pycom07g21840

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
23371062 .. 23371803
742 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g21840.2

Sequence Viewer

Length: 642 bp
ATGGATTTCTCTTATTCAGACTGGGTATACTTAAATGCTGAAGCTTTTGTTAGTATGACTCAACTAAGACTTCTCAAGATCAGTCATAAGGACTACCTTGTTAATCATGATTGCTGCAAACACCACCTGACTGGGCCCTTTAAGTTACTTAACTTGAGGTATCTCTCCTGGTTTGAATTCCCTCTCAAATCTTTACCATCCAACTTTCGATTCAAAAATCTTGTTGAACTTGACATGCAATATAGTCTCATTGACCGACTTTGGGAAGGAACCCAGGCACTGGAAAAGTTGAAATTCATCAATTTAAGTTATTGTGAATACCTTAAGGAAACCCCTGACTTCACAAATGTGCCAAATCTTGAGAGGCTAATTCTTCAAAGTTGTATAAGATTAGTTGAGGTTCACCCGTCTATTTTGACTCTTACAAACCTTGTTTTATTGAATCTGAAAAAGTGCAAAGAACTTAAGATTCTACCCAGCAGCATTCGTATGAAATCTCTCAAAACCTTTAATCTTTTTGGCTGTCGAAGTCTCGAGATATTTCCAAAGATTTCAGAAGTGATTGAGGGGTTAGAAGTGATTGATTTATCCACGTCAAGAATTAAAGAACTGTCATCGTCAATAAATATCTCACGGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

214

Amino Acids

24.88

Weight (kDa)

8.68

Isoelectric Point (pI)

