TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1338 |
| AccB1I | GGYRCC | 2 cut(s) | 212, 355 |
| AciI | CCGC | 4 cut(s) | 217, 475, 711, 1288 |
| AclWI | GGATC | 4 cut(s) | 313, 434, 577, 632 |
| AcsI | RAATTY | 2 cut(s) | 1029, 1155 |
| AcuI | CTGAAG | 2 cut(s) | 306, 830 |
| AdeI | CACNNNGTG | 1 cut(s) | 691 |
| AfaI | GTAC | 1 cut(s) | 825 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1040, 1187 |
| AflII | CTTAAG | 1 cut(s) | 1058 |
| AflIII | ACRYGT | 1 cut(s) | 42 |
| AgsI | TTSAA | 8 cut(s) | 40, 335, 458, 644, 770, 788, 859, 1230 |
| AjnI | CCWGG | 1 cut(s) | 1309 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 995, 1027 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1182, 1214 |
| Alw21I | GWGCWC | 2 cut(s) | 294, 996 |
| Alw26I | GTCTC | 1 cut(s) | 388 |
| Alw44I | GTGCAC | 1 cut(s) | 992 |
| AlwI | GGATC | 4 cut(s) | 313, 434, 577, 632 |
| Ama87I | CYCGRG | 1 cut(s) | 116 |
| AoxI | GGCC | 3 cut(s) | 18, 144, 166 |
| ApaLI | GTGCAC | 1 cut(s) | 992 |
| ApeKI | GCWGC | 2 cut(s) | 127, 1317 |
| ApoI | RAATTY | 2 cut(s) | 1029, 1155 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 745, 777 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 681 |
| AspS9I | GGNCC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 218 |
| AvaI | CYCGRG | 1 cut(s) | 116 |
| BaeGI | GKGCMC | 3 cut(s) | 215, 360, 996 |
| BanI | GGYRCC | 2 cut(s) | 212, 355 |
| BanII | GRGCYC | 1 cut(s) | 294 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| BauI | CACGAG | 1 cut(s) | 519 |
| BbsI | GAAGAC | 2 cut(s) | 144, 903 |
| Bbv12I | GWGCWC | 2 cut(s) | 294, 996 |
| BbvI | GCAGC | 2 cut(s) | 139, 1304 |
| BccI | CCATC | 2 cut(s) | 1067, 1190 |
| BceAI | ACGGC | 2 cut(s) | 219, 1387 |
| BciT130I | CCWGG | 1 cut(s) | 1311 |
| BclI | TGATCA | 1 cut(s) | 6 |
| BcoDI | GTCTC | 1 cut(s) | 388 |
| BfaI | CTAG | 3 cut(s) | 735, 849, 1079 |
| BfmI | CTRYAG | 2 cut(s) | 1262, 1318 |
| BfrI | CTTAAG | 1 cut(s) | 1058 |
| BisI | GCNGC | 2 cut(s) | 128, 1318 |
| BlpI | GCTNAGC | 1 cut(s) | 540 |
| BlsI | GCNGC | 2 cut(s) | 129, 1319 |
| Bme1390I | CCNGG | 1 cut(s) | 1311 |
| BmeT110I | CYCGRG | 1 cut(s) | 116 |
| BmgT120I | GGNCC | 1 cut(s) | 18 |
| BmiI | GGNNCC | 2 cut(s) | 214, 357 |
| BmrFI | CCNGG | 1 cut(s) | 1311 |
| BmsI | GCATC | 2 cut(s) | 259, 526 |
| BpiI | GAAGAC | 2 cut(s) | 144, 903 |
| Bpu10I | CCTNAGC | 1 cut(s) | 666 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 540 |
