MD17G1208600.v1.1

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000067
Physical Location & Seq
Forward (+)
25162305 .. 25163803
1499 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1208600.v1.1.491

Sequence Viewer

Length: 1338 bp
ATGGATTCCCGCATGCTTGAAATGGACTTGCTATTACATCCTGCTCCTGAAATGGACGACATTCGTGTTGTTGGAATATGGGGTATGGGTGGTATAGGCAAAACCACCATAGCTAGAGCTGTTTATGAGGAAATTGCTTGTCAATTTGAAGCTTGTTGCTTTCTTGACAATGTCAAGGAAGAGTTCTCCGCTTGTGGTGCCGTACATATGCAGGAAAAATTTCTCTCTAGAATCTTGAATGAAAAGGTGCAGAGTTTAGGCACATTGGATCGAGGTTACAGAATGATTTTGAAAAGGCTACAGATGAAAAAGGTTTTGATTGTTCTTGATGATGTTGACGACTTCTTTCAAATTGAAACCTTACTTGGAAAGCAACATTCATTTGGTGGTGGGAGTAGAATCATTATCACCACTAGAGATAAGCTAGTACTAAGTCGAGCTGATGCGATCTACAGCCCCAAGGTTCTAAGTGGTGGTGGAGCTTTGGAGCTCTTTAGCCAGTATGCCTTCAGAACAAAGCAACCCAAAAGAGACTGTGACCATCTCTCAAGCCGTGCTGTACGATATGCTCAAGGTCTCCCTTTAGCACTTAAAGTCTTGGGGGCTTTTCTTTATAACAAATCTGTACAGGAGTGGGGAGAGGTGCTAAAGAAATTAAAGAAAATCCCGCAAAGGGGAATTCATGATGTGCTAAGAACAAGCTTCGATGGACTAGATGATTCTGAGAAGGACATATTTCTGGATATTGCATGTTTCTTTAAAGGAGCCAGAAAAGACTACGCAACAAAGATTCTTGACAGTTGTGGCTTTTATCCCCATACTGGGATAAGAGTTCTAATTGATCGAGCTCTTATAACTGTCTCATCGGAAACACTCGAGATGCATGATTTACTAGAGGAAATGGGTCGGGAAATTGTTCGCCAAGAATCTATTAAAGAGCCTGGGAAACGCAGTAGGGTGTGGAATTATGAAGATGTTCATCATGTGTTAACTCAAAATACGGCTACGGAAGCTGTTGAAAGCATAATCCTTGACCTTTCATTCTCAAAGCTAAAAGTGGTATACTTAAGGTCCGAAGCTTTTGTTAAAATGACGAAATTAAGATTGCTCAAAATCCATGGCGATGGTGTAAATTCATGTGAGAATTTAAAGTTTCTTTCGCATGAGTTAAGAAGTCTCATTTGGAAGTGTTTCCCCCTGAAGTCTTTACCGTCCAATTATATTGCAAAGAATCTTGTTGAGCTTGACATGCAATATAGTCTCATTGAACATCTTTGGGAAGGAGCCAAGGTAAAATCTTCACCTACATATGTTTCTTTTAAATGGTTTAATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

446

Amino Acids

50.73

Weight (kDa)

