MD02G1260200.v1.1

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
31366383 .. 31368219
1837 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1260200.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGCAGTATGCTTTTAGTAGAAAGCAACCCACAGAAGAATACATTGATCTGTCAGGCCATTTCACAAAATATGCTCAAGGTTTGCCTTTAGCACTCAAAGTCTTGGGAGCATTTCTCGAAAACAAAAGTGAACGTGCGTGGACAGATGAGTTAAAGAAAATAGCCAGAAATCCGAACCCGGGAATCCAGGAAATGCTTAGAACAAGCTTTGATGGACTAGATAGATATCAGAAGGAAATATTTCTTGATATTGCATGTTTCTTTAAACAAATGAAGAAAGACTTTGCAACAAGGATTATGGAGGGTTGTGGCTTCCATCCCCATACCGGATTAGACGTTCTAGTTGGTAGAGCTCTTGTCACTATCTCATCTGATGGTGTACTCGAGATGCATGATTTACTAGAGGAAATGGGTCGCGAAATCGTACGCGAGAAATCTATAGAAGAGCCTGGGAGTTGCAGTAGGTTGTGGAGCGATGAAGATGTCCGTCATGTGTTAACTAAAAAAACGGCTACTGAAGCAGTTGAAAGCATAATTGTGCATTGGCCACACTCAGACAATGTGGTGGAATTAGATACCGCTTTTCTTAAAATGACAAAACTAAGGCTACTCAGAGTCCATACCCACAATATTCTACCACTGAACATGCCATATGGTCAATGGAAATACAAGGATCTAAAGTTTCTCTCTGAAAAACTAAGTTATCTGTTCTGGCACAATTGTCCCCTAAAGTCTTTATCGTCCAATTTTAACCCCGAGAATCTTGTTGAAATTGACATGCAACATAGTTGGGTCGAACACCTCTGGAAAGGAACTAAGCCTCTGGGAAAGTTGAAAATTATCAATTTAAAAGGCTCTCATCGTCTTAAGGAAACACCTGACTTCACTGAGGCAAAGAATCTTGAGAAGCTAATTCTTGGTAGATGCACAAGTTTGTATGAGGTTCACCCATCCATTTCTGCCCTTGAAAAACTTGTCCTCTTGGATCTAAGTTGGTGCGGCAAACTCAAGACCTTTTCAAGCAACATTAGTATGAAATCTCTTGAAACCCTTGATCTCTCTTTTTGTTCAATACTTGGGAAGTTTCCAGAGATTTCAGAAGTTATGGAGAAGCTTTCAAAGCTTTATTTTCAAGGGACTGCAATAAAAGAACTGCCTCGATCAATTAACAATCTTACAGGGCTTGTTACTTTGAATCTTGAATATTGCAGAGAACTTGAGATTCTTCCAAACAGCTTTGTTCAACTCAAGTCCCTGCAATTTCTTAATCTTTCTGGTTGTCCAAAGCTCAAGGGCTTTCCAGGAAATGTCGGAGATCTGGAAGGATTAAGAGAGCTTCGCTTGGATGAGATATCTGTTGAAGACCTTTGCCCATCAATTTCATCTCTTGAAAACCTTGAGAGTTTGAGTCTAAAGCAGTGCAAGAAACTTCATAGCCTTCCAAGCAGCATTCACGTGAAATCGCACATCTTCGTATTCATTATCAACACCGAATGGTTCGCTGCCGTTTAA

Protein Analysis

504

Amino Acids

57.48

Weight (kDa)

6.8

Isoelectric Point (pI)

