Rmu_ssc0000018.1_g000006

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000018.1
OG0000067
Physical Location & Seq
Forward (+)
20038 .. 24013
3976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000018.1_g000006.1.cds

Sequence Viewer

Length: 2145 bp
atgtttcccgagatttcagaagatatgggggcactatcggagcttatgttagatggcagtgcaattaaggaaataccatcctcaattgaacggcttcggggacttaaatcattaagtatgaaaaactgcacaagccttgtctgtcttccggacagtatctgtaatttggcagaccttatatatctctacctcgaagggtgctcaaaactttgcaacttgcctgagaatttggggaatttaaaatatctgtgtgaacttaaagtagatgatactggaataaaacgactcccggcctgtatcttacatttgaagcttggaagattaaagtttcattattgcaaacaaatggaagcccccctttcatcatggccatcatcgattgaagatcgttgtactgttgtggtgcatcttgattttagttattgcaatctgaaggtgttatcggatgccattgcttattttcgttcactaaaagtattgaatttgtcaagaaataacaatctgaagagcttgcctgcaaccatgaatcaactgggttacttagaacggcttcaattggaagattgcaagagactgagatcaataccagagctttcatcaagaataagttacataaatgcgcataattgcacagctttggaagctgtttcaacaccacagtctccctacgatattggtcgatgcttcatattttctaattgcagtcagctgatacagagagattttttcagagacattgtagaaactcatttccctcctcagggtaattgttcccgacccttttatttctccattcctagaactgaaattccagagcagttcatccatcagggtagggggtcttccgtaactgcccagctaccacaaaattggtttcacagcaacaagtttttggggttcgctatttgcggggttactaatcagccccagggtgttgattattggaaactgtctgctcgatgtttctttaccttcaaaggagatcattgcgagtaccgtttcagtttctctttgttcaatatttattttgacggtttctaccgcgactggcttgtgtcaaatcacatgttagtgggatatgtgccatggtctgaatttggcattaatggagaggaagtgaatgaacgccattacactgaggccaaatttgagatagaattattgcactgtgaaacattggaggaagacggggtactattccaccccagcatcgaaaggtgtgacccttgcatcgaaaggtgtggagttcgattcgtttttgccaacaacgaggatgaggaagttgcccatcaagattttggggaaccaatggtacaaggtgataattctgagatcaggagccttgagggctgctcagctgaacgcagtggtagtgacatcacaagtgacacctctgatgaggaggagcaataccttaaattatcggaagtttttgaaggtgcaaacagagaaccgagtatggagactgaagttccttctgatggctttaggtgggtgaagtatgcccaaacagacataccaggagctaaatccccaagagtctattatgtatgcgctcctcaaaatgtcggaggctgcatggcaataaaggaagtacagcgctccaatgataaagaaattcttaaaattacttacagaggaaggcacacttgtacactagcctccaccagcaatggaggaagggtagatagcagtacctccgtggccaatggtgcatcgagtgttcatgatcaagttgtccaatcaccaagctcaccagtagccaatggtcatggaggaaatgtaaccagagtagccgacaatcctgtgaatgacaacaatatgatcatgttacgagatgcaagctcacaggatatggaaccgacaccctcaaatgttgcaagtgtttcatctcaaccagtgatctcatcaccatctctgactcaagttaaccttcaacctcagtcttgttcgcagcccattgttataagatcatctcctaattccagaacaattgtatgccccaacacagggatgttaatgaagaccaagtcagtagcacataaggctaaacccatgcctaaacctgtgacaaaaaccagcacaagagcaagagcccaacaaggaccaaagcaggattccgacaagaaaatgtggaagccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

714

Amino Acids

80.0

Weight (kDa)

5.92

Isoelectric Point (pI)