8.41

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 17 - 173 9.1e-19 NB-ARC domain
WHD_ROQ1 PF23282 241 - 310 7.8e-24 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 411 - 430 1e-05 Leucine Rich Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 615, 854
AccB1I GGYRCC 1 cut(s) 197
AccI GTMKAC 1 cut(s) 1062
AciI CCGC 3 cut(s) 10, 189, 668
AclWI GGATC 1 cut(s) 276
AcsI RAATTY 4 cut(s) 218, 678, 1132, 1144
AcuI CTGAAG 2 cut(s) 493, 1220
AfaI GTAC 4 cut(s) 204, 429, 561, 627
AfiI CCNNNNNNNGG 4 cut(s) 673, 674, 821, 822
AflII CTTAAG 1 cut(s) 1066
AgsI TTSAA 8 cut(s) 20, 149, 238, 292, 350, 356, 1019, 1268
AjnI CCWGG 1 cut(s) 940
AjuI GAANNNNNNNTTGG 4 cut(s) 348, 380, 1165, 1197
Alw21I GWGCWC 2 cut(s) 492, 850
Alw26I GTCTC 5 cut(s) 525, 581, 865, 1181, 1265
AlwI GGATC 1 cut(s) 276
Ama87I CYCGRG 1 cut(s) 875
ApoI RAATTY 4 cut(s) 218, 678, 1132, 1144
Asp700I GAANNNNTTC 4 cut(s) 219, 915, 975, 1190
AspS9I GGNCC 1 cut(s) 1071
AsuHPI GGTGA 2 cut(s) 400, 1293
AvaI CYCGRG 1 cut(s) 875
AvaII GGWCC 1 cut(s) 1071
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 2 cut(s) 492, 850
Bbv12I GWGCWC 2 cut(s) 492, 850
BccI CCATC 3 cut(s) 549, 701, 1118
BceAI ACGGC 3 cut(s) 185, 537, 1017
BciT130I CCWGG 1 cut(s) 942
BcoDI GTCTC 5 cut(s) 525, 581, 865, 1181, 1265
BfaI CTAG 6 cut(s) 114, 228, 414, 425, 713, 893
BfmI CTRYAG 2 cut(s) 299, 451
BfrI CTTAAG 1 cut(s) 1066
BmcAI AGTACT 1 cut(s) 429
Bme1390I CCNGG 1 cut(s) 942
Bme18I GGWCC 1 cut(s) 1071
BmeT110I CYCGRG 1 cut(s) 875
BmgT120I GGNCC 1 cut(s) 1071
BmiI GGNNCC 3 cut(s) 199, 766, 1285
BmrFI CCNGG 1 cut(s) 942
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 2 cut(s) 433, 870
BmuI ACTGGG 1 cut(s) 831
BpuEI CTTGAG 2 cut(s) 532, 555
BsaBI GATNNNNATC 1 cut(s) 978
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 4 cut(s) 459, 941, 1117, 1287
BsaXI ACNNNNNCTCC 2 cut(s) 1275, 1305
Bsc4I CCNNNNNNNGG 4 cut(s) 673, 674, 821, 822
Bse1I ACTGG 2 cut(s) 499, 826
Bse8I GATNNNNATC 1 cut(s) 978
BseBI CCWGG 1 cut(s) 942
BseDI CCNNGG 4 cut(s) 459, 941, 1117, 1287
BseGI GGATG 1 cut(s) 37
BseJI GATNNNNATC 1 cut(s) 978
BseLI CCNNNNNNNGG 4 cut(s) 673, 674, 821, 822
BseMII CTCAG 1 cut(s) 714
BseNI ACTGG 2 cut(s) 499, 826
BsgI GTGCAG 1 cut(s) 269
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 2 cut(s) 492, 850
BsiHKCI CYCGRG 1 cut(s) 875
BslI CCNNNNNNNGG 4 cut(s) 673, 674, 821, 822
BsmAI GTCTC 5 cut(s) 525, 581, 865, 1181, 1265
Bso31I GGTCTC 1 cut(s) 581
BsoBI CYCGRG 1 cut(s) 875
Bsp1286I GDGCHC 2 cut(s) 492, 850
Bsp1407I TGTACA 1 cut(s) 625
Bsp143I GATC 3 cut(s) 268, 447, 841
Bsp19I CCATGG 1 cut(s) 1117
BspACI CCGC 3 cut(s) 10, 189, 668
BspCNI CTCAG 1 cut(s) 715
BspHI TCATGA 1 cut(s) 682
BspLI GGNNCC 3 cut(s) 199, 766, 1285
BspPI GGATC 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 1066
BspTNI GGTCTC 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 625
