959, 1197
BspANI GGCC 4 cut(s) 537, 771, 1142, 1196
BspCNI CTCAG 3 cut(s) 58, 217, 958
BspFNI CGCG 2 cut(s) 913, 915
BspHI TCATGA 1 cut(s) 451
BspLI GGNNCC 4 cut(s) 63, 272, 858, 1122
BspPI GGATC 1 cut(s) 137
BspT104I TTCGAA 1 cut(s) 519
BspT107I GGYRCC 2 cut(s) 61, 1120
BsrFI RCCGGY 1 cut(s) 537
BsrI ACTGG 3 cut(s) 146, 661, 1221
BssAI RCCGGY 1 cut(s) 537
BssECI CCNNGG 1 cut(s) 593
BssMI GATC 2 cut(s) 142, 568
BssT1I CCWWGG 1 cut(s) 593
Bst2UI CCWGG 2 cut(s) 245, 288
Bst4CI ACNGT 4 cut(s) 124, 251, 557, 1109
Bst6I CTCTTC 2 cut(s) 972, 1143
BstBAI YACGTR 1 cut(s) 930
BstBI TTCGAA 1 cut(s) 519
BstC8I GCNNGC 1 cut(s) 539
BstDEI CTNAG 3 cut(s) 66, 225, 966
BstDSI CCRYGG 1 cut(s) 593
BstF5I GGATG 5 cut(s) 335, 362, 772, 790, 991
BstFNI CGCG 2 cut(s) 913, 915
BstHHI GCGC 2 cut(s) 842, 915
BstKTI GATC 2 cut(s) 145, 571
BstMAI GTCTC 4 cut(s) 215, 221, 1047, 1075
BstMBI GATC 2 cut(s) 142, 568
BstMCI CGRYCG 1 cut(s) 538
BstMWI GCNNNNNNNGC 1 cut(s) 538
BstNI CCWGG 2 cut(s) 245, 288
BstNSI RCATGY 1 cut(s) 280
BstPAI GACNNNNGTC 1 cut(s) 55
BstSCI CCNGG 2 cut(s) 243, 286
BstSFI CTRYAG 1 cut(s) 816
BstUI CGCG 2 cut(s) 913, 915
BstV1I GCAGC 4 cut(s) 805, 1113, 1194, 1216
BstV2I GAAGAC 1 cut(s) 356
BstZI CGGCCG 1 cut(s) 535
BsuI GTATCC 1 cut(s) 316
BsuRI GGCC 4 cut(s) 537, 771, 1142, 1196
BtgI CCRYGG 1 cut(s) 593
BtsCI GGATG 5 cut(s) 335, 362, 772, 790, 991
BtsIMutI CAGTG 2 cut(s) 380, 1114
Cac8I GCNNGC 1 cut(s) 539
CciI TCATGA 1 cut(s) 451
CfoI GCGC 2 cut(s) 842, 915
Cfr10I RCCGGY 1 cut(s) 537
Cfr13I GGNCC 2 cut(s) 486, 856
Csp6I GTAC 2 cut(s) 62, 511
CviAII CATG 8 cut(s) 101, 277, 452, 503, 580, 594, 761, 1001
CviQI GTAC 2 cut(s) 62, 511
DdeI CTNAG 3 cut(s) 66, 225, 966
DpnI GATC 2 cut(s) 144, 570
DpnII GATC 2 cut(s) 142, 568
DraIII CACNNNGTG 1 cut(s) 1136
DrdI GACNNNNNNGTC 1 cut(s) 15
DseDI GACNNNNNNGTC 1 cut(s) 15
EaeI YGGCCR 3 cut(s) 535, 769, 1194
EagI CGGCCG 1 cut(s) 535
Eam1104I CTCTTC 2 cut(s) 972, 1143
EarI CTCTTC 2 cut(s) 972, 1143
EclXI CGGCCG 1 cut(s) 535
Eco130I CCWWGG 1 cut(s) 593
Eco32I GATATC 1 cut(s) 1089
Eco47I GGWCC 2 cut(s) 486, 856
Eco52I CGGCCG 1 cut(s) 535
Eco57I CTGAAG 2 cut(s) 74, 151
Eco72I CACGTG 1 cut(s) 930
EcoRI GAATTC 1 cut(s) 156
EcoRII CCWGG 2 cut(s) 243, 286
EcoRV GATATC 1 cut(s) 1089
EcoT14I CCWWGG 1 cut(s) 593
EcoT22I ATGCAT 2 cut(s) 425, 637
ErhI CCWWGG 1 cut(s) 593
FaeI CATG 8 cut(s) 104, 280, 455, 506, 583, 597, 764, 1004
FatI CATG 8 cut(s) 100, 276, 451, 502, 579, 593, 760, 1000
FblI GTMKAC 1 cut(s) 1013