52.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000067)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01690 FvH4_6g01690 FvH4_7g11151 FvH4_7g11160 FvH4_7g11570 FvH4_7g17700 FvH4_7g26071 FvH4_7g28510 FvH4_7g28520 FvH4_7g28530 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28540 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550 FvH4_7g28550
malus_domestica MD00G1020300.v1.1 MD00G1020400.v1.1 MD00G1020500.v1.1 MD00G1020700.v1.1 MD00G1021100.v1.1 MD00G1131100.v1.1 MD01G1188900.v1.1 MD01G1189000.v1.1 MD01G1189200.v1.1 MD01G1190100.v1.1 MD01G1190300.v1.1 MD01G1190500.v1.1 MD01G1190700.v1.1 MD01G1191400.v1.1 MD02G1260000.v1.1 MD02G1260200.v1.1 MD02G1260400.v1.1 MD03G1202400.v1.1 MD04G1022500.v1.1 MD04G1022700.v1.1 MD04G1200400.v1.1 MD07G1015300.v1.1 MD07G1015400.v1.1 MD07G1141800.v1.1 MD07G1242100.v1.1 MD07G1242500.v1.1 MD07G1243000.v1.1 MD07G1243500.v1.1 MD07G1244000.v1.1 MD07G1244600.v1.1 MD07G1245100.v1.1 MD07G1245600.v1.1 MD07G1246000.v1.1 MD07G1246200.v1.1 MD07G1260000.v1.1 MD07G1260700.v1.1 MD07G1261100.v1.1 MD08G1229600.v1.1 MD08G1229700.v1.1 MD08G1230200.v1.1 MD09G1186700.v1.1 MD09G1186800.v1.1 MD17G1208600.v1.1
pyrus_communis pycom01g20080 pycom01g20090 pycom01g20120 pycom01g20130 pycom01g20160 pycom01g20200 pycom01g20210 pycom01g20250 pycom02g22140 pycom02g22170 pycom02g22200 pycom02g22220 pycom02g22230 pycom03g15410 pycom03g15420 pycom04g01960 pycom04g01970 pycom07g21840 pycom07g21930 pycom07g21960 pycom07g22000 pycom07g23350 pycom07g23370 pycom07g23440 pycom07g23450 pycom07g23460 pycom07g23500 pycom07g23530 pycom07g23590 pycom07g23660 pycom07g23670 pycom07g23690 pycom07g23710 pycom07g23760 pycom07g23770 pycom07g23780 pycom07g23800 pycom07g23820 pycom08g19980 pycom08g19990 pycom08g20010 pycom08g20020 pycom17g04750 pycom17g21140 pycom17g21200 pycom17g21250 pycom17g21270 pycom17g21290 pycom17g21340 pycom17g21350
rosa_chinensis RchiOBHm_Chr1g0335971 RchiOBHm_Chr1g0349181 RchiOBHm_Chr1g0349211 RchiOBHm_Chr1g0349221 RchiOBHm_Chr1g0350001 RchiOBHm_Chr1g0372491 RchiOBHm_Chr1g0372501 RchiOBHm_Chr1g0372511 RchiOBHm_Chr1g0372541 RchiOBHm_Chr1g0375911 RchiOBHm_Chr1g0375921 RchiOBHm_Chr1g0375931 RchiOBHm_Chr1g0375941 RchiOBHm_Chr1g0375951 RchiOBHm_Chr3g0454321 RchiOBHm_Chr6g0266131 RchiOBHm_Chr6g0270371 RchiOBHm_Chr6g0270381 RchiOBHm_Chr6g0270391 RchiOBHm_Chr7g0232121 RchiOBHm_Chr7g0232831