35.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_ROQ1 PF23282 77 - 146 1e-20 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 346 - 431 2e-17 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 375 - 471 5.6e-11 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 417, 429
AciI CCGC 2 cut(s) 579, 999
AclWI GGATC 2 cut(s) 681, 993
AcoI YGGCCR 1 cut(s) 545
AcuI CTGAAG 1 cut(s) 537
AcvI CACGTG 1 cut(s) 1456
AfaI GTAC 2 cut(s) 381, 426
AfiI CCNNNNNNNGG 2 cut(s) 179, 326
AflII CTTAAG 1 cut(s) 866
AjnI CCWGG 3 cut(s) 186, 448, 1300
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
AluBI AGCT 8 cut(s) 207, 353, 910, 1114, 1123, 1236, 1288, 1336
AluI AGCT 8 cut(s) 207, 353, 910, 1114, 1123, 1236, 1288, 1336
Alw21I GWGCWC 1 cut(s) 355
AlwI GGATC 2 cut(s) 681, 993
Ama87I CYCGRG 3 cut(s) 178, 383, 755
AoxI GGCC 2 cut(s) 55, 545
ApeKI GCWGC 2 cut(s) 1446, 1502
Asp700I GAANNNNTTC 1 cut(s) 240
AsuC2I CCSGG 2 cut(s) 179, 180
AsuHPI GGTGA 1 cut(s) 938
AvaI CYCGRG 3 cut(s) 178, 383, 755
BalI TGGCCA 1 cut(s) 547
BanII GRGCYC 1 cut(s) 355
BbrPI CACGTG 1 cut(s) 1456
BbsI GAAGAC 1 cut(s) 1368
Bbv12I GWGCWC 1 cut(s) 355
BbvI GCAGC 2 cut(s) 1458, 1489
BccI CCATC 5 cut(s) 206, 324, 368, 958, 1381
BceAI ACGGC 2 cut(s) 525, 1490
BciT130I CCWGG 3 cut(s) 188, 450, 1302
BcnI CCSGG 2 cut(s) 179, 180
BfaI CTAG 3 cut(s) 218, 341, 401
BfmI CTRYAG 1 cut(s) 438
BfrI CTTAAG 1 cut(s) 866
BglII AGATCT 1 cut(s) 1315
BisI GCNGC 3 cut(s) 1000, 1447, 1503
BlsI GCNGC 3 cut(s) 1001, 1448, 1504
Bme1390I CCNGG 5 cut(s) 179, 180, 188, 450, 1302
BmeT110I CYCGRG 3 cut(s) 178, 383, 755
BmrFI CCNGG 5 cut(s) 179, 180, 188, 450, 1302
BmsI GCATC 2 cut(s) 378, 914
BpiI GAAGAC 1 cut(s) 1368
BplI GAGNNNNNCTC 2 cut(s) 99, 131
BpuEI CTTGAG 7 cut(s) 60, 923, 992, 1232, 1238, 1274, 1418
BpuMI CCSGG 2 cut(s) 179, 180
BsaAI YACGTR 1 cut(s) 1456
BsaBI GATNNNNATC 1 cut(s) 225
BsaJI CCNNGG 2 cut(s) 178, 449
BsaWI WCCGGW 1 cut(s) 326
BsaXI ACNNNNNCTCC 2 cut(s) 445, 475
Bsc4I CCNNNNNNNGG 2 cut(s) 179, 326
Bse8I GATNNNNATC 1 cut(s) 225
BseBI CCWGG 3 cut(s) 188, 450, 1302
BseDI CCNNGG 2 cut(s) 178, 449
BseGI GGATG 3 cut(s) 316, 950, 1351
BseJI GATNNNNATC 1 cut(s) 225
BseLI CCNNNNNNNGG 2 cut(s) 179, 326
BseMII CTCAG 3 cut(s) 567, 625, 879
BseXI GCAGC 2 cut(s) 1458, 1489
Bsh1236I CGCG 2 cut(s) 417, 429
BshFI GGCC 2 cut(s) 57, 547
BsiHKAI GWGCWC 1 cut(s) 355
BsiHKCI CYCGRG 3 cut(s) 178, 383, 755