| BpuEI | CTTGAG | 2 cut(s) | 383, 921 |
| Bsa29I | ATCGAT | 1 cut(s) | 267 |
| BsaBI | GATNNNNATC | 3 cut(s) | 587, 623, 1212 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1040, 1187 |
| Bse1I | ACTGG | 1 cut(s) | 147 |
| Bse3DI | GCAATG | 2 cut(s) | 310, 729 |
| Bse8I | GATNNNNATC | 3 cut(s) | 587, 623, 1212 |
| BseBI | CCWGG | 1 cut(s) | 1311 |
| BseCI | ATCGAT | 1 cut(s) | 267 |
| BseGI | GGATG | 2 cut(s) | 538, 1057 |
| BseJI | GATNNNNATC | 3 cut(s) | 587, 623, 1212 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1040, 1187 |
| BseMI | GCAATG | 2 cut(s) | 310, 729 |
| BseMII | CTCAG | 1 cut(s) | 657 |
| BseNI | ACTGG | 1 cut(s) | 147 |
| BseRI | GAGGAG | 1 cut(s) | 418 |
| BseSI | GKGCMC | 3 cut(s) | 215, 360, 996 |
| BseXI | GCAGC | 2 cut(s) | 139, 1304 |
| BseYI | CCCAGC | 1 cut(s) | 510 |
| BsgI | GTGCAG | 1 cut(s) | 840 |
| BshFI | GGCC | 3 cut(s) | 20, 146, 168 |
| BshNI | GGYRCC | 2 cut(s) | 212, 355 |
| BshVI | ATCGAT | 1 cut(s) | 267 |
| BsiHKAI | GWGCWC | 2 cut(s) | 294, 996 |
| BsiHKCI | CYCGRG | 1 cut(s) | 116 |
| BsiSI | CCGG | 1 cut(s) | 165 |
| BslFI | GGGAC | 1 cut(s) | 527 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1040, 1187 |
| BsmAI | GTCTC | 1 cut(s) | 388 |
| BsmFI | GGGAC | 1 cut(s) | 527 |
| BsnI | GGCC | 3 cut(s) | 20, 146, 168 |
| BsoBI | CYCGRG | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 4 cut(s) | 215, 294, 360, 996 |
| Bsp143I | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 540 |
| BspACI | CCGC | 4 cut(s) | 217, 475, 711, 1288 |
| BspANI | GGCC | 3 cut(s) | 20, 146, 168 |
| BspCNI | CTCAG | 1 cut(s) | 658 |
| BspDI | ATCGAT | 1 cut(s) | 267 |
| BspLI | GGNNCC | 2 cut(s) | 214, 357 |
| BspMAI | CTGCAG | 2 cut(s) | 1266, 1322 |
| BspPI | GGATC | 4 cut(s) | 313, 434, 577, 632 |
| BspQI | GCTCTTC | 2 cut(s) | 282, 453 |
| BspT107I | GGYRCC | 2 cut(s) | 212, 355 |
| BspTI | CTTAAG | 1 cut(s) | 1058 |
| BsrDI | GCAATG | 2 cut(s) | 310, 729 |
| BsrI | ACTGG | 1 cut(s) | 147 |
| BssMI | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| BssSI | CACGAG | 1 cut(s) | 519 |
| Bst2BI | CACGAG | 1 cut(s) | 519 |
| Bst2UI | CCWGG | 1 cut(s) | 1311 |
| Bst4CI | ACNGT | 3 cut(s) | 640, 920, 1166 |
| Bst6I | CTCTTC | 2 cut(s) | 282, 453 |
| BstAFI | CTTAAG | 1 cut(s) | 1058 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 269 |
| BstC8I | GCNNGC | 2 cut(s) | 473, 672 |
| BstDEI | CTNAG | 3 cut(s) | 540, 666, 1089 |
| BstF5I | GGATG | 2 cut(s) | 538, 1057 |
