TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 190 | 2.5e-49 | TIR domain |
| TIR_2 | PF13676 | 16 - 111 | 2.8e-15 | TIR domain |
| NB-ARC | PF00931 | 196 - 362 | 4.9e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 433 - 504 | 3.4e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 734 - 880 | 8.7e-21 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 977, 1551 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2903 |
| Acc36I | ACCTGC | 1 cut(s) | 1915 |
| AccB1I | GGYRCC | 2 cut(s) | 307, 1717 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| AccI | GTMKAC | 2 cut(s) | 1500, 1996 |
| AccII | CGCG | 1 cut(s) | 2900 |
| AccIII | TCCGGA | 1 cut(s) | 1880 |
| AciI | CCGC | 3 cut(s) | 2329, 2616, 2900 |
| AclWI | GGATC | 6 cut(s) | 323, 336, 535, 831, 2612, 2661 |
| AcoI | YGGCCR | 2 cut(s) | 3, 1733 |
| AcsI | RAATTY | 5 cut(s) | 807, 882, 1007, 1603, 2482 |
| AcuI | CTGAAG | 2 cut(s) | 833, 1536 |
| AcyI | GRCGYC | 1 cut(s) | 1718 |
| AfaI | GTAC | 8 cut(s) | 780, 1194, 1269, 1453, 1595, 2060, 2374, 2815 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 953, 1400, 2538 |
| AflIII | ACRYGT | 1 cut(s) | 74 |
| AjiI | CACGTC | 1 cut(s) | 1242 |
| AjnI | CCWGG | 2 cut(s) | 1923, 2203 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 918, 950 |
| AleI | CACNNNNGTG | 1 cut(s) | 79 |
| Alw21I | GWGCWC | 1 cut(s) | 2774 |
| Alw26I | GTCTC | 7 cut(s) | 1248, 1391, 1444, 1957, 2027, 2868, 2911 |
| AlwI | GGATC | 6 cut(s) | 323, 336, 535, 831, 2612, 2661 |
| Ama87I | CYCGRG | 2 cut(s) | 199, 1394 |
| Aor13HI | TCCGGA | 1 cut(s) | 1880 |
| AoxI | GGCC | 4 cut(s) | 3, 1733, 2529, 2780 |
| ApaI | GGGCCC | 1 cut(s) | 2784 |
| ApeKI | GCWGC | 5 cut(s) | 510, 1910, 2336, 2790, 2793 |
| ApoI | RAATTY | 5 cut(s) | 807, 882, 1007, 1603, 2482 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1340, 1344, 1372, 1376 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 583, 795 |
| AspLEI | GCGC | 2 cut(s) | 1720, 2315 |
| AspS9I | GGNCC | 4 cut(s) | 265, 2180, 2780, 2781 |
| AsuHPI | GGTGA | 2 cut(s) | 543, 2116 |
| AvaI | CYCGRG | 2 cut(s) | 199, 1394 |
| AvaII | GGWCC | 2 cut(s) | 265, 2180 |
| BaeGI | GKGCMC | 2 cut(s) | 312, 2784 |
| BalI | TGGCCA | 1 cut(s) | 1735 |
| BamHI | GGATCC | 1 cut(s) | 328 |
| BanI | GGYRCC | 2 cut(s) | 307, 1717 |
| BanII | GRGCYC | 2 cut(s) | 1026, 2784 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2233, 2265 |
