TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 185 | 6.1e-54 | TIR domain |
| TIR_2 | PF13676 | 19 - 114 | 2.3e-14 | TIR domain |
| NB-ARC | PF00931 | 198 - 349 | 3.7e-11 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 420 - 488 | 3.4e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 666 - 785 | 5e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 757 - 840 | 1.8e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 785 - 857 | 5.1e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 822 - 884 | 1.7e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 1035 - 1193 | 6e-16 | C-JID domain |
| WRKY | PF03106 | 1291 - 1350 | 3e-06 | WRKY DNA -binding domain |
| WRKY | PF03106 | 1376 - 1433 | 3.8e-17 | WRKY DNA -binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 4382 |
| Acc16I | TGCGCA | 1 cut(s) | 2931 |
| AccBSI | CCGCTC | 1 cut(s) | 1708 |
| AccII | CGCG | 2 cut(s) | 245, 3354 |
| AccIII | TCCGGA | 1 cut(s) | 2458 |
| AciI | CCGC | 8 cut(s) | 403, 441, 456, 621, 666, 1708, 3352, 3942 |
| AclI | AACGTT | 1 cut(s) | 910 |
| AclWI | GGATC | 5 cut(s) | 192, 332, 432, 557, 998 |
| AcoI | YGGCCR | 3 cut(s) | 1700, 2678, 4350 |
| AcuI | CTGAAG | 7 cut(s) | 146, 745, 1024, 1617, 2762, 2834, 4134 |
| AdeI | CACNNNGTG | 3 cut(s) | 258, 1219, 1228 |
| AfeI | AGCGCT | 1 cut(s) | 4247 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 409, 447, 690, 874, 3070, 3071, 3920, 3972, 4127 |
| AflII | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| AflIII | ACRYGT | 2 cut(s) | 1585, 3375 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4116 |
| AhlI | ACTAGT | 1 cut(s) | 3692 |
| AjiI | CACGTC | 1 cut(s) | 1085 |
| AjnI | CCWGG | 7 cut(s) | 689, 1127, 3106, 3237, 3867, 4165, 4402 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 895, 900, 927, 932, 1160, 1192 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3103, 3135 |
| Alw21I | GWGCWC | 6 cut(s) | 507, 1138, 1224, 1390, 1419, 2513 |
| Alw26I | GTCTC | 3 cut(s) | 2875, 2976, 4103 |
| Alw44I | GTGCAC | 1 cut(s) | 1220 |
| AlwI | GGATC | 5 cut(s) | 192, 332, 432, 557, 998 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2469 |
| Ama87I | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| Aor13HI | TCCGGA | 1 cut(s) | 2458 |
| Aor51HI | AGCGCT | 1 cut(s) | 4247 |
| AoxI | GGCC | 7 cut(s) | 1700, 2056, 2601, 2678, 3450, 3975, 4350 |
| ApaLI | GTGCAC | 1 cut(s) | 1220 |
| ApeKI | GCWGC | 7 cut(s) | 623, 1907, 2154, 2295, 2828, 3660, 4221 |
| AseI | ATTAAT | 1 cut(s) | 3414 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1037, 1329, 1506, 2262, 2403, 2859 |
| AspLEI | GCGC | 5 cut(s) | 628, 1981, 2932, 4202, 4248 |
| AspS9I | GGNCC | 5 cut(s) | 4, 1759, 3865, 3975, 4118 |
| AsuC2I | CCSGG | 2 cut(s) | 2600, 3966 |
| AsuHPI | GGTGA | 7 cut(s) | 719, 1205, 1424, 3641, 4153, 4383, 4392 |
| AvaI | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| AvaII | GGWCC | 4 cut(s) | 4, 1759, 3865, 4118 |