BsiSI CCGG 2 cut(s) 179, 327
BsiWI CGTACG 1 cut(s) 424
BslFI GGGAC 3 cut(s) 708, 1150, 1237
BslI CCNNNNNNNGG 2 cut(s) 179, 326
BsmFI GGGAC 3 cut(s) 708, 1150, 1237
BsmI GAATGC 1 cut(s) 1449
BsnI GGCC 2 cut(s) 57, 547
BsoBI CYCGRG 3 cut(s) 178, 383, 755
Bsp1286I GDGCHC 1 cut(s) 355
Bsp143I GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
Bsp68I TCGCGA 1 cut(s) 417
BspACI CCGC 2 cut(s) 579, 999
BspANI GGCC 2 cut(s) 57, 547
BspCNI CTCAG 3 cut(s) 566, 624, 880
BspFNI CGCG 2 cut(s) 417, 429
BspPI GGATC 2 cut(s) 681, 993
BspQI GCTCTTC 1 cut(s) 438
BspTI CTTAAG 1 cut(s) 866
BssECI CCNNGG 2 cut(s) 178, 449
BssMI GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
Bst2UI CCWGG 3 cut(s) 188, 450, 1302
Bst6I CTCTTC 1 cut(s) 438
BstAFI CTTAAG 1 cut(s) 866
BstBAI YACGTR 1 cut(s) 1456
BstDEI CTNAG 8 cut(s) 197, 553, 602, 611, 698, 816, 888, 989
BstF5I GGATG 3 cut(s) 316, 950, 1351
BstFNI CGCG 2 cut(s) 417, 429
BstKTI GATC 6 cut(s) 49, 676, 988, 1057, 1163, 1318
BstMBI GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
BstMWI GCNNNNNNNGC 3 cut(s) 518, 1120, 1443
BstNI CCWGG 3 cut(s) 188, 450, 1302
BstNSI RCATGY 3 cut(s) 258, 649, 781
BstSCI CCNGG 5 cut(s) 177, 178, 186, 448, 1300
BstSFI CTRYAG 1 cut(s) 438
BstUI CGCG 2 cut(s) 417, 429
BstV1I GCAGC 2 cut(s) 1458, 1489
BstV2I GAAGAC 1 cut(s) 1368
BstX2I RGATCY 3 cut(s) 673, 985, 1315
BstYI RGATCY 3 cut(s) 673, 985, 1315
BsuRI GGCC 2 cut(s) 57, 547
BtgZI GCGATG 1 cut(s) 489
BtsCI GGATG 3 cut(s) 316, 950, 1351
BtsI GCAGTG 1 cut(s) 1424
BtsIMutI CAGTG 3 cut(s) 638, 885, 1424
BtuMI TCGCGA 1 cut(s) 417
Cfr9I CCCGGG 1 cut(s) 178
Csp6I GTAC 2 cut(s) 380, 425
CviAII CATG 5 cut(s) 255, 392, 491, 646, 778
CviQI GTAC 2 cut(s) 380, 425
DdeI CTNAG 8 cut(s) 197, 553, 602, 611, 698, 816, 888, 989
DpnI GATC 6 cut(s) 48, 675, 987, 1056, 1162, 1317
DpnII GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
DraI TTTAAA 2 cut(s) 265, 849
EaeI YGGCCR 1 cut(s) 545
Eam1104I CTCTTC 1 cut(s) 438
EarI CTCTTC 1 cut(s) 438
Ecl136II GAGCTC 1 cut(s) 353
Eco24I GRGCYC 1 cut(s) 355
Eco32I GATATC 2 cut(s) 227, 1353
Eco53kI GAGCTC 1 cut(s) 353
Eco57I CTGAAG 1 cut(s) 537
Eco72I CACGTG 1 cut(s) 1456
Eco88I CYCGRG 3 cut(s) 178, 383, 755
EcoICRI GAGCTC 1 cut(s) 353
EcoRII CCWGG 3 cut(s) 186, 448, 1300
EcoRV GATATC 2 cut(s) 227, 1353
EcoT22I ATGCAT 1 cut(s) 393
EcoT38I GRGCYC 1 cut(s) 355
FaeI CATG 5 cut(s) 258, 395, 494, 649, 781