| BauI | CACGAG | 1 cut(s) | 1729 |
| BbsI | GAAGAC | 4 cut(s) | 75, 528, 1136, 2241 |
| Bbv12I | GWGCWC | 1 cut(s) | 2774 |
| BbvCI | CCTCAGC | 1 cut(s) | 2064 |
| BbvI | GCAGC | 5 cut(s) | 522, 1922, 2323, 2777, 2780 |
| BceAI | ACGGC | 3 cut(s) | 1731, 1834, 1955 |
| BciT130I | CCWGG | 2 cut(s) | 1925, 2205 |
| BcoDI | GTCTC | 7 cut(s) | 1248, 1391, 1444, 1957, 2027, 2868, 2911 |
| BfmI | CTRYAG | 2 cut(s) | 1457, 1908 |
| BfoI | RGCGCY | 1 cut(s) | 1721 |
| BfuAI | ACCTGC | 1 cut(s) | 1915 |
| BglII | AGATCT | 4 cut(s) | 148, 270, 1424, 1519 |
| BisI | GCNGC | 5 cut(s) | 511, 1911, 2337, 2791, 2794 |
| BlsI | GCNGC | 5 cut(s) | 512, 1912, 2338, 2792, 2795 |
| BmcAI | AGTACT | 1 cut(s) | 1595 |
| Bme1390I | CCNGG | 2 cut(s) | 1925, 2205 |
| Bme18I | GGWCC | 2 cut(s) | 265, 2180 |
| BmeT110I | CYCGRG | 2 cut(s) | 199, 1394 |
| BmgBI | CACGTC | 1 cut(s) | 1242 |
| BmgT120I | GGNCC | 4 cut(s) | 265, 2180, 2780, 2781 |
| BmiI | GGNNCC | 5 cut(s) | 309, 330, 1719, 1745, 2782 |
| BmrFI | CCNGG | 2 cut(s) | 1925, 2205 |
| BmsI | GCATC | 5 cut(s) | 245, 675, 1096, 1452, 1999 |
| BpiI | GAAGAC | 4 cut(s) | 75, 528, 1136, 2241 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2756, 2788 |
| BpmI | CTGGAG | 3 cut(s) | 45, 1793, 2892 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2064, 2773 |
| BpuEI | CTTGAG | 3 cut(s) | 371, 758, 1099 |
| Bsa29I | ATCGAT | 1 cut(s) | 2007 |
| BsaAI | YACGTR | 1 cut(s) | 77 |
| BsaHI | GRCGYC | 1 cut(s) | 1718 |
| BsaJI | CCNNGG | 3 cut(s) | 1924, 2526, 2646 |
| BsaWI | WCCGGW | 1 cut(s) | 1880 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1627, 1657, 2850, 2880 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 274, 304, 953, 1400, 2538 |
| Bse118I | RCCGGY | 1 cut(s) | 5 |
| Bse1I | ACTGG | 6 cut(s) | 267, 432, 450, 1405, 2282, 2443 |
| Bse3DI | GCAATG | 3 cut(s) | 1821, 1845, 1920 |
| BseAI | TCCGGA | 1 cut(s) | 1880 |
| BseBI | CCWGG | 2 cut(s) | 1925, 2205 |
| BseCI | ATCGAT | 1 cut(s) | 2007 |
| BseDI | CCNNGG | 3 cut(s) | 1924, 2526, 2646 |
| BseGI | GGATG | 7 cut(s) | 292, 496, 634, 844, 1706, 2565, 2908 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 953, 1400, 2538 |
| BseMI | GCAATG | 3 cut(s) | 1821, 1845, 1920 |
| BseMII | CTCAG | 6 cut(s) | 1316, 1581, 1940, 2055, 2787, 2922 |
| BseNI | ACTGG | 6 cut(s) | 267, 432, 450, 1405, 2282, 2443 |