| AxyI | CCTNAGG | 1 cut(s) | 3069 |
| BaeGI | GKGCMC | 2 cut(s) | 1224, 2344 |
| BalI | TGGCCA | 2 cut(s) | 2680, 4352 |
| BanII | GRGCYC | 4 cut(s) | 507, 1138, 1390, 1419 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 3136, 3168, 3486, 3518 |
| BbsI | GAAGAC | 6 cut(s) | 49, 84, 2093, 2447, 3144, 3501 |
| Bbv12I | GWGCWC | 6 cut(s) | 507, 1138, 1224, 1390, 1419, 2513 |
| BbvI | GCAGC | 7 cut(s) | 610, 1894, 2141, 2282, 2840, 3647, 4208 |
| BceAI | ACGGC | 5 cut(s) | 1810, 2276, 2308, 2417, 2873 |
| BciT130I | CCWGG | 7 cut(s) | 691, 1129, 3108, 3239, 3869, 4167, 4404 |
| BciVI | GTATCC | 2 cut(s) | 874, 1507 |
| BclI | TGATCA | 2 cut(s) | 724, 4534 |
| BcnI | CCSGG | 2 cut(s) | 2600, 3966 |
| BcoDI | GTCTC | 3 cut(s) | 2875, 2976, 4103 |
| BcuI | ACTAGT | 1 cut(s) | 3692 |
| BfaI | CTAG | 8 cut(s) | 845, 948, 965, 1205, 1253, 1280, 3693, 4304 |
| BfmI | CTRYAG | 2 cut(s) | 1436, 2826 |
| BfoI | RGCGCY | 1 cut(s) | 4249 |
| BfrI | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| BfuI | GTATCC | 2 cut(s) | 874, 1507 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3657 |
| BisI | GCNGC | 9 cut(s) | 456, 624, 667, 1908, 2155, 2296, 2829, 3661, 4222 |
| BlpI | GCTNAGC | 1 cut(s) | 3664 |
| BlsI | GCNGC | 9 cut(s) | 457, 625, 668, 1909, 2156, 2297, 2830, 3662, 4223 |
| BmcAI | AGTACT | 1 cut(s) | 963 |
| Bme1390I | CCNGG | 9 cut(s) | 691, 1129, 2600, 3108, 3239, 3869, 3966, 4167, 4404 |
| Bme18I | GGWCC | 4 cut(s) | 4, 1759, 3865, 4118 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4116 |
| BmeT110I | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| BmgBI | CACGTC | 1 cut(s) | 1085 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 1759, 3865, 3975, 4118 |
| BmiI | GGNNCC | 5 cut(s) | 1760, 3615, 3650, 3866, 4408 |
| BmrFI | CCNGG | 9 cut(s) | 691, 1129, 2600, 3108, 3239, 3869, 3966, 4167, 4404 |
| BmrI | ACTGGG | 1 cut(s) | 2852 |
| BmuI | ACTGGG | 1 cut(s) | 2852 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1152, 1866 |
| BpiI | GAAGAC | 6 cut(s) | 49, 84, 2093, 2447, 3144, 3501 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3647, 3679, 3796, 3828 |
| BpmI | CTGGAG | 1 cut(s) | 454 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2213 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3664 |
| BpuEI | CTTGAG | 7 cut(s) | 1063, 1387, 2089, 2117, 2186, 2327, 3674 |
| BpuMI | CCSGG | 2 cut(s) | 2600, 3966 |
| Bsa29I | ATCGAT | 1 cut(s) | 2687 |
| BsaAI | YACGTR | 1 cut(s) | 560 |
| BsaBI | GATNNNNATC | 2 cut(s) | 591, 1925 |
| BsaJI | CCNNGG | 9 cut(s) | 690, 873, 1128, 1472, 1902, 3237, 3238, 3395, 4347 |
| BsaWI | WCCGGW | 1 cut(s) | 2458 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 409, 447, 690, 874, 3070, 3071, 3920, 3972, 4127 |
| Bse1I | ACTGG | 5 cut(s) | 276, 2587, 2847, 3362, 3890 |
| Bse21I | CCTNAGG | 1 cut(s) | 3069 |
| Bse3DI | GCAATG | 6 cut(s) | 198, 588, 684, 2760, 3295, 4324 |