| BstKTI | GATC | 5 cut(s) | 9, 321, 442, 585, 627 |
| BstMAI | GTCTC | 1 cut(s) | 388 |
| BstMBI | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 89, 269, 717, 1380 |
| BstNI | CCWGG | 1 cut(s) | 1311 |
| BstNSI | RCATGY | 2 cut(s) | 762, 1119 |
| BstSCI | CCNGG | 1 cut(s) | 1309 |
| BstSFI | CTRYAG | 2 cut(s) | 1262, 1318 |
| BstSLI | GKGCMC | 3 cut(s) | 215, 360, 996 |
| BstV1I | GCAGC | 2 cut(s) | 139, 1304 |
| BstV2I | GAAGAC | 2 cut(s) | 144, 903 |
| BstX2I | RGATCY | 1 cut(s) | 318 |
| BstYI | RGATCY | 1 cut(s) | 318 |
| Bsu15I | ATCGAT | 1 cut(s) | 267 |
| BsuRI | GGCC | 3 cut(s) | 20, 146, 168 |
| BsuTUI | ATCGAT | 1 cut(s) | 267 |
| BtsCI | GGATG | 2 cut(s) | 538, 1057 |
| BtsI | GCAGTG | 1 cut(s) | 137 |
| BtsIMutI | CAGTG | 3 cut(s) | 137, 636, 1192 |
| Cac8I | GCNNGC | 2 cut(s) | 473, 672 |
| Cfr13I | GGNCC | 1 cut(s) | 18 |
| ClaI | ATCGAT | 1 cut(s) | 267 |
| Csp6I | GTAC | 1 cut(s) | 824 |
| CviAII | CATG | 5 cut(s) | 182, 759, 815, 1039, 1116 |
| CviQI | GTAC | 1 cut(s) | 824 |
| DdeI | CTNAG | 3 cut(s) | 540, 666, 1089 |
| DpnI | GATC | 5 cut(s) | 8, 320, 441, 584, 626 |
| DpnII | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| DraI | TTTAAA | 1 cut(s) | 1126 |
| DraIII | CACNNNGTG | 1 cut(s) | 691 |
| Eam1104I | CTCTTC | 2 cut(s) | 282, 453 |
| EarI | CTCTTC | 2 cut(s) | 282, 453 |
| EciI | GGCGGA | 1 cut(s) | 1277 |
| Ecl136II | GAGCTC | 1 cut(s) | 292 |
| Eco24I | GRGCYC | 1 cut(s) | 294 |
| Eco32I | GATATC | 2 cut(s) | 1214, 1345 |
| Eco53kI | GAGCTC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 2 cut(s) | 306, 830 |
| Eco88I | CYCGRG | 1 cut(s) | 116 |
| EcoICRI | GAGCTC | 1 cut(s) | 292 |
| EcoRII | CCWGG | 1 cut(s) | 1309 |
| EcoRV | GATATC | 2 cut(s) | 1214, 1345 |
| EcoT38I | GRGCYC | 1 cut(s) | 294 |
| FaeI | CATG | 5 cut(s) | 185, 762, 818, 1042, 1119 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 392, 424, 1052, 1084 |
| FaqI | GGGAC | 1 cut(s) | 527 |
| FatI | CATG | 5 cut(s) | 181, 758, 814, 1038, 1115 |
| FauI | CCCGC | 1 cut(s) | 224 |
| FauNDI | CATATG | 1 cut(s) | 828 |
| FbaI | TGATCA | 1 cut(s) | 6 |
| Fnu4HI | GCNGC | 2 cut(s) | 128, 1318 |
| FokI | GGATG | 2 cut(s) | 545, 1064 |
| FriOI | GRGCYC | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 2 cut(s) | 128, 1318 |
| FspBI | CTAG | 3 cut(s) | 735, 849, 1079 |
| GluI | GCNGC | 2 cut(s) | 128, 1318 |
| GsaI | CCCAGC | 1 cut(s) | 514 |
| HaeIII | GGCC | 3 cut(s) | 20, 146, 168 |