| BseRI | GAGGAG | 2 cut(s) | 2780, 2915 |
| BseSI | GKGCMC | 2 cut(s) | 312, 2784 |
| BseXI | GCAGC | 5 cut(s) | 522, 1922, 2323, 2777, 2780 |
| BseYI | CCCAGC | 3 cut(s) | 462, 498, 2470 |
| BsgI | GTGCAG | 4 cut(s) | 795, 899, 1143, 2771 |
| Bsh1236I | CGCG | 1 cut(s) | 2900 |
| BshFI | GGCC | 4 cut(s) | 5, 1735, 2531, 2782 |
| BshNI | GGYRCC | 2 cut(s) | 307, 1717 |
| BshVI | ATCGAT | 1 cut(s) | 2007 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2774 |
| BsiHKCI | CYCGRG | 2 cut(s) | 199, 1394 |
| BsiSI | CCGG | 2 cut(s) | 6, 1881 |
| BsiWI | CGTACG | 1 cut(s) | 2058 |
| BslFI | GGGAC | 2 cut(s) | 1505, 2934 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 274, 304, 953, 1400, 2538 |
| BsmAI | GTCTC | 7 cut(s) | 1248, 1391, 1444, 1957, 2027, 2868, 2911 |
| BsmBI | CGTCTC | 1 cut(s) | 1248 |
| BsmFI | GGGAC | 2 cut(s) | 1505, 2934 |
| BsmI | GAATGC | 1 cut(s) | 1533 |
| BsnI | GGCC | 4 cut(s) | 5, 1735, 2531, 2782 |
| BsoBI | CYCGRG | 2 cut(s) | 199, 1394 |
| Bsp120I | GGGCCC | 1 cut(s) | 2780 |
| Bsp1286I | GDGCHC | 4 cut(s) | 312, 1026, 2774, 2784 |
| Bsp13I | TCCGGA | 1 cut(s) | 1880 |
| Bsp1407I | TGTACA | 1 cut(s) | 2813 |
| BspACI | CCGC | 3 cut(s) | 2329, 2616, 2900 |
| BspANI | GGCC | 4 cut(s) | 5, 1735, 2531, 2782 |
| BspCNI | CTCAG | 6 cut(s) | 1315, 1582, 1941, 2056, 2786, 2921 |
| BspDI | ATCGAT | 1 cut(s) | 2007 |
| BspEI | TCCGGA | 1 cut(s) | 1880 |
| BspFNI | CGCG | 1 cut(s) | 2900 |
| BspHI | TCATGA | 1 cut(s) | 1372 |
| BspLI | GGNNCC | 5 cut(s) | 309, 330, 1719, 1745, 2782 |
| BspMAI | CTGCAG | 1 cut(s) | 1912 |
| BspMI | ACCTGC | 1 cut(s) | 1915 |
| BspPI | GGATC | 6 cut(s) | 323, 336, 535, 831, 2612, 2661 |
| BspT107I | GGYRCC | 2 cut(s) | 307, 1717 |
| BsrDI | GCAATG | 3 cut(s) | 1821, 1845, 1920 |
| BsrFI | RCCGGY | 1 cut(s) | 5 |
| BsrGI | TGTACA | 1 cut(s) | 2813 |
| BsrI | ACTGG | 6 cut(s) | 267, 432, 450, 1405, 2282, 2443 |
| BssAI | RCCGGY | 1 cut(s) | 5 |
| BssECI | CCNNGG | 3 cut(s) | 1924, 2526, 2646 |
| BssNAI | GTATAC | 1 cut(s) | 1997 |
| BssNI | GRCGYC | 1 cut(s) | 1718 |
| BssSI | CACGAG | 1 cut(s) | 1729 |
| Bst1107I | GTATAC | 1 cut(s) | 1997 |
| Bst2BI | CACGAG | 1 cut(s) | 1729 |
| Bst2UI | CCWGG | 2 cut(s) | 1925, 2205 |
| Bst4CI | ACNGT | 5 cut(s) | 618, 1192, 1438, 2038, 2260 |
| Bst6I | CTCTTC | 3 cut(s) | 405, 2205, 2751 |
| BstACI | GRCGYC | 1 cut(s) | 1718 |