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FaqI GGGAC 3 cut(s) 708, 1150, 1237
FatI CATG 5 cut(s) 254, 391, 490, 645, 777
FauNDI CATATG 1 cut(s) 652
Fnu4HI GCNGC 3 cut(s) 1000, 1447, 1503
FokI GGATG 3 cut(s) 303, 937, 1358
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 3 cut(s) 1000, 1447, 1503
FspBI CTAG 3 cut(s) 218, 341, 401
GluI GCNGC 3 cut(s) 1000, 1447, 1503
HaeIII GGCC 2 cut(s) 57, 547
HapII CCGG 2 cut(s) 179, 327
Hin1II CATG 5 cut(s) 258, 395, 494, 649, 781
HincII GTYRAC 1 cut(s) 498
HindII GTYRAC 1 cut(s) 498
HindIII AAGCTT 3 cut(s) 205, 1112, 1121
HinfI GANTC 7 cut(s) 183, 615, 760, 898, 1195, 1222, 1408
HpaI GTTAAC 1 cut(s) 498
HpaII CCGG 2 cut(s) 179, 327
HphI GGTGA 1 cut(s) 938
Hpy166II GTNNAC 5 cut(s) 131, 141, 380, 498, 946
Hpy188I TCNGA 8 cut(s) 174, 231, 373, 556, 614, 691, 1099, 1313
Hpy8I GTNNAC 5 cut(s) 131, 141, 380, 498, 946
HpyAV CCTTC 3 cut(s) 226, 1316, 1448
HpyCH4IV ACGT 3 cut(s) 133, 336, 1455
HpyF10VI GCNNNNNNNGC 3 cut(s) 518, 1120, 1443
HpyF3I CTNAG 8 cut(s) 197, 553, 602, 611, 698, 816, 888, 989
HpySE526I ACGT 3 cut(s) 133, 336, 1455
Hsp92II CATG 5 cut(s) 258, 395, 494, 649, 781
KspAI GTTAAC 1 cut(s) 498
Kzo9I GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
LguI GCTCTTC 1 cut(s) 438
LmnI GCTCC 2 cut(s) 107, 471
Lsp1109I GCAGC 2 cut(s) 1458, 1489
LweI GCATC 2 cut(s) 378, 914
MaeI CTAG 3 cut(s) 218, 341, 401
MaeII ACGT 3 cut(s) 133, 336, 1455
MaeIII GTNAC 2 cut(s) 358, 1186
MalI GATC 6 cut(s) 48, 675, 987, 1056, 1162, 1317
MboI GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
MboII GAAGA 7 cut(s) 47, 286, 455, 491, 1217, 1373, 1462
MfeI CAATTG 1 cut(s) 718
MflI RGATCY 3 cut(s) 673, 985, 1315
MhlI GDGCHC 1 cut(s) 355
MlsI TGGCCA 1 cut(s) 547
MluNI TGGCCA 1 cut(s) 547
MlyI GAGTC 2 cut(s) 624, 1417
MmeI TCCRAC 1 cut(s) 1291
MnlI CCTC 8 cut(s) 295, 397, 812, 831, 883, 934, 989, 1167
Mox20I TGGCCA 1 cut(s) 547
Mph1103I ATGCAT 1 cut(s) 393
MroXI GAANNNNTTC 1 cut(s) 240
MscI TGGCCA 1 cut(s) 547
MslI CAYNNNNRTG 3 cut(s) 536, 1031, 1454
Msp20I TGGCCA 1 cut(s) 547
MspCI CTTAAG 1 cut(s) 866
MspI CCGG 2 cut(s) 179, 327
MspR9I CCNGG 5 cut(s) 179, 180, 188, 450, 1302
MunI CAATTG 1 cut(s) 718
Mva1269I GAATGC 1 cut(s) 1449
MvaI CCWGG 3 cut(s) 188, 450, 1302
MvnI CGCG 2 cut(s) 417, 429
MwoI GCNNNNNNNGC 3 cut(s) 518, 1120, 1443
NciI CCSGG 2 cut(s) 179, 180
NdeI CATATG 1 cut(s) 652