rosa_laevigata RLG00000008620 RLG00000009600 RLG00000010114 RLG00000020933 RLG00000022777 RLG00000022778 RLG00000025461 RLG00000025462 RLG00000026641 RLG00000026642 RLG00000026643 RLG00000026894 RLG00000028442 RLG00000028506 RLG00000028510 RLG00000028563 RLG00000028564 RLG00000028570 RLG00000028574 RLG00000028577 RLG00000028579 RLG00000028580 RLG00000028582 RLG00000028584 RLG00000028588 RLG00000028591 RLG00000028592 RLG00000028596
rosa_multiflora Rmu_co8179714.1_g000001 Rmu_co8285207.1_g000001 Rmu_co8469031.1_g000001 Rmu_co8499245.1_g000002 Rmu_sc0000616.1_g000011 Rmu_sc0000827.1_g000022 Rmu_sc0000827.1_g000025 Rmu_sc0000827.1_g000034 Rmu_sc0000827.1_g000036 Rmu_sc0001340.1_g000001 Rmu_sc0001909.1_g000018 Rmu_sc0002863.1_g000018 Rmu_sc0002863.1_g000031 Rmu_sc0002914.1_g000028 Rmu_sc0002914.1_g000029 Rmu_sc0002914.1_g000032 Rmu_sc0003385.1_g000001 Rmu_sc0003385.1_g000008 Rmu_sc0003385.1_g000009 Rmu_sc0003385.1_g000013 Rmu_sc0003385.1_g000015 Rmu_sc0003385.1_g000025 Rmu_sc0003441.1_g000069 Rmu_sc0003674.1_g000007 Rmu_sc0003674.1_g000011 Rmu_sc0004618.1_g000001 Rmu_sc0005410.1_g000018 Rmu_sc0006415.1_g000005 Rmu_sc0006415.1_g000006 Rmu_sc0006415.1_g000014 Rmu_sc0006415.1_g000018 Rmu_sc0009606.1_g000011 Rmu_sc0011111.1_g000006 Rmu_sc0011709.1_g000003 Rmu_sc0011709.1_g000006 Rmu_sc0014584.1_g000002 Rmu_sc0015952.1_g000001 Rmu_sc0019347.1_g000001 Rmu_sc0019347.1_g000002 Rmu_sc0019347.1_g000003 Rmu_sc0023808.1_g000001 Rmu_sc0032581.1_g000001 Rmu_sc0034725.1_g000002 Rmu_sc0035038.1_g000001 Rmu_ssc0000018.1_g000005 Rmu_ssc0000018.1_g000006 Rmu_ssc0000116.1_g000002 Rmu_ssc0000150.1_g000009 Rmu_ssc0000150.1_g000011 Rmu_ssc0000472.1_g000013
rosa_roxburghii Rroxscaffold_165G00437140 Rroxscaffold_174G00435220 Rroxscaffold_3G00228770 Rroxscaffold_3G00228780 Rroxscaffold_4G00282480 Rroxscaffold_4G00282490 Rroxscaffold_4G00282510 Rroxscaffold_4G00282520 Rroxscaffold_4G00282540 Rroxscaffold_4G00284870 Rroxscaffold_4G00295380 Rroxscaffold_4G00305140 Rroxscaffold_4G00305150 Rroxscaffold_4G00305210 Rroxscaffold_4G00305760 Rroxscaffold_4G00305810 Rroxscaffold_4G00305840 Rroxscaffold_4G00305900 Rroxscaffold_4G00305920 Rroxscaffold_4G00305960 Rroxscaffold_4G00305980 Rroxscaffold_4G00305990 Rroxscaffold_4G00306020 Rroxscaffold_4G00325020 Rroxscaffold_5G00352760 Rroxscaffold_6G00425210 Rroxscaffold_7G00201950 Rroxscaffold_7G00214940
rosa_rugosa Rorug01G0048900 Rorug01G0049000 Rorug01G0201400 Rorug01G0201700 Rorug01G0202000 Rorug01G0207700 Rorug01G0207800 Rorug01G0207900 Rorug01G0286300 Rorug01G0286400 Rorug01G0286500 Rorug01G0372500 Rorug01G0372600 Rorug01G0392300 Rorug01G0392400 Rorug01G0392500 Rorug01G0392600 Rorug01G0392700 Rorug01G0392800 Rorug01G0392800 Rorug01G0392900 Rorug01G0393000 Rorug02G0654200 Rorug02G0654200 Rorug04G0027700 Rorug05G0351300 Rorug05G0351400 Rorug05G0351600 Rorug05G0406600 Rorug07G0269500 Rorug07G0276200 Rorug07G0276200