| Bse8I | GATNNNNATC | 2 cut(s) | 591, 1925 |
| BseAI | TCCGGA | 1 cut(s) | 2458 |
| BseBI | CCWGG | 7 cut(s) | 691, 1129, 3108, 3239, 3869, 4167, 4404 |
| BseCI | ATCGAT | 1 cut(s) | 2687 |
| BseDI | CCNNGG | 9 cut(s) | 690, 873, 1128, 1472, 1902, 3237, 3238, 3395, 4347 |
| BseGI | GGATG | 8 cut(s) | 499, 2036, 2246, 2387, 2761, 3132, 3589, 3877 |
| BseJI | GATNNNNATC | 2 cut(s) | 591, 1925 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 409, 447, 690, 874, 3070, 3071, 3920, 3972, 4127 |
| BseMI | GCAATG | 6 cut(s) | 198, 588, 684, 2760, 3295, 4324 |
| BseNI | ACTGG | 5 cut(s) | 276, 2587, 2847, 3362, 3890 |
| BseRI | GAGGAG | 5 cut(s) | 3057, 3725, 3728, 4194, 4563 |
| BseSI | GKGCMC | 2 cut(s) | 1224, 2344 |
| BseXI | GCAGC | 7 cut(s) | 610, 1894, 2141, 2282, 2840, 3647, 4208 |
| BseYI | CCCAGC | 3 cut(s) | 471, 3165, 3515 |
| BsgI | GTGCAG | 5 cut(s) | 296, 446, 1954, 2422, 4512 |
| Bsh1236I | CGCG | 2 cut(s) | 245, 3354 |
| Bsh1285I | CGRYCG | 2 cut(s) | 403, 2989 |
| BshFI | GGCC | 7 cut(s) | 1702, 2058, 2603, 2680, 3452, 3977, 4352 |
| BshVI | ATCGAT | 1 cut(s) | 2687 |
| BsiEI | CGRYCG | 2 cut(s) | 403, 2989 |
| BsiHKAI | GWGCWC | 6 cut(s) | 507, 1138, 1224, 1390, 1419, 2513 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| BsiSI | CCGG | 5 cut(s) | 1703, 2151, 2459, 2600, 3966 |
| BslFI | GGGAC | 6 cut(s) | 621, 1772, 2017, 2283, 2424, 3878 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 409, 447, 690, 874, 3070, 3071, 3920, 3972, 4127 |
| BsmAI | GTCTC | 3 cut(s) | 2875, 2976, 4103 |
| BsmFI | GGGAC | 6 cut(s) | 621, 1772, 2017, 2283, 2424, 3878 |
| BsmI | GAATGC | 4 cut(s) | 293, 1039, 1311, 4555 |
| BsnI | GGCC | 7 cut(s) | 1702, 2058, 2603, 2680, 3452, 3977, 4352 |
| BsoBI | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| Bsp1286I | GDGCHC | 7 cut(s) | 507, 1138, 1224, 1390, 1419, 2344, 2513 |
| Bsp13I | TCCGGA | 1 cut(s) | 2458 |
| Bsp1407I | TGTACA | 3 cut(s) | 2012, 3953, 4298 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3664 |
| Bsp19I | CCATGG | 1 cut(s) | 3395 |
| BspACI | CCGC | 8 cut(s) | 403, 441, 456, 621, 666, 1708, 3352, 3942 |
| BspANI | GGCC | 7 cut(s) | 1702, 2058, 2603, 2680, 3452, 3977, 4352 |
| BspDI | ATCGAT | 1 cut(s) | 2687 |
| BspEI | TCCGGA | 1 cut(s) | 2458 |
| BspFNI | CGCG | 2 cut(s) | 245, 3354 |
| BspHI | TCATGA | 1 cut(s) | 4372 |
| BspLI | GGNNCC | 5 cut(s) | 1760, 3615, 3650, 3866, 4408 |
| BspMAI | CTGCAG | 1 cut(s) | 2830 |
| BspPI | GGATC | 5 cut(s) | 192, 332, 432, 557, 998 |
| BspQI | GCTCTTC | 1 cut(s) | 2810 |
| BspTI | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| BsrBI | CCGCTC | 1 cut(s) | 1708 |
| BsrDI | GCAATG | 6 cut(s) | 198, 588, 684, 2760, 3295, 4324 |
| BsrGI | TGTACA | 3 cut(s) | 2012, 3953, 4298 |
| BsrI | ACTGG | 5 cut(s) | 276, 2587, 2847, 3362, 3890 |
| BssECI | CCNNGG | 9 cut(s) | 690, 873, 1128, 1472, 1902, 3237, 3238, 3395, 4347 |
| BssT1I | CCWWGG | 4 cut(s) | 873, 1472, 1902, 3395 |