NdeII GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
NlaIII CATG 5 cut(s) 258, 395, 494, 649, 781
NmuCI GTSAC 1 cut(s) 358
NruI TCGCGA 1 cut(s) 417
NsiI ATGCAT 1 cut(s) 393
NspI RCATGY 3 cut(s) 258, 649, 781
PaeR7I CTCGAG 1 cut(s) 383
PciSI GCTCTTC 1 cut(s) 438
PctI GAATGC 1 cut(s) 1449
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 5 cut(s) 183, 760, 898, 1195, 1222
Pfl23II CGTACG 1 cut(s) 424
PfoI TCCNGGA 2 cut(s) 186, 1300
PkrI GCNGC 3 cut(s) 1001, 1448, 1504
PleI GAGTC 2 cut(s) 623, 1416
PmaCI CACGTG 1 cut(s) 1456
PmlI CACGTG 1 cut(s) 1456
PpsI GAGTC 2 cut(s) 623, 1416
Ppu21I YACGTR 1 cut(s) 1456
Psp124BI GAGCTC 1 cut(s) 355
Psp6I CCWGG 3 cut(s) 186, 448, 1300
PspCI CACGTG 1 cut(s) 1456
PspGI CCWGG 3 cut(s) 186, 448, 1300
PspLI CGTACG 1 cut(s) 424
PsuI RGATCY 3 cut(s) 673, 985, 1315
RruI TCGCGA 1 cut(s) 417
RsaI GTAC 2 cut(s) 381, 426
RsaNI GTAC 2 cut(s) 380, 425
RseI CAYNNNNRTG 3 cut(s) 536, 1031, 1454
SacI GAGCTC 1 cut(s) 355
SapI GCTCTTC 1 cut(s) 438
SatI GCNGC 3 cut(s) 1000, 1447, 1503
Sau3AI GATC 6 cut(s) 46, 673, 985, 1054, 1160, 1315
SchI GAGTC 2 cut(s) 624, 1417
ScrFI CCNGG 5 cut(s) 179, 180, 188, 450, 1302
SduI GDGCHC 1 cut(s) 355
SfaNI GCATC 2 cut(s) 378, 914
SfcI CTRYAG 1 cut(s) 438
Sfr274I CTCGAG 1 cut(s) 383
SlaI CTCGAG 1 cut(s) 383
SmaI CCCGGG 1 cut(s) 180
SmiMI CAYNNNNRTG 3 cut(s) 536, 1031, 1454
SmlI CTYRAG 9 cut(s) 75, 383, 866, 902, 1007, 1217, 1247, 1289, 1397
SmoI CTYRAG 9 cut(s) 75, 383, 866, 902, 1007, 1217, 1247, 1289, 1397
SsiI CCGC 2 cut(s) 579, 999
SspI AATATT 3 cut(s) 240, 631, 1205
SspMI CTAG 3 cut(s) 218, 341, 401
SstI GAGCTC 1 cut(s) 355
StyD4I CCNGG 5 cut(s) 177, 178, 186, 448, 1300
TaiI ACGT 3 cut(s) 136, 339, 1458
TaqI TCGA 4 cut(s) 117, 384, 795, 1159
TatI WGTACW 1 cut(s) 379
TauI GCSGC 1 cut(s) 1002
TfiI GAWTC 5 cut(s) 183, 760, 898, 1195, 1222
TscAI CASTG 3 cut(s) 645, 892, 1424
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 2 cut(s) 1446, 1502
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 6 cut(s) 287, 492, 1049, 1371, 1421, 1468
TspGWI ACGGA 1 cut(s) 476
TspMI CCCGGG 1 cut(s) 178
TspRI CASTG 3 cut(s) 645, 892, 1424
Vha464I CTTAAG 1 cut(s) 866
XceI RCATGY 3 cut(s) 258, 649, 781
XcmI CCANNNNNNNNNTGG 1 cut(s) 657
XhoI CTCGAG 1 cut(s) 383
XmaI CCCGGG 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 3 cut(s) 218, 341, 401
Zsp2I ATGCAT 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.