rosa_samantha Rh1AG224200 Rh1AG229900 Rh1AG297600 Rh1AG297700 Rh1AG381000 Rh1AG404200 Rh1AG404300 Rh1AG404400 Rh1BG184300 Rh1BG367600 Rh1BG367900 Rh1BG368000 Rh1CG203700 Rh1CG208900 Rh1CG279000 Rh1CG279100 Rh1CG357900 Rh1CG380500 Rh1CG380700 Rh1CG380800 Rh1CG380900 Rh1DG214000 Rh3AG058200 Rh3BG059900 Rh6BG145500 Rh6BG292400 Rh6DG129800 Rh7AG423900 Rh7AG431300 Rh7BG249300 Rh7BG404200 Rh7CG049400 Rh7CG444300 Rh7CG450000 Rh7DG420600
rosa_wichuraiana Rw0G000410 Rw0G007570 Rw0G011870 Rw1G018580 Rw1G018590 Rw1G018610 Rw1G018620 Rw1G018640 Rw1G019140 Rw1G019150 Rw1G019260 Rw1G019900 Rw1G026290 Rw1G026300 Rw1G026870 Rw1G026890 Rw1G033510 Rw1G035810 Rw1G035830 Rw1G035840 Rw1G035850 Rw1G035860 Rw3G004460 Rw5G038750 Rw7G035060 Rw7G035610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1967
Acc16I TGCGCA 1 cut(s) 621
AccII CGCG 1 cut(s) 1044
AccIII TCCGGA 1 cut(s) 148
AciI CCGC 2 cut(s) 909, 1042
AcoI YGGCCR 2 cut(s) 368, 1704
AcsI RAATTY 7 cut(s) 226, 235, 481, 807, 1094, 1145, 1617
AcuI CTGAAG 3 cut(s) 452, 524, 1488
AfaI GTAC 7 cut(s) 394, 995, 1194, 1314, 1596, 1654, 1696
AfeI AGCGCT 1 cut(s) 1601
AfiI CCNNNNNNNGG 5 cut(s) 760, 761, 1481, 2009, 2010
AflIII ACRYGT 1 cut(s) 1065
AjnI CCWGG 2 cut(s) 927, 1519
AjuI GAANNNNNNNTTGG 2 cut(s) 2101, 2133
AloI GAACNNNNNNTCC 2 cut(s) 793, 825
Alw21I GWGCWC 1 cut(s) 203
Alw26I GTCTC 4 cut(s) 565, 666, 726, 1457
AlwNI CAGNNNCTG 1 cut(s) 159
Ama87I CYCGRG 1 cut(s) 8
Aor13HI TCCGGA 1 cut(s) 148
Aor51HI AGCGCT 1 cut(s) 1601
AoxI GGCC 4 cut(s) 291, 368, 1140, 1704
ApeKI GCWGC 3 cut(s) 1350, 1575, 1954
ApoI RAATTY 7 cut(s) 226, 235, 481, 807, 1094, 1145, 1617
AseI ATTAAT 1 cut(s) 1104
Asp700I GAANNNNTTC 2 cut(s) 93, 549
AspLEI GCGC 3 cut(s) 622, 1556, 1602
AspS9I GGNCC 1 cut(s) 2105
AsuC2I CCSGG 1 cut(s) 290
AsuHPI GGTGA 5 cut(s) 1331, 1507, 1737, 1746, 1902
AvaI CYCGRG 1 cut(s) 8
AvaII GGWCC 1 cut(s) 2105
AxyI CCTNAGG 1 cut(s) 759
BaeGI GKGCMC 1 cut(s) 34
BalI TGGCCA 2 cut(s) 370, 1706
BanII GRGCYC 1 cut(s) 2098
BarI GAAGNNNNNNTAC 4 cut(s) 826, 858, 1176, 1208
BbsI GAAGAC 4 cut(s) 137, 834, 1191, 2030
Bbv12I GWGCWC 1 cut(s) 203
BbvI GCAGC 3 cut(s) 1337, 1562, 1966
BccI CCATC 7 cut(s) 47, 85, 379, 834, 1296, 1475, 1921
BceAI ACGGC 2 cut(s) 107, 563
BciT130I CCWGG 2 cut(s) 929, 1521
BclI TGATCA 2 cut(s) 1729, 1824
BcnI CCSGG 1 cut(s) 290
BcoDI GTCTC 4 cut(s) 565, 666, 726, 1457
BfaI CTAG 2 cut(s) 798, 1658
BfoI RGCGCY 1 cut(s) 1603