| Bst2UI | CCWGG | 7 cut(s) | 691, 1129, 3108, 3239, 3869, 4167, 4404 |
| Bst6I | CTCTTC | 6 cut(s) | 22, 1028, 1056, 2810, 3797, 4065 |
| BstAFI | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1228 |
| BstAUI | TGTACA | 3 cut(s) | 2012, 3953, 4298 |
| BstBAI | YACGTR | 1 cut(s) | 560 |
| BstC8I | GCNNGC | 5 cut(s) | 1357, 2822, 2826, 4489, 4516 |
| BstDSI | CCRYGG | 2 cut(s) | 3395, 4347 |
| BstEII | GGTNACC | 1 cut(s) | 1718 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3918 |
| BstF5I | GGATG | 8 cut(s) | 499, 2036, 2246, 2387, 2761, 3132, 3589, 3877 |
| BstFNI | CGCG | 2 cut(s) | 245, 3354 |
| BstH2I | RGCGCY | 1 cut(s) | 4249 |
| BstHHI | GCGC | 5 cut(s) | 628, 1981, 2932, 4202, 4248 |
| BstMAI | GTCTC | 3 cut(s) | 2875, 2976, 4103 |
| BstMCI | CGRYCG | 2 cut(s) | 403, 2989 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 99, 511, 1228, 2951, 3657, 4358 |
| BstNI | CCWGG | 7 cut(s) | 691, 1129, 3108, 3239, 3869, 4167, 4404 |
| BstNSI | RCATGY | 5 cut(s) | 1293, 1589, 1867, 3379, 4518 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1152, 1866 |
| BstPI | GGTNACC | 1 cut(s) | 1718 |
| BstSCI | CCNGG | 9 cut(s) | 689, 1127, 2598, 3106, 3237, 3867, 3964, 4165, 4402 |
| BstSFI | CTRYAG | 2 cut(s) | 1436, 2826 |
| BstSLI | GKGCMC | 2 cut(s) | 1224, 2344 |
| BstUI | CGCG | 2 cut(s) | 245, 3354 |
| BstV1I | GCAGC | 7 cut(s) | 610, 1894, 2141, 2282, 2840, 3647, 4208 |
| BstV2I | GAAGAC | 6 cut(s) | 49, 84, 2093, 2447, 3144, 3501 |
| BstX2I | RGATCY | 4 cut(s) | 184, 337, 437, 549 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 118, 1164, 3180 |
| BstYI | RGATCY | 4 cut(s) | 184, 337, 437, 549 |
| Bsu15I | ATCGAT | 1 cut(s) | 2687 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3069 |
| BsuI | GTATCC | 2 cut(s) | 874, 1507 |
| BsuRI | GGCC | 7 cut(s) | 1702, 2058, 2603, 2680, 3452, 3977, 4352 |
| BsuTUI | ATCGAT | 1 cut(s) | 2687 |
| BtgI | CCRYGG | 2 cut(s) | 3395, 4347 |
| BtrI | CACGTC | 1 cut(s) | 1085 |
| BtsCI | GGATG | 8 cut(s) | 499, 2036, 2246, 2387, 2761, 3132, 3589, 3877 |
| BtsI | GCAGTG | 4 cut(s) | 1366, 2226, 2374, 3682 |
| BtsIMutI | CAGTG | 8 cut(s) | 1366, 1971, 2085, 2226, 2374, 3444, 3475, 3682 |
| Cac8I | GCNNGC | 5 cut(s) | 1357, 2822, 2826, 4489, 4516 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2469 |
| CciI | TCATGA | 1 cut(s) | 4372 |
| CfoI | GCGC | 5 cut(s) | 628, 1981, 2932, 4202, 4248 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 1759, 3865, 3975, 4118 |
| ClaI | ATCGAT | 1 cut(s) | 2687 |
| CseI | GACGC | 2 cut(s) | 1019, 1856 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2004, 2039 |
| DraI | TTTAAA | 1 cut(s) | 2550 |
| DraIII | CACNNNGTG | 3 cut(s) | 258, 1219, 1228 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4382 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4116 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4382 |
| EaeI | YGGCCR | 3 cut