| BstAUI | TGTACA | 1 cut(s) | 2813 |
| BstBAI | YACGTR | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 4 cut(s) | 1122, 1279, 2444, 2551 |
| BstDEI | CTNAG | 9 cut(s) | 152, 1302, 1590, 1597, 1949, 2064, 2377, 2773, 2908 |
| BstEII | GGTNACC | 1 cut(s) | 2104 |
| BstF5I | GGATG | 7 cut(s) | 292, 496, 634, 844, 1706, 2565, 2908 |
| BstFNI | CGCG | 1 cut(s) | 2900 |
| BstH2I | RGCGCY | 1 cut(s) | 1721 |
| BstHHI | GCGC | 2 cut(s) | 1720, 2315 |
| BstMAI | GTCTC | 7 cut(s) | 1248, 1391, 1444, 1957, 2027, 2868, 2911 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2312 |
| BstNI | CCWGG | 2 cut(s) | 1925, 2205 |
| BstNSI | RCATGY | 2 cut(s) | 1332, 2446 |
| BstPI | GGTNACC | 1 cut(s) | 2104 |
| BstSCI | CCNGG | 2 cut(s) | 1923, 2203 |
| BstSFI | CTRYAG | 2 cut(s) | 1457, 1908 |
| BstSLI | GKGCMC | 2 cut(s) | 312, 2784 |
| BstUI | CGCG | 1 cut(s) | 2900 |
| BstV1I | GCAGC | 5 cut(s) | 522, 1922, 2323, 2777, 2780 |
| BstV2I | GAAGAC | 4 cut(s) | 75, 528, 1136, 2241 |
| BstX2I | RGATCY | 6 cut(s) | 148, 270, 328, 1424, 1519, 2653 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2277 |
| BstYI | RGATCY | 6 cut(s) | 148, 270, 328, 1424, 1519, 2653 |
| BstZ17I | GTATAC | 1 cut(s) | 1997 |
| Bsu15I | ATCGAT | 1 cut(s) | 2007 |
| BsuRI | GGCC | 4 cut(s) | 5, 1735, 2531, 2782 |
| BsuTUI | ATCGAT | 1 cut(s) | 2007 |
| BtrI | CACGTC | 1 cut(s) | 1242 |
| BtsCI | GGATG | 7 cut(s) | 292, 496, 634, 844, 1706, 2565, 2908 |
| BveI | ACCTGC | 1 cut(s) | 1915 |
| Cac8I | GCNNGC | 4 cut(s) | 1122, 1279, 2444, 2551 |
| CciI | TCATGA | 1 cut(s) | 1372 |
| CfoI | GCGC | 2 cut(s) | 1720, 2315 |
| Cfr10I | RCCGGY | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 4 cut(s) | 265, 2180, 2780, 2781 |
| ClaI | ATCGAT | 1 cut(s) | 2007 |
| CseI | GACGC | 1 cut(s) | 2906 |
| Csp6I | GTAC | 8 cut(s) | 779, 1193, 1268, 1452, 1594, 2059, 2373, 2814 |
| CviQI | GTAC | 8 cut(s) | 779, 1193, 1268, 1452, 1594, 2059, 2373, 2814 |
| DdeI | CTNAG | 9 cut(s) | 152, 1302, 1590, 1597, 1949, 2064, 2377, 2773, 2908 |
| DinI | GGCGCC | 1 cut(s) | 1719 |
| DraI | TTTAAA | 2 cut(s) | 531, 1339 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2903 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2903 |
| EaeI | YGGCCR | 2 cut(s) | 3, 1733 |
| Eam1104I | CTCTTC | 3 cut(s) | 405, 2205, 2751 |
| EarI | CTCTTC | 3 cut(s) | 405, 2205, 2751 |