Fnu4HI GCNGC 6 cut(s) 794, 959, 1102, 1197, 1205, 1208
FokI GGATG 5 cut(s) 342, 369, 779, 797, 998
Fsp4HI GCNGC 6 cut(s) 794, 959, 1102, 1197, 1205, 1208
FspBI CTAG 2 cut(s) 161, 690
GlaI GCGC 2 cut(s) 841, 914
GluI GCNGC 6 cut(s) 794, 959, 1102, 1197, 1205, 1208
GsaI CCCAGC 1 cut(s) 1224
HaeIII GGCC 4 cut(s) 537, 771, 1142, 1196
HapII CCGG 2 cut(s) 187, 538
HhaI GCGC 2 cut(s) 842, 915
Hin1II CATG 8 cut(s) 104, 280, 455, 506, 583, 597, 764, 1004
Hin6I GCGC 2 cut(s) 840, 913
HinP1I GCGC 2 cut(s) 840, 913
HincII GTYRAC 1 cut(s) 1014
HindII GTYRAC 1 cut(s) 1014
HindIII AAGCTT 2 cut(s) 39, 401
HinfI GANTC 7 cut(s) 4, 563, 899, 908, 1059, 1068, 1172
HpaII CCGG 2 cut(s) 187, 538
HphI GGTGA 4 cut(s) 518, 563, 838, 1054
Hpy166II GTNNAC 2 cut(s) 687, 1014
Hpy188I TCNGA 9 cut(s) 337, 348, 463, 548, 568, 672, 907, 1075, 1093
Hpy8I GTNNAC 2 cut(s) 687, 1014
Hpy99I CGWCG 1 cut(s) 728
HpyAV CCTTC 3 cut(s) 326, 816, 1043
HpyCH4III ACNGT 4 cut(s) 124, 251, 557, 1109
HpyCH4IV ACGT 1 cut(s) 929
HpyCH4V TGCA 7 cut(s) 98, 108, 423, 635, 733, 793, 1204
HpyF10VI GCNNNNNNNGC 1 cut(s) 538
HpyF3I CTNAG 3 cut(s) 66, 225, 966
HpySE526I ACGT 1 cut(s) 929
Hsp92II CATG 8 cut(s) 104, 280, 455, 506, 583, 597, 764, 1004
HspAI GCGC 2 cut(s) 840, 913
KpnI GGTACC 1 cut(s) 65
KroI GCCGGC 1 cut(s) 537
KroNI GCCGGC 1 cut(s) 539
Kzo9I GATC 2 cut(s) 142, 568
LmnI GCTCC 1 cut(s) 943
Lsp1109I GCAGC 4 cut(s) 805, 1113, 1194, 1216
LweI GCATC 5 cut(s) 34, 85, 622, 720, 775
MaeI CTAG 2 cut(s) 161, 690
MaeII ACGT 1 cut(s) 929
MaeIII GTNAC 4 cut(s) 742, 826, 948, 1060
MalI GATC 2 cut(s) 144, 570
MboI GATC 2 cut(s) 142, 568
MboII GAAGA 6 cut(s) 361, 486, 508, 689, 989, 1160
MhlI GDGCHC 1 cut(s) 448
MlsI TGGCCA 1 cut(s) 771
MluNI TGGCCA 1 cut(s) 771
MlyI GAGTC 6 cut(s) 572, 908, 917, 1068, 1077, 1181
MmeI TCCRAC 4 cut(s) 695, 843, 870, 1158
Mox20I TGGCCA 1 cut(s) 771
Mph1103I ATGCAT 2 cut(s) 425, 637
MroNI GCCGGC 1 cut(s) 537
MroXI GAANNNNTTC 3 cut(s) 342, 389, 664
MscI TGGCCA 1 cut(s) 771
MseI TTAA 2 cut(s) 432, 639
MslI CAYNNNNRTG 1 cut(s) 765
Msp20I TGGCCA 1 cut(s) 771
MspA1I CMGCKG 2 cut(s) 1199, 1207
MspI CCGG 2 cut(s) 187, 538
MspR9I CCNGG 2 cut(s) 245, 288
MvaI CCWGG 2 cut(s) 245, 288
MvnI CGCG 2 cut(s) 913, 915
MwoI GCNNNNNNNGC 1 cut(s) 538
NaeI GCCGGC 1 cut(s) 539
NcoI CCATGG 1 cut(s) 593
NdeII GATC 2 cut(s) 142, 568
NgoMIV GCCGGC 1 cut(s) 537
NlaIII CATG 8 cut(s) 104, 280, 455, 506, 583, 597, 764, 1004
NlaIV GGNNCC 4 cut(s) 63, 272, 858, 1122
NmeAIII GCCGAG 1 cut(s) 513
NmuCI GTSAC 3 cut(s) 742, 826, 1060