28.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 280
AccI GTMKAC 1 cut(s) 27
AcsI RAATTY 2 cut(s) 176, 293
AcuI CTGAAG 1 cut(s) 60
AfiI CCNNNNNNNGG 2 cut(s) 262, 280
AflII CTTAAG 2 cut(s) 323, 464
AgsI TTSAA 6 cut(s) 176, 214, 227, 292, 377, 442
AjiI CACGTC 1 cut(s) 594
AjnI CCWGG 2 cut(s) 167, 273
AjuI GAANNNNNNNTTGG 2 cut(s) 194, 226
AleI CACNNNNGTG 1 cut(s) 347
AluBI AGCT 1 cut(s) 44
AluI AGCT 1 cut(s) 44
Alw26I GTCTC 2 cut(s) 251, 536
AlwNI CAGNNNCTG 1 cut(s) 280
Ama87I CYCGRG 1 cut(s) 533
AoxI GGCC 1 cut(s) 134
ApaI GGGCCC 1 cut(s) 138
ApeKI GCWGC 2 cut(s) 114, 480
ApoI RAATTY 2 cut(s) 176, 293
AspS9I GGNCC 2 cut(s) 134, 135
AsuHPI GGTGA 1 cut(s) 395
AvaI CYCGRG 1 cut(s) 533
BaeGI GKGCMC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 138
BbvI GCAGC 2 cut(s) 101, 492
BccI CCATC 1 cut(s) 205
BciT130I CCWGG 2 cut(s) 169, 275
BcoDI GTCTC 2 cut(s) 251, 536
BfrI CTTAAG 2 cut(s) 323, 464
BisI GCNGC 2 cut(s) 115, 481
BlsI GCNGC 2 cut(s) 116, 482
Bme1390I CCNGG 2 cut(s) 169, 275
BmeT110I CYCGRG 1 cut(s) 533
BmgBI CACGTC 1 cut(s) 594
BmgT120I GGNCC 2 cut(s) 134, 135
BmiI GGNNCC 2 cut(s) 136, 271
BmrFI CCNGG 2 cut(s) 169, 275
BmrI ACTGGG 2 cut(s) 31, 141
BmuI ACTGGG 2 cut(s) 31, 141
BpuEI CTTGAG 3 cut(s) 59, 175, 380
BsaJI CCNNGG 1 cut(s) 273
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 280
Bse1I ACTGG 3 cut(s) 26, 136, 285
BseBI CCWGG 2 cut(s) 169, 275
BseDI CCNNGG 1 cut(s) 273
BseGI GGATG 1 cut(s) 197
BseLI CCNNNNNNNGG 2 cut(s) 262, 280
BseNI ACTGG 3 cut(s) 26, 136, 285
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 2 cut(s) 101, 492
BseYI CCCAGC 1 cut(s) 476
BshFI GGCC 1 cut(s) 136
BsiHKCI CYCGRG 1 cut(s) 533
BslI CCNNNNNNNGG 2 cut(s) 262, 280
BsmAI GTCTC 2 cut(s) 251, 536
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 1 cut(s) 136
BsoBI CYCGRG 1 cut(s) 533
Bsp120I GGGCCC 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 1 cut(s) 78
BspANI GGCC 1 cut(s) 136
BspHI TCATGA 1 cut(s) 106
BspLI GGNNCC 2 cut(s) 136, 271
BspTI CTTAAG 2 cut(s) 323, 464
BsrI ACTGG 3 cut(s) 26, 136, 285
BssECI CCNNGG 1 cut(s) 273
BssMI GATC 1 cut(s) 78
BssNAI GTATAC 1 cut(s) 28
Bst1107I GTATAC 1 cut(s) 28
Bst2UI CCWGG 2 cut(s) 169, 275
Bst4CI ACNGT 1 cut(s) 612
BstAFI CTTAAG 2 cut(s) 323, 464
BstDEI CTNAG 1 cut(s) 65
BstF5I GGATG 1 cut(s) 197
BstKTI GATC 1 cut(s) 81
BstMAI GTCTC 2 cut(s) 251, 536
BstMBI GATC 1 cut(s) 78
BstNI CCWGG 2 cut(s) 169, 275
BstNSI RCATGY 1 cut(s) 238
BstSCI CCNGG 2 cut(s) 167, 273
BstSLI GKGCMC 1 cut(s) 138
BstV1I GCAGC 2 cut(s) 101, 492
BstXI CCANNNNNNTGG 1 cut(s) 131
BstZ17I GTATAC 1 cut(s) 28
BsuRI GGCC 1 cut(s) 136
BtrI CACGTC 1 cut(s) 594
BtsCI GGATG 1 cut(s) 197
BtsIMutI CAGTG 1 cut(s) 278
CaiI CAGNNNCTG 1 cut(s) 280
CciI TCATGA 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 134, 135
CviAII CATG 2 cut(s) 107, 235
CviJI RGCY 4 cut(s) 44, 136, 367, 522
CviKI_1 RGCY 4 cut(s) 44, 136, 367, 522
DdeI CTNAG 1 cut(s) 65
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
Eco24I GRGCYC 1 cut(s) 138
Eco57I CTGAAG 1 cut(s) 60
Eco88I CYCGRG 1 cut(s) 533
EcoO109I RGGNCCY 1 cut(s) 135
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 2 cut(s) 167, 273
EcoT38I GRGCYC 1 cut(s) 138