| Eco24I | GRGCYC | 2 cut(s) | 1026, 2784 |
| Eco47I | GGWCC | 2 cut(s) | 265, 2180 |
| Eco57I | CTGAAG | 2 cut(s) | 833, 1536 |
| Eco88I | CYCGRG | 2 cut(s) | 199, 1394 |
| Eco91I | GGTNACC | 1 cut(s) | 2104 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2780 |
| EcoO65I | GGTNACC | 1 cut(s) | 2104 |
| EcoRII | CCWGG | 2 cut(s) | 1923, 2203 |
| EcoT22I | ATGCAT | 1 cut(s) | 1467 |
| EcoT38I | GRGCYC | 2 cut(s) | 1026, 2784 |
| EgeI | GGCGCC | 1 cut(s) | 1719 |
| EheI | GGCGCC | 1 cut(s) | 1719 |
| Esp3I | CGTCTC | 1 cut(s) | 1248 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 740, 772 |
| FaqI | GGGAC | 2 cut(s) | 1505, 2934 |
| FauI | CCCGC | 2 cut(s) | 2322, 2609 |
| FauNDI | CATATG | 2 cut(s) | 2463, 2786 |
| FblI | GTMKAC | 2 cut(s) | 1500, 1996 |
| Fnu4HI | GCNGC | 5 cut(s) | 511, 1911, 2337, 2791, 2794 |
| FokI | GGATG | 7 cut(s) | 299, 503, 641, 851, 1713, 2552, 2915 |
| FriOI | GRGCYC | 2 cut(s) | 1026, 2784 |
| Fsp4HI | GCNGC | 5 cut(s) | 511, 1911, 2337, 2791, 2794 |
| GlaI | GCGC | 2 cut(s) | 1719, 2314 |
| GluI | GCNGC | 5 cut(s) | 511, 1911, 2337, 2791, 2794 |
| GsaI | CCCAGC | 3 cut(s) | 466, 502, 2474 |
| GsuI | CTGGAG | 3 cut(s) | 45, 1793, 2892 |
| HaeII | RGCGCY | 1 cut(s) | 1721 |
| HaeIII | GGCC | 4 cut(s) | 5, 1735, 2531, 2782 |
| HapII | CCGG | 2 cut(s) | 6, 1881 |
| HgaI | GACGC | 1 cut(s) | 2906 |
| HhaI | GCGC | 2 cut(s) | 1720, 2315 |
| Hin1I | GRCGYC | 1 cut(s) | 1718 |
| Hin6I | GCGC | 2 cut(s) | 1718, 2313 |
| HinP1I | GCGC | 2 cut(s) | 1718, 2313 |
| HincII | GTYRAC | 2 cut(s) | 678, 1183 |
| HindII | GTYRAC | 2 cut(s) | 678, 1183 |
| HindIII | AAGCTT | 1 cut(s) | 369 |
| HpaI | GTTAAC | 1 cut(s) | 1183 |
| HpaII | CCGG | 2 cut(s) | 6, 1881 |
| HphI | GGTGA | 2 cut(s) | 543, 2116 |
| Hpy99I | CGWCG | 3 cut(s) | 22, 47, 167 |
| HpyAV | CCTTC | 4 cut(s) | 142, 742, 808, 2909 |
| HpyCH4III | ACNGT | 5 cut(s) | 618, 1192, 1438, 2038, 2260 |
| HpyCH4IV | ACGT | 4 cut(s) | 45, 76, 1241, 1583 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2312 |
| HpyF3I | CTNAG | 9 cut(s) | 152, 1302, 1590, 1597, 1949, 2064, 2377, 2773, 2908 |
| HpySE526I | ACGT | 4 cut(s) | 45, 76, 1241, 1583 |
| Hsp92I | GRCGYC | 1 cut(s) | 1718 |
| HspAI | GCGC | 2 cut(s) | 1718, 2313 |
| KasI | GGCGCC | 1 cut(s) | 1717 |
| Kpn2I | TCCGGA | 1 cut(s) | 1880 |
| KspAI | GTTAAC | 1 cut(s) | 1183 |