| HapII | CCGG | 1 cut(s) | 165 |
| Hin1II | CATG | 5 cut(s) | 185, 762, 818, 1042, 1119 |
| HincII | GTYRAC | 1 cut(s) | 73 |
| HindII | GTYRAC | 1 cut(s) | 73 |
| HindIII | AAGCTT | 3 cut(s) | 417, 542, 1066 |
| HinfI | GANTC | 9 cut(s) | 281, 331, 396, 492, 515, 804, 852, 1085, 1295 |
| HpaII | CCGG | 1 cut(s) | 165 |
| HphI | GGTGA | 2 cut(s) | 16, 218 |
| Hpy166II | GTNNAC | 3 cut(s) | 73, 685, 994 |
| Hpy188I | TCNGA | 8 cut(s) | 195, 252, 286, 385, 393, 415, 451, 1107 |
| Hpy8I | GTNNAC | 3 cut(s) | 73, 685, 994 |
| HpyAV | CCTTC | 4 cut(s) | 179, 283, 794, 853 |
| HpyCH4III | ACNGT | 3 cut(s) | 640, 920, 1166 |
| HpyCH4IV | ACGT | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 9 cut(s) | 127, 758, 821, 832, 994, 1115, 1148, 1264, 1320 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 89, 269, 717, 1380 |
| HpyF3I | CTNAG | 3 cut(s) | 540, 666, 1089 |
| HpySE526I | ACGT | 1 cut(s) | 44 |
| Hsp92II | CATG | 5 cut(s) | 185, 762, 818, 1042, 1119 |
| Ksp22I | TGATCA | 1 cut(s) | 6 |
| Kzo9I | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| LguI | GCTCTTC | 2 cut(s) | 282, 453 |
| LmnI | GCTCC | 3 cut(s) | 297, 405, 968 |
| Lsp1109I | GCAGC | 2 cut(s) | 139, 1304 |
| LweI | GCATC | 2 cut(s) | 259, 526 |
| MaeI | CTAG | 3 cut(s) | 735, 849, 1079 |
| MaeII | ACGT | 1 cut(s) | 44 |
| MaeIII | GTNAC | 2 cut(s) | 138, 1219 |
| MalI | GATC | 5 cut(s) | 8, 320, 441, 584, 626 |
| MboI | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| MflI | RGATCY | 1 cut(s) | 318 |
| MhlI | GDGCHC | 4 cut(s) | 215, 294, 360, 996 |
| MluCI | AATT | 7 cut(s) | 578, 753, 764, 1029, 1155, 1224, 1281 |
| MlyI | GAGTC | 4 cut(s) | 275, 390, 509, 1304 |
| MmeI | TCCRAC | 1 cut(s) | 993 |
| MnlI | CCTC | 9 cut(s) | 112, 157, 197, 202, 332, 391, 396, 544, 829 |
| MroXI | GAANNNNTTC | 1 cut(s) | 681 |
| MseI | TTAA | 7 cut(s) | 573, 795, 957, 1059, 1125, 1302, 1359 |
| MspCI | CTTAAG | 1 cut(s) | 1058 |
| MspI | CCGG | 1 cut(s) | 165 |
| MspR9I | CCNGG | 1 cut(s) | 1311 |
| MvaI | CCWGG | 1 cut(s) | 1311 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 89, 269, 717, 1380 |
| NdeI | CATATG | 1 cut(s) | 828 |
| NdeII | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| NlaIII | CATG | 5 cut(s) | 185, 762, 818, 1042, 1119 |
| NlaIV | GGNNCC | 2 cut(s) | 214, 357 |
| NspI | RCATGY | 2 cut(s) | 762, 1119 |
| PaeR7I | CTCGAG | 1 cut(s) | 116 |
| PciSI | GCTCTTC | 2 cut(s) | 282, 453 |
| PdmI | GAANNNNTTC | 1 cut(s) | 681 |