BglI GCCNNNNNGGC 1 cut(s) 1347
BisI GCNGC 3 cut(s) 1351, 1576, 1955
BlpI GCTNAGC 1 cut(s) 1354
BlsI GCNGC 3 cut(s) 1352, 1577, 1956
Bme1390I CCNGG 3 cut(s) 290, 929, 1521
Bme18I GGWCC 1 cut(s) 2105
BmeT110I CYCGRG 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 2105
BmiI GGNNCC 3 cut(s) 1305, 1340, 1860
BmrFI CCNGG 3 cut(s) 290, 929, 1521
BmrI ACTGGG 1 cut(s) 542
BmsI GCATC 7 cut(s) 415, 436, 671, 1218, 1239, 1724, 1828
BmuI ACTGGG 1 cut(s) 542
BpiI GAAGAC 4 cut(s) 137, 834, 1191, 2030
BplI GAGNNNNNCTC 2 cut(s) 1337, 1369
Bpu1102I GCTNAGC 1 cut(s) 1354
BpuEI CTTGAG 2 cut(s) 1364, 1908
BpuMI CCSGG 1 cut(s) 290
Bsa29I ATCGAT 1 cut(s) 377
BsaJI CCNNGG 4 cut(s) 927, 928, 1085, 1701
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 8 cut(s) 32, 62, 1101, 1131, 1668, 1698, 1767, 1797
Bsc4I CCNNNNNNNGG 5 cut(s) 760, 761, 1481, 2009, 2010
Bse1I ACTGG 5 cut(s) 277, 537, 1052, 1757, 1898
Bse21I CCTNAGG 1 cut(s) 759
Bse3DI GCAATG 3 cut(s) 450, 985, 1678
BseAI TCCGGA 1 cut(s) 148
BseBI CCWGG 2 cut(s) 929, 1521
BseCI ATCGAT 1 cut(s) 377
BseDI CCNNGG 4 cut(s) 927, 928, 1085, 1701
BseGI GGATG 5 cut(s) 77, 451, 822, 1279, 2019
BseLI CCNNNNNNNGG 5 cut(s) 760, 761, 1481, 2009, 2010
BseMI GCAATG 3 cut(s) 450, 985, 1678
BseMII CTCAG 7 cut(s) 213, 566, 773, 1128, 1320, 1368, 1955
BseNI ACTGG 5 cut(s) 277, 537, 1052, 1757, 1898
BseRI GAGGAG 4 cut(s) 747, 1415, 1418, 1548
BseSI GKGCMC 1 cut(s) 34
BseXI GCAGC 3 cut(s) 1337, 1562, 1966
BseYI CCCAGC 2 cut(s) 855, 1205
BsgI GTGCAG 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 1044
BshFI GGCC 4 cut(s) 293, 370, 1142, 1706
BshVI ATCGAT 1 cut(s) 377
BsiHKAI GWGCWC 1 cut(s) 203
BsiHKCI CYCGRG 1 cut(s) 8
BsiSI CCGG 2 cut(s) 149, 290
BslFI GGGAC 1 cut(s) 114
BslI CCNNNNNNNGG 5 cut(s) 760, 761, 1481, 2009, 2010
BsmAI GTCTC 4 cut(s) 565, 666, 726, 1457
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 4 cut(s) 293, 370, 1142, 1706
BsoBI CYCGRG 1 cut(s) 8
Bsp1286I GDGCHC 3 cut(s) 34, 203, 2098
Bsp13I TCCGGA 1 cut(s) 148
Bsp1407I TGTACA 1 cut(s) 1652
Bsp143I GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
Bsp1720I GCTNAGC 1 cut(s) 1354
Bsp19I CCATGG 1 cut(s) 1085
BspACI CCGC 2 cut(s) 909, 1042
BspANI GGCC 4 cut(s) 293, 370, 1142, 1706
BspCNI CTCAG 7 cut(s) 214, 567, 772, 1129, 1321, 1367, 1954
BspDI ATCGAT 1 cut(s) 377
BspEI TCCGGA 1 cut(s) 148
BspFNI CGCG 1 cut(s) 1044
BspHI TCATGA 1 cut(s) 1726
BspLI GGNNCC 3 cut(s) 1305, 1340, 1860
BspQI GCTCTTC 1 cut(s) 500
BsrDI GCAATG 3 cut(s) 450, 985, 1678
BsrGI TGTACA 1 cut(s) 1652
BsrI ACTGG 5 cut(s) 277, 537, 1052, 1757, 1898