| LmnI | GCTCC | 3 cut(s) | 175, 963, 1169 |
| Lsp1109I | GCAGC | 5 cut(s) | 522, 1922, 2323, 2777, 2780 |
| LweI | GCATC | 5 cut(s) | 245, 675, 1096, 1452, 1999 |
| MaeII | ACGT | 4 cut(s) | 45, 76, 1241, 1583 |
| MaeIII | GTNAC | 8 cut(s) | 996, 1100, 1360, 1432, 1790, 2104, 2254, 2321 |
| MflI | RGATCY | 6 cut(s) | 148, 270, 328, 1424, 1519, 2653 |
| MhlI | GDGCHC | 4 cut(s) | 312, 1026, 2774, 2784 |
| MlsI | TGGCCA | 1 cut(s) | 1735 |
| MluNI | TGGCCA | 1 cut(s) | 1735 |
| Mly113I | GGCGCC | 1 cut(s) | 1718 |
| MlyI | GAGTC | 5 cut(s) | 191, 1786, 2571, 2897, 2916 |
| MmeI | TCCRAC | 4 cut(s) | 396, 625, 1194, 1875 |
| Mox20I | TGGCCA | 1 cut(s) | 1735 |
| Mph1103I | ATGCAT | 1 cut(s) | 1467 |
| MroI | TCCGGA | 1 cut(s) | 1880 |
| MroXI | GAANNNNTTC | 2 cut(s) | 583, 795 |
| MscI | TGGCCA | 1 cut(s) | 1735 |
| MslI | CAYNNNNRTG | 3 cut(s) | 79, 717, 1690 |
| Msp20I | TGGCCA | 1 cut(s) | 1735 |
| MspI | CCGG | 2 cut(s) | 6, 1881 |
| MspR9I | CCNGG | 2 cut(s) | 1925, 2205 |
| Mva1269I | GAATGC | 1 cut(s) | 1533 |
| MvaI | CCWGG | 2 cut(s) | 1925, 2205 |
| MvnI | CGCG | 1 cut(s) | 2900 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2312 |
| NarI | GGCGCC | 1 cut(s) | 1718 |
| NdeI | CATATG | 2 cut(s) | 2463, 2786 |
| NlaIV | GGNNCC | 5 cut(s) | 309, 330, 1719, 1745, 2782 |
| NmuCI | GTSAC | 3 cut(s) | 1360, 1790, 2104 |
| NsiI | ATGCAT | 1 cut(s) | 1467 |
| NspI | RCATGY | 2 cut(s) | 1332, 2446 |
| OliI | CACNNNNGTG | 1 cut(s) | 79 |
| PaeI | GCATGC | 1 cut(s) | 2446 |
| PaeR7I | CTCGAG | 1 cut(s) | 199 |
| PagI | TCATGA | 1 cut(s) | 1372 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 206 |
| PctI | GAATGC | 1 cut(s) | 1533 |
| PdmI | GAANNNNTTC | 2 cut(s) | 583, 795 |
| Pfl23II | CGTACG | 1 cut(s) | 2058 |
| PflFI | GACNNNGTC | 1 cut(s) | 1496 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| PfoI | TCCNGGA | 1 cut(s) | 2203 |
| PkrI | GCNGC | 5 cut(s) | 512, 1912, 2338, 2792, 2795 |
| PleI | GAGTC | 5 cut(s) | 191, 1785, 2570, 2896, 2916 |
| PluTI | GGCGCC | 1 cut(s) | 1721 |
| PpsI | GAGTC | 5 cut(s) | 191, 1785, 2570, 2896, 2916 |
| Ppu21I | YACGTR | 1 cut(s) | 77 |
| PsiI | TTATAA | 2 cut(s) | 977, 1551 |
| Psp6I | CCWGG | 2 cut(s) | 1923, 2203 |
| PspEI | GGTNACC | 1 cut(s) | 2104 |
| PspFI | CCCAGC | 3 cut(s) | 462, 498, 2470 |
| PspGI | CCWGG | 2 cut(s) | 1923, 2203 |
| PspLI | CGTACG | 1 cut(s) | 2058 |