| PfeI | GAWTC | 5 cut(s) | 331, 492, 804, 852, 1085 |
| PkrI | GCNGC | 2 cut(s) | 129, 1319 |
| PleI | GAGTC | 4 cut(s) | 275, 390, 509, 1303 |
| PpsI | GAGTC | 4 cut(s) | 275, 390, 509, 1303 |
| PsiI | TTATAA | 1 cut(s) | 1338 |
| Psp124BI | GAGCTC | 1 cut(s) | 294 |
| Psp6I | CCWGG | 1 cut(s) | 1309 |
| PspFI | CCCAGC | 1 cut(s) | 510 |
| PspGI | CCWGG | 1 cut(s) | 1309 |
| PspN4I | GGNNCC | 2 cut(s) | 214, 357 |
| PspPI | GGNCC | 1 cut(s) | 18 |
| PstI | CTGCAG | 2 cut(s) | 1266, 1322 |
| PsuI | RGATCY | 1 cut(s) | 318 |
| RsaI | GTAC | 1 cut(s) | 825 |
| RsaNI | GTAC | 1 cut(s) | 824 |
| SacI | GAGCTC | 1 cut(s) | 294 |
| SapI | GCTCTTC | 2 cut(s) | 282, 453 |
| SaqAI | TTAA | 7 cut(s) | 573, 795, 957, 1059, 1125, 1302, 1359 |
| SatI | GCNGC | 2 cut(s) | 128, 1318 |
| Sau3AI | GATC | 5 cut(s) | 6, 318, 439, 582, 624 |
| Sau96I | GGNCC | 1 cut(s) | 18 |
| SchI | GAGTC | 4 cut(s) | 275, 390, 509, 1304 |
| ScrFI | CCNGG | 1 cut(s) | 1311 |
| SduI | GDGCHC | 4 cut(s) | 215, 294, 360, 996 |
| SfaNI | GCATC | 2 cut(s) | 259, 526 |
| SfcI | CTRYAG | 2 cut(s) | 1262, 1318 |
| Sfr274I | CTCGAG | 1 cut(s) | 116 |
| SlaI | CTCGAG | 1 cut(s) | 116 |
| SmlI | CTYRAG | 4 cut(s) | 116, 398, 936, 1058 |
| SmoI | CTYRAG | 4 cut(s) | 116, 398, 936, 1058 |
| Sse9I | AATT | 7 cut(s) | 578, 753, 764, 1029, 1155, 1224, 1281 |
| SsiI | CCGC | 4 cut(s) | 217, 475, 711, 1288 |
| SspI | AATATT | 2 cut(s) | 773, 1111 |
| SspMI | CTAG | 3 cut(s) | 735, 849, 1079 |
| SstI | GAGCTC | 1 cut(s) | 294 |
| StyD4I | CCNGG | 1 cut(s) | 1309 |
| TaaI | ACNGT | 3 cut(s) | 640, 920, 1166 |
| TaiI | ACGT | 1 cut(s) | 47 |
| TaqI | TCGA | 4 cut(s) | 117, 267, 627, 1245 |
| TasI | AATT | 7 cut(s) | 578, 753, 764, 1029, 1155, 1224, 1281 |
| TatI | WGTACW | 1 cut(s) | 823 |
| TfiI | GAWTC | 5 cut(s) | 331, 492, 804, 852, 1085 |
| Tru1I | TTAA | 7 cut(s) | 573, 795, 957, 1059, 1125, 1302, 1359 |
| Tru9I | TTAA | 7 cut(s) | 573, 795, 957, 1059, 1125, 1302, 1359 |
| TscAI | CASTG | 3 cut(s) | 137, 643, 1192 |
| TseI | GCWGC | 2 cut(s) | 127, 1317 |
| TspDTI | ATGAA | 3 cut(s) | 147, 265, 1148 |
| TspRI | CASTG | 3 cut(s) | 137, 643, 1192 |
| Vha464I | CTTAAG | 1 cut(s) | 1058 |
| VneI | GTGCAC | 1 cut(s) | 992 |
| XapI | RAATTY | 2 cut(s) | 1029, 1155 |
| XbaI | TCTAGA | 1 cut(s) | 848 |
| XceI | RCATGY | 2 cut(s) | 762, 1119 |
| XhoI | CTCGAG | 1 cut(s) | 116 |
| XmnI | GAANNNNTTC | 1 cut(s) | 681 |
| XspI | CTAG | 3 cut(s) | 735, 849, 1079 |