BsrI ACTGG 2 cut(s) 499, 826
BssECI CCNNGG 4 cut(s) 459, 941, 1117, 1287
BssMI GATC 3 cut(s) 268, 447, 841
BssNAI GTATAC 1 cut(s) 1063
BssT1I CCWWGG 3 cut(s) 459, 1117, 1287
Bst1107I GTATAC 1 cut(s) 1063
Bst2UI CCWGG 1 cut(s) 942
Bst4CI ACNGT 4 cut(s) 536, 800, 859, 1212
Bst6I CTCTTC 1 cut(s) 174
BstAFI CTTAAG 1 cut(s) 1066
BstAUI TGTACA 1 cut(s) 625
BstC8I GCNNGC 1 cut(s) 14
BstDEI CTNAG 5 cut(s) 431, 467, 692, 723, 1335
BstDSI CCRYGG 1 cut(s) 1117
BstF5I GGATG 1 cut(s) 37
BstKTI GATC 3 cut(s) 271, 450, 844
BstMAI GTCTC 5 cut(s) 525, 581, 865, 1181, 1265
BstMBI GATC 3 cut(s) 268, 447, 841
BstMWI GCNNNNNNNGC 3 cut(s) 197, 1010, 1249
BstNI CCWGG 1 cut(s) 942
BstNSI RCATGY 3 cut(s) 16, 753, 1252
BstSCI CCNGG 1 cut(s) 940
BstSFI CTRYAG 2 cut(s) 299, 451
BstXI CCANNNNNNTGG 1 cut(s) 1124
BstZ17I GTATAC 1 cut(s) 1063
BtgI CCRYGG 1 cut(s) 1117
BtgZI GCGATG 1 cut(s) 1137
BtsCI GGATG 1 cut(s) 37
Cac8I GCNNGC 1 cut(s) 14
CciI TCATGA 1 cut(s) 682
Cfr13I GGNCC 1 cut(s) 1071
Csp6I GTAC 4 cut(s) 203, 428, 560, 626
CviAII CATG 9 cut(s) 13, 683, 750, 884, 983, 1118, 1137, 1163, 1249
CviQI GTAC 4 cut(s) 203, 428, 560, 626
DdeI CTNAG 5 cut(s) 431, 467, 692, 723, 1335
DpnI GATC 3 cut(s) 270, 449, 843
DpnII GATC 3 cut(s) 268, 447, 841
DraI TTTAAA 3 cut(s) 760, 1149, 1321
Eam1104I CTCTTC 1 cut(s) 174
EarI CTCTTC 1 cut(s) 174
Ecl136II GAGCTC 2 cut(s) 490, 848
Eco130I CCWWGG 3 cut(s) 459, 1117, 1287
Eco24I GRGCYC 2 cut(s) 492, 850
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 1 cut(s) 1071
Eco53kI GAGCTC 2 cut(s) 490, 848
Eco57I CTGAAG 2 cut(s) 493, 1220
Eco88I CYCGRG 1 cut(s) 875
EcoICRI GAGCTC 2 cut(s) 490, 848
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 1 cut(s) 940
EcoT14I CCWWGG 3 cut(s) 459, 1117, 1287
EcoT22I ATGCAT 1 cut(s) 885
EcoT38I GRGCYC 2 cut(s) 492, 850
ErhI CCWWGG 3 cut(s) 459, 1117, 1287
FaeI CATG 9 cut(s) 16, 686, 753, 887, 986, 1121, 1140, 1166, 1252
FatI CATG 9 cut(s) 12, 682, 749, 883, 982, 1117, 1136, 1162, 1248
FauI CCCGC 2 cut(s) 17, 675
FauNDI CATATG 2 cut(s) 207, 1309
FblI GTMKAC 1 cut(s) 1062
FokI GGATG 1 cut(s) 24
FriOI GRGCYC 2 cut(s) 492, 850
FspBI CTAG 6 cut(s) 114, 228, 414, 425, 713, 893
Hin1II CATG 9 cut(s) 16, 686, 753, 887, 986, 1121, 1140, 1166, 1252
HincII GTYRAC 2 cut(s) 337, 990
HindII GTYRAC 2 cut(s) 337, 990
HindIII AAGCTT 3 cut(s) 150, 700, 1077
HinfI GANTC 7 cut(s) 5, 231, 399, 719, 790, 926, 1231
HpaI GTTAAC 1 cut(s) 990
HphI GGTGA 2 cut(s) 400, 1293
Hpy166II GTNNAC 3 cut(s) 337, 990, 1063
Hpy188I TCNGA 4 cut(s) 512, 724, 868, 1075
Hpy8I GTNNAC 3 cut(s) 337, 990, 1063
HpyAV CCTTC 3 cut(s) 517, 721, 1274
HpyCH4III ACNGT 4 cut(s) 536, 800, 859, 1212
HpyCH4V TGCA 6 cut(s) 211, 250, 749, 883, 1226, 1252
HpyF10VI GCNNNNNNNGC 3 cut(s) 197, 1010, 1249
HpyF3I CTNAG 5 cut(s) 431, 467, 692, 723, 1335