BssECI CCNNGG 4 cut(s) 927, 928, 1085, 1701
BssMI GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
BssT1I CCWWGG 1 cut(s) 1085
Bst2UI CCWGG 2 cut(s) 929, 1521
Bst4CI ACNGT 7 cut(s) 155, 397, 660, 951, 998, 1034, 1169
Bst6I CTCTTC 1 cut(s) 500
BstAUI TGTACA 1 cut(s) 1652
BstC8I GCNNGC 3 cut(s) 512, 516, 1843
BstDEI CTNAG 8 cut(s) 222, 541, 575, 759, 1137, 1329, 1354, 1941
BstDSI CCRYGG 2 cut(s) 1085, 1701
BstF5I GGATG 5 cut(s) 77, 451, 822, 1279, 2019
BstFNI CGCG 1 cut(s) 1044
BstH2I RGCGCY 1 cut(s) 1603
BstHHI GCGC 3 cut(s) 622, 1556, 1602
BstKTI GATC 8 cut(s) 388, 581, 985, 1335, 1732, 1827, 1905, 1973
BstMAI GTCTC 4 cut(s) 565, 666, 726, 1457
BstMBI GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
BstMWI GCNNNNNNNGC 4 cut(s) 641, 1347, 1712, 2045
BstNI CCWGG 2 cut(s) 929, 1521
BstNSI RCATGY 1 cut(s) 1069
BstSCI CCNGG 3 cut(s) 288, 927, 1519
BstSLI GKGCMC 1 cut(s) 34
BstUI CGCG 1 cut(s) 1044
BstV1I GCAGC 3 cut(s) 1337, 1562, 1966
BstV2I GAAGAC 4 cut(s) 137, 834, 1191, 2030
BstXI CCANNNNNNTGG 1 cut(s) 870
Bsu15I ATCGAT 1 cut(s) 377
Bsu36I CCTNAGG 1 cut(s) 759
BsuRI GGCC 4 cut(s) 293, 370, 1142, 1706
BsuTUI ATCGAT 1 cut(s) 377
BtgI CCRYGG 2 cut(s) 1085, 1701
BtsCI GGATG 5 cut(s) 77, 451, 822, 1279, 2019
BtsI GCAGTG 2 cut(s) 64, 1372
BtsIMutI CAGTG 5 cut(s) 64, 1134, 1165, 1372, 1905
Cac8I GCNNGC 3 cut(s) 512, 516, 1843
CaiI CAGNNNCTG 1 cut(s) 159
CciI TCATGA 1 cut(s) 1726
CfoI GCGC 3 cut(s) 622, 1556, 1602
Cfr13I GGNCC 1 cut(s) 2105
ClaI ATCGAT 1 cut(s) 377
Csp6I GTAC 7 cut(s) 393, 994, 1193, 1313, 1595, 1653, 1695
CviAII CATG 9 cut(s) 366, 523, 1066, 1086, 1579, 1727, 1772, 1828, 2056
CviQI GTAC 7 cut(s) 393, 994, 1193, 1313, 1595, 1653, 1695
DdeI CTNAG 8 cut(s) 222, 541, 575, 759, 1137, 1329, 1354, 1941
DpnI GATC 8 cut(s) 387, 580, 984, 1334, 1731, 1826, 1904, 1972
DpnII GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
DraI TTTAAA 1 cut(s) 240
EaeI YGGCCR 2 cut(s) 368, 1704
Eam1104I CTCTTC 1 cut(s) 500
EarI CTCTTC 1 cut(s) 500
Eco130I CCWWGG 1 cut(s) 1085
Eco24I GRGCYC 1 cut(s) 2098
Eco47I GGWCC 1 cut(s) 2105
Eco47III AGCGCT 1 cut(s) 1601
Eco57I CTGAAG 3 cut(s) 452, 524, 1488
Eco81I CCTNAGG 1 cut(s) 759
Eco88I CYCGRG 1 cut(s) 8
EcoRII CCWGG 2 cut(s) 927, 1519
EcoT14I CCWWGG 1 cut(s) 1085
EcoT38I GRGCYC 1 cut(s) 2098
ErhI CCWWGG 1 cut(s) 1085
FaeI CATG 9 cut(s) 369, 526, 1069, 1089, 1582, 1730, 1775, 1831, 2059
FalI AAGNNNNNCTT 8 cut(s) 342, 374, 1605, 1637, 1633, 1665, 1917, 1949
FaqI GGGAC 1 cut(s) 114
FatI CATG 9 cut(s) 365, 522, 1065, 1085, 1578, 1726, 1771, 1827, 2055