NsiI ATGCAT 2 cut(s) 425, 637
NspI RCATGY 1 cut(s) 280
NspV TTCGAA 1 cut(s) 519
PagI TCATGA 1 cut(s) 451
PciI ACATGT 1 cut(s) 276
PdiI GCCGGC 1 cut(s) 539
PdmI GAANNNNTTC 3 cut(s) 342, 389, 664
PfeI GAWTC 1 cut(s) 4
PflFI GACNNNGTC 1 cut(s) 1058
PflMI CCANNNNNTGG 4 cut(s) 386, 599, 778, 940
PfoI TCCNGGA 1 cut(s) 286
PkrI GCNGC 6 cut(s) 795, 960, 1103, 1198, 1206, 1209
PleI GAGTC 6 cut(s) 571, 907, 916, 1067, 1076, 1180
PmaCI CACGTG 1 cut(s) 930
PmlI CACGTG 1 cut(s) 930
PpsI GAGTC 6 cut(s) 571, 907, 916, 1067, 1076, 1180
Ppu21I YACGTR 1 cut(s) 930
PscI ACATGT 1 cut(s) 276
PshAI GACNNNNGTC 1 cut(s) 55
Psp6I CCWGG 2 cut(s) 243, 286
PspCI CACGTG 1 cut(s) 930
PspFI CCCAGC 1 cut(s) 1220
PspGI CCWGG 2 cut(s) 243, 286
PspN4I GGNNCC 4 cut(s) 63, 272, 858, 1122
PspPI GGNCC 2 cut(s) 486, 856
PsyI GACNNNGTC 1 cut(s) 1058
PvuII CAGCTG 1 cut(s) 1207
RsaI GTAC 2 cut(s) 63, 512
RsaNI GTAC 2 cut(s) 62, 511
RseI CAYNNNNRTG 1 cut(s) 765
SalI GTCGAC 1 cut(s) 1012
SaqAI TTAA 2 cut(s) 432, 639
SatI GCNGC 6 cut(s) 794, 959, 1102, 1197, 1205, 1208
Sau3AI GATC 2 cut(s) 142, 568
Sau96I GGNCC 2 cut(s) 486, 856
ScaI AGTACT 1 cut(s) 512
SchI GAGTC 6 cut(s) 572, 908, 917, 1068, 1077, 1181
ScrFI CCNGG 2 cut(s) 245, 288
SduI GDGCHC 1 cut(s) 448
SfaNI GCATC 5 cut(s) 34, 85, 622, 720, 775
SfcI CTRYAG 1 cut(s) 816
SfuI TTCGAA 1 cut(s) 519
SinI GGWCC 2 cut(s) 486, 856
SmiMI CAYNNNNRTG 1 cut(s) 765
SpeI ACTAGT 1 cut(s) 689
SsiI CCGC 4 cut(s) 699, 788, 959, 1197
SspMI CTAG 2 cut(s) 161, 690
StyD4I CCNGG 2 cut(s) 243, 286
StyI CCWWGG 1 cut(s) 593
TaaI ACNGT 4 cut(s) 124, 251, 557, 1109
TaiI ACGT 1 cut(s) 932
TaqI TCGA 5 cut(s) 7, 77, 240, 519, 1013
TatI WGTACW 1 cut(s) 510
TauI GCSGC 2 cut(s) 961, 1199
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 2 cut(s) 432, 639
Tru9I TTAA 2 cut(s) 432, 639
TscAI CASTG 2 cut(s) 387, 1114
TseFI GTSAC 3 cut(s) 742, 826, 1060
TseI GCWGC 4 cut(s) 793, 1101, 1204, 1207
Tsp45I GTSAC 3 cut(s) 742, 826, 1060
TspDTI ATGAA 4 cut(s) 17, 63, 568, 749
TspGWI ACGGA 1 cut(s) 869
TspRI CASTG 2 cut(s) 387, 1114
Tth111I GACNNNGTC 1 cut(s) 1058
Van91I CCANNNNNTGG 4 cut(s) 386, 599, 778, 940
VpaK11BI GGWCC 2 cut(s) 486, 856
XapI RAATTY 6 cut(s) 156, 199, 434, 521, 549, 1126
XbaI TCTAGA 1 cut(s) 160
XceI RCATGY 1 cut(s) 280
XcmI CCANNNNNNNNNTGG 1 cut(s) 760
XmiI GTMKAC 1 cut(s) 1013
XmnI GAANNNNTTC 3 cut(s) 342, 389, 664
XspI CTAG 2 cut(s) 161, 690
ZrmI AGTACT 1 cut(s) 512
Zsp2I ATGCAT 2 cut(s) 425, 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.