FaeI CATG 2 cut(s) 110, 238
FaiI YATR 8 cut(s) 28, 56, 87, 108, 236, 243, 386, 491
FatI CATG 2 cut(s) 106, 234
FblI GTMKAC 1 cut(s) 27
Fnu4HI GCNGC 2 cut(s) 115, 481
FokI GGATG 1 cut(s) 184
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 2 cut(s) 115, 481
GluI GCNGC 2 cut(s) 115, 481
GsaI CCCAGC 1 cut(s) 480
HaeIII GGCC 1 cut(s) 136
Hin1II CATG 2 cut(s) 110, 238
HindIII AAGCTT 1 cut(s) 42
HinfI GANTC 5 cut(s) 58, 210, 418, 442, 469
HphI GGTGA 1 cut(s) 395
Hpy166II GTNNAC 2 cut(s) 28, 403
Hpy188I TCNGA 3 cut(s) 19, 447, 556
Hpy188III TCNNGA 6 cut(s) 76, 107, 359, 533, 535, 597
Hpy8I GTNNAC 2 cut(s) 28, 403
HpyAV CCTTC 1 cut(s) 260
HpyCH4III ACNGT 1 cut(s) 612
HpyCH4IV ACGT 1 cut(s) 593
HpyCH4V TGCA 3 cut(s) 117, 238, 456
HpyF3I CTNAG 1 cut(s) 65
HpySE526I ACGT 1 cut(s) 593
Hsp92II CATG 2 cut(s) 110, 238
Kzo9I GATC 1 cut(s) 78
Lsp1109I GCAGC 2 cut(s) 101, 492
MaeII ACGT 1 cut(s) 593
MaeIII GTNAC 1 cut(s) 144
MalI GATC 1 cut(s) 80
MboI GATC 1 cut(s) 78
MboII GAAGA 1 cut(s) 365
MhlI GDGCHC 1 cut(s) 138
MluCI AATT 5 cut(s) 176, 293, 301, 369, 600
MlyI GAGTC 2 cut(s) 52, 412
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 5 cut(s) 150, 192, 357, 391, 559
MseI TTAA 9 cut(s) 32, 102, 141, 150, 305, 324, 465, 510, 603
MslI CAYNNNNRTG 2 cut(s) 347, 488
MspCI CTTAAG 2 cut(s) 323, 464
MspR9I CCNGG 2 cut(s) 169, 275
Mva1269I GAATGC 1 cut(s) 483
MvaI CCWGG 2 cut(s) 169, 275
NdeII GATC 1 cut(s) 78
NlaIII CATG 2 cut(s) 110, 238
NlaIV GGNNCC 2 cut(s) 136, 271
NspI RCATGY 1 cut(s) 238
OliI CACNNNNGTG 1 cut(s) 347
PaeR7I CTCGAG 1 cut(s) 533
PagI TCATGA 1 cut(s) 106
PctI GAATGC 1 cut(s) 483
PfeI GAWTC 3 cut(s) 210, 442, 469
PflMI CCANNNNNTGG 1 cut(s) 280
PkrI GCNGC 2 cut(s) 116, 482
PleI GAGTC 2 cut(s) 52, 412
PpsI GAGTC 2 cut(s) 52, 412
Psp6I CCWGG 2 cut(s) 167, 273
PspFI CCCAGC 1 cut(s) 476
PspGI CCWGG 2 cut(s) 167, 273
PspN4I GGNNCC 2 cut(s) 136, 271
PspOMI GGGCCC 1 cut(s) 134
PspPI GGNCC 2 cut(s) 134, 135
PstNI CAGNNNCTG 1 cut(s) 280
RseI CAYNNNNRTG 2 cut(s) 347, 488
SaqAI TTAA 9 cut(s) 32, 102, 141, 150, 305, 324, 465, 510, 603
SatI GCNGC 2 cut(s) 115, 481
Sau3AI GATC 1 cut(s) 78
Sau96I GGNCC 2 cut(s) 134, 135
SchI GAGTC 2 cut(s) 52, 412
ScrFI CCNGG 2 cut(s) 169, 275
SduI GDGCHC 1 cut(s) 138
SetI ASST 9 cut(s) 46, 99, 129, 161, 324, 402, 432, 509, 596
Sfr274I CTCGAG 1 cut(s) 533
SlaI CTCGAG 1 cut(s) 533
SmiMI CAYNNNNRTG 2 cut(s) 347, 488
SmlI CTYRAG 6 cut(s) 74, 154, 323, 359, 464, 533
SmoI CTYRAG 6 cut(s) 74, 154, 323, 359, 464, 533
Sse9I AATT 5 cut(s) 176, 293, 301, 369, 600
StyD4I CCNGG 2 cut(s) 167, 273
TaaI ACNGT 1 cut(s) 612
TaiI ACGT 1 cut(s) 596
TaqI TCGA 3 cut(s) 208, 526, 534
TaqII GACCGA 1 cut(s) 270
TasI AATT 5 cut(s) 176, 293, 301, 369, 600
TfiI GAWTC 3 cut(s) 210, 442, 469
Tru1I TTAA 9 cut(s) 32, 102, 141, 150, 305, 324, 465, 510, 603
Tru9I TTAA 9 cut(s) 32, 102, 141, 150, 305, 324, 465, 510, 603
TscAI CASTG 1 cut(s) 285
TseI GCWGC 2 cut(s) 114, 480
TspDTI ATGAA 2 cut(s) 286, 506
TspRI CASTG 1 cut(s) 285
Van91I CCANNNNNTGG 1 cut(s) 280
Vha464I CTTAAG 2 cut(s) 323, 464
XapI RAATTY 2 cut(s) 176, 293
XceI RCATGY 1 cut(s) 238
XhoI CTCGAG 1 cut(s) 533
XmiI GTMKAC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.