FauI CCCGC 1 cut(s) 902
FbaI TGATCA 2 cut(s) 1729, 1824
Fnu4HI GCNGC 3 cut(s) 1351, 1576, 1955
FokI GGATG 5 cut(s) 64, 458, 809, 1286, 2026
FriOI GRGCYC 1 cut(s) 2098
Fsp4HI GCNGC 3 cut(s) 1351, 1576, 1955
FspAI RTGCGCAY 1 cut(s) 621
FspBI CTAG 2 cut(s) 798, 1658
FspI TGCGCA 1 cut(s) 621
GlaI GCGC 3 cut(s) 621, 1555, 1601
GluI GCNGC 3 cut(s) 1351, 1576, 1955
GsaI CCCAGC 2 cut(s) 859, 1209
HaeII RGCGCY 1 cut(s) 1603
HaeIII GGCC 4 cut(s) 293, 370, 1142, 1706
HapII CCGG 2 cut(s) 149, 290
HhaI GCGC 3 cut(s) 622, 1556, 1602
Hin1II CATG 9 cut(s) 369, 526, 1069, 1089, 1582, 1730, 1775, 1831, 2059
Hin6I GCGC 3 cut(s) 620, 1554, 1600
HinP1I GCGC 3 cut(s) 620, 1554, 1600
HincII GTYRAC 1 cut(s) 1930
HindII GTYRAC 1 cut(s) 1930
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 6 cut(s) 285, 526, 1251, 1539, 1921, 2117
HpaI GTTAAC 1 cut(s) 1930
HpaII CCGG 2 cut(s) 149, 290
HphI GGTGA 5 cut(s) 1331, 1507, 1737, 1746, 1902
Hpy166II GTNNAC 4 cut(s) 254, 467, 1655, 1930
Hpy8I GTNNAC 4 cut(s) 254, 467, 1655, 1930
HpyAV CCTTC 8 cut(s) 188, 427, 982, 1430, 1485, 1635, 1674, 1943
HpyCH4III ACNGT 7 cut(s) 155, 397, 660, 951, 998, 1034, 1169
HpyF10VI GCNNNNNNNGC 4 cut(s) 641, 1347, 1712, 2045
HpyF3I CTNAG 8 cut(s) 222, 541, 575, 759, 1137, 1329, 1354, 1941
Hsp92II CATG 9 cut(s) 369, 526, 1069, 1089, 1582, 1730, 1775, 1831, 2059
HspAI GCGC 3 cut(s) 620, 1554, 1600
Kpn2I TCCGGA 1 cut(s) 148
Ksp22I TGATCA 2 cut(s) 1729, 1824
KspAI GTTAAC 1 cut(s) 1930
Kzo9I GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
LguI GCTCTTC 1 cut(s) 500
LmnI GCTCC 6 cut(s) 40, 1338, 1405, 1523, 1561, 1607
Lsp1109I GCAGC 3 cut(s) 1337, 1562, 1966
LweI GCATC 7 cut(s) 415, 436, 671, 1218, 1239, 1724, 1828
MaeI CTAG 2 cut(s) 798, 1658
MalI GATC 8 cut(s) 387, 580, 984, 1334, 1731, 1826, 1904, 1972
MboI GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
MboII GAAGA 9 cut(s) 32, 137, 330, 395, 517, 572, 834, 1196, 2035
MfeI CAATTG 3 cut(s) 84, 554, 1992
MhlI GDGCHC 3 cut(s) 34, 203, 2098
MlsI TGGCCA 2 cut(s) 370, 1706
MluNI TGGCCA 2 cut(s) 370, 1706
MlyI GAGTC 3 cut(s) 279, 1548, 1915
MmeI TCCRAC 2 cut(s) 1549, 2145
Mox20I TGGCCA 2 cut(s) 370, 1706
MroI TCCGGA 1 cut(s) 148
MroXI GAANNNNTTC 2 cut(s) 93, 549
MscI TGGCCA 2 cut(s) 370, 1706
MslI CAYNNNNRTG 2 cut(s) 1070, 2012
Msp20I TGGCCA 2 cut(s) 370, 1706
MspA1I CMGCKG 2 cut(s) 709, 1358
MspI CCGG 2 cut(s) 149, 290
MspR9I CCNGG 3 cut(s) 290, 929, 1521
MunI CAATTG 3 cut(s) 84, 554, 1992
MvaI CCWGG 2 cut(s) 929, 1521
MvnI CGCG 1 cut(s) 1044
MwoI GCNNNNNNNGC 4 cut(s) 641, 1347, 1712, 2045