| PspN4I | GGNNCC | 5 cut(s) | 309, 330, 1719, 1745, 2782 |
| PspOMI | GGGCCC | 1 cut(s) | 2780 |
| PspPI | GGNCC | 4 cut(s) | 265, 2180, 2780, 2781 |
| PspXI | VCTCGAGB | 1 cut(s) | 199 |
| PstI | CTGCAG | 1 cut(s) | 1912 |
| PsuI | RGATCY | 6 cut(s) | 148, 270, 328, 1424, 1519, 2653 |
| PsyI | GACNNNGTC | 1 cut(s) | 1496 |
| RsaI | GTAC | 8 cut(s) | 780, 1194, 1269, 1453, 1595, 2060, 2374, 2815 |
| RsaNI | GTAC | 8 cut(s) | 779, 1193, 1268, 1452, 1594, 2059, 2373, 2814 |
| RseI | CAYNNNNRTG | 3 cut(s) | 79, 717, 1690 |
| SatI | GCNGC | 5 cut(s) | 511, 1911, 2337, 2791, 2794 |
| Sau96I | GGNCC | 4 cut(s) | 265, 2180, 2780, 2781 |
| ScaI | AGTACT | 1 cut(s) | 1595 |
| SchI | GAGTC | 5 cut(s) | 191, 1786, 2571, 2897, 2916 |
| ScrFI | CCNGG | 2 cut(s) | 1925, 2205 |
| SduI | GDGCHC | 4 cut(s) | 312, 1026, 2774, 2784 |
| SfaNI | GCATC | 5 cut(s) | 245, 675, 1096, 1452, 1999 |
| SfcI | CTRYAG | 2 cut(s) | 1457, 1908 |
| SfoI | GGCGCC | 1 cut(s) | 1719 |
| Sfr274I | CTCGAG | 1 cut(s) | 199 |
| SinI | GGWCC | 2 cut(s) | 265, 2180 |
| SlaI | CTCGAG | 1 cut(s) | 199 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 79, 717, 1690 |
| SmlI | CTYRAG | 4 cut(s) | 199, 350, 737, 1114 |
| SmoI | CTYRAG | 4 cut(s) | 199, 350, 737, 1114 |
| SphI | GCATGC | 1 cut(s) | 2446 |
| SsiI | CCGC | 3 cut(s) | 2329, 2616, 2900 |
| SspDI | GGCGCC | 1 cut(s) | 1717 |
| SspI | AATATT | 2 cut(s) | 1258, 1314 |
| StyD4I | CCNGG | 2 cut(s) | 1923, 2203 |
| TaaI | ACNGT | 5 cut(s) | 618, 1192, 1438, 2038, 2260 |
| TaiI | ACGT | 4 cut(s) | 48, 79, 1244, 1586 |
| TaqI | TCGA | 8 cut(s) | 126, 200, 209, 402, 826, 1991, 2007, 2421 |
| TatI | WGTACW | 4 cut(s) | 778, 1267, 1593, 2813 |
| TseFI | GTSAC | 3 cut(s) | 1360, 1790, 2104 |
| TseI | GCWGC | 5 cut(s) | 510, 1910, 2336, 2790, 2793 |
| Tsp45I | GTSAC | 3 cut(s) | 1360, 1790, 2104 |
| TspGWI | ACGGA | 2 cut(s) | 2046, 2242 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1496 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 274, 304 |
| VpaK11BI | GGWCC | 2 cut(s) | 265, 2180 |
| XapI | RAATTY | 5 cut(s) | 807, 882, 1007, 1603, 2482 |
| XbaI | TCTAGA | 2 cut(s) | 1318, 2428 |
| XceI | RCATGY | 2 cut(s) | 1332, 2446 |
| XhoI | CTCGAG | 1 cut(s) | 199 |
| XmiI | GTMKAC | 2 cut(s) | 1500, 1996 |
| XmnI | GAANNNNTTC | 2 cut(s) | 583, 795 |
| ZrmI | AGTACT | 1 cut(s) | 1595 |
| Zsp2I | ATGCAT | 1 cut(s) | 1467 |