Hsp92II CATG 9 cut(s) 16, 686, 753, 887, 986, 1121, 1140, 1166, 1252
KspAI GTTAAC 1 cut(s) 990
Kzo9I GATC 3 cut(s) 268, 447, 841
LmnI GCTCC 5 cut(s) 49, 479, 487, 764, 1283
LweI GCATC 2 cut(s) 433, 870
MaeI CTAG 6 cut(s) 114, 228, 414, 425, 713, 893
MaeIII GTNAC 2 cut(s) 275, 536
MalI GATC 3 cut(s) 270, 449, 843
MboI GATC 3 cut(s) 268, 447, 841
MboII GAAGA 3 cut(s) 191, 983, 1290
MhlI GDGCHC 2 cut(s) 492, 850
MmeI TCCRAC 1 cut(s) 52
MnlI CCTC 4 cut(s) 121, 266, 634, 889
Mph1103I ATGCAT 1 cut(s) 885
MroXI GAANNNNTTC 4 cut(s) 219, 915, 975, 1190
MslI CAYNNNNRTG 1 cut(s) 1122
MspCI CTTAAG 1 cut(s) 1066
MspR9I CCNGG 1 cut(s) 942
MvaI CCWGG 1 cut(s) 942
MwoI GCNNNNNNNGC 3 cut(s) 197, 1010, 1249
NcoI CCATGG 1 cut(s) 1117
NdeI CATATG 2 cut(s) 207, 1309
NdeII GATC 3 cut(s) 268, 447, 841
NlaIII CATG 9 cut(s) 16, 686, 753, 887, 986, 1121, 1140, 1166, 1252
NlaIV GGNNCC 3 cut(s) 199, 766, 1285
NmuCI GTSAC 1 cut(s) 536
NsiI ATGCAT 1 cut(s) 885
NspI RCATGY 3 cut(s) 16, 753, 1252
PaeI GCATGC 1 cut(s) 16
PaeR7I CTCGAG 1 cut(s) 875
PagI TCATGA 1 cut(s) 682
PdmI GAANNNNTTC 4 cut(s) 219, 915, 975, 1190
PfeI GAWTC 7 cut(s) 5, 231, 399, 719, 790, 926, 1231
PflFI GACNNNGTC 1 cut(s) 170
PsiI TTATAA 2 cut(s) 615, 854
Psp124BI GAGCTC 2 cut(s) 492, 850
Psp6I CCWGG 1 cut(s) 940
PspGI CCWGG 1 cut(s) 940
PspN4I GGNNCC 3 cut(s) 199, 766, 1285
PspPI GGNCC 1 cut(s) 1071
PsyI GACNNNGTC 1 cut(s) 170
RsaI GTAC 4 cut(s) 204, 429, 561, 627
RsaNI GTAC 4 cut(s) 203, 428, 560, 626
RseI CAYNNNNRTG 1 cut(s) 1122
SacI GAGCTC 2 cut(s) 492, 850
Sau3AI GATC 3 cut(s) 268, 447, 841
Sau96I GGNCC 1 cut(s) 1071
ScaI AGTACT 1 cut(s) 429
ScrFI CCNGG 1 cut(s) 942
SduI GDGCHC 2 cut(s) 492, 850
SfaNI GCATC 2 cut(s) 433, 870
SfcI CTRYAG 2 cut(s) 299, 451
Sfr274I CTCGAG 1 cut(s) 875
SinI GGWCC 1 cut(s) 1071
SlaI CTCGAG 1 cut(s) 875
SmiMI CAYNNNNRTG 1 cut(s) 1122
SmlI CTYRAG 4 cut(s) 547, 570, 875, 1066
SmoI CTYRAG 4 cut(s) 547, 570, 875, 1066
SphI GCATGC 1 cut(s) 16
SsiI CCGC 3 cut(s) 10, 189, 668
SspMI CTAG 6 cut(s) 114, 228, 414, 425, 713, 893
SstI GAGCTC 2 cut(s) 492, 850
StyD4I CCNGG 1 cut(s) 940
StyI CCWWGG 3 cut(s) 459, 1117, 1287
TaaI ACNGT 4 cut(s) 536, 800, 859, 1212
TaqI TCGA 5 cut(s) 271, 436, 705, 844, 876
TatI WGTACW 2 cut(s) 427, 625
TfiI GAWTC 7 cut(s) 5, 231, 399, 719, 790, 926, 1231
TseFI GTSAC 1 cut(s) 536
Tsp45I GTSAC 1 cut(s) 536
TspDTI ATGAA 8 cut(s) 255, 320, 369, 671, 968, 984, 1029, 1125
TspGWI ACGGA 1 cut(s) 1022
Tth111I GACNNNGTC 1 cut(s) 170
Vha464I CTTAAG 1 cut(s) 1066
VpaK11BI GGWCC 1 cut(s) 1071
XapI RAATTY 4 cut(s) 218, 678, 1132, 1144
XbaI TCTAGA 1 cut(s) 227
XceI RCATGY 3 cut(s) 16, 753, 1252
XhoI CTCGAG 1 cut(s) 875
XmiI GTMKAC 1 cut(s) 1062
XmnI GAANNNNTTC 4 cut(s) 219, 915, 975, 1190
XspI CTAG 6 cut(s) 114, 228, 414, 425, 713, 893
ZrmI AGTACT 1 cut(s) 429
Zsp2I ATGCAT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.