NciI CCSGG 1 cut(s) 290
NcoI CCATGG 1 cut(s) 1085
NdeII GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
NlaIII CATG 9 cut(s) 369, 526, 1069, 1089, 1582, 1730, 1775, 1831, 2059
NlaIV GGNNCC 3 cut(s) 1305, 1340, 1860
NmuCI GTSAC 4 cut(s) 1220, 1373, 1385, 2068
NsbI TGCGCA 1 cut(s) 621
NspI RCATGY 1 cut(s) 1069
PagI TCATGA 1 cut(s) 1726
PasI CCCWGGG 1 cut(s) 928
PciI ACATGT 1 cut(s) 1065
PciSI GCTCTTC 1 cut(s) 500
PdmI GAANNNNTTC 2 cut(s) 93, 549
PfeI GAWTC 3 cut(s) 526, 1251, 2117
PflFI GACNNNGTC 1 cut(s) 2029
PkrI GCNGC 3 cut(s) 1352, 1577, 1956
PleI GAGTC 3 cut(s) 279, 1547, 1915
PpsI GAGTC 3 cut(s) 279, 1547, 1915
PscI ACATGT 1 cut(s) 1065
PshBI ATTAAT 1 cut(s) 1104
PsiI TTATAA 1 cut(s) 1967
Psp6I CCWGG 2 cut(s) 927, 1519
PspFI CCCAGC 2 cut(s) 855, 1205
PspGI CCWGG 2 cut(s) 927, 1519
PspN4I GGNNCC 3 cut(s) 1305, 1340, 1860
PspPI GGNCC 1 cut(s) 2105
PsrI GAACNNNNNNTAC 2 cut(s) 1296, 1328
PstNI CAGNNNCTG 1 cut(s) 159
PsyI GACNNNGTC 1 cut(s) 2029
PvuII CAGCTG 2 cut(s) 709, 1358
RsaI GTAC 7 cut(s) 394, 995, 1194, 1314, 1596, 1654, 1696
RsaNI GTAC 7 cut(s) 393, 994, 1193, 1313, 1595, 1653, 1695
RseI CAYNNNNRTG 2 cut(s) 1070, 2012
SapI GCTCTTC 1 cut(s) 500
SatI GCNGC 3 cut(s) 1351, 1576, 1955
Sau3AI GATC 8 cut(s) 385, 578, 982, 1332, 1729, 1824, 1902, 1970
Sau96I GGNCC 1 cut(s) 2105
SchI GAGTC 3 cut(s) 279, 1548, 1915
ScrFI CCNGG 3 cut(s) 290, 929, 1521
SduI GDGCHC 3 cut(s) 34, 203, 2098
SfaNI GCATC 7 cut(s) 415, 436, 671, 1218, 1239, 1724, 1828
SinI GGWCC 1 cut(s) 2105
SmiMI CAYNNNNRTG 2 cut(s) 1070, 2012
SmlI CTYRAG 2 cut(s) 1343, 1923
SmoI CTYRAG 2 cut(s) 1343, 1923
SsiI CCGC 2 cut(s) 909, 1042
SspI AATATT 1 cut(s) 1021
SspMI CTAG 2 cut(s) 798, 1658
StyD4I CCNGG 3 cut(s) 288, 927, 1519
StyI CCWWGG 1 cut(s) 1085
TaaI ACNGT 7 cut(s) 155, 397, 660, 951, 998, 1034, 1169
TaqI TCGA 8 cut(s) 192, 377, 679, 958, 1212, 1233, 1249, 1718
TatI WGTACW 3 cut(s) 392, 1594, 1652
TfiI GAWTC 3 cut(s) 526, 1251, 2117
TscAI CASTG 5 cut(s) 64, 1141, 1172, 1372, 1905
TseFI GTSAC 4 cut(s) 1220, 1373, 1385, 2068
TseI GCWGC 3 cut(s) 1350, 1575, 1954
Tsp45I GTSAC 4 cut(s) 1220, 1373, 1385, 2068
TspGWI ACGGA 2 cut(s) 835, 1690
TspRI CASTG 5 cut(s) 64, 1141, 1172, 1372, 1905
Tth111I GACNNNGTC 1 cut(s) 2029
VpaK11BI GGWCC 1 cut(s) 2105
VspI ATTAAT 1 cut(s) 1104
XapI RAATTY 7 cut(s) 226, 235, 481, 807, 1094, 1145, 1617
XceI RCATGY 1 cut(s) 1069
XcmI CCANNNNNNNNNTGG 2 cut(s) 529, 1295
XmnI GAANNNNTTC 2 cut(s) 93, 549
XspI CTAG 2 cut(s) 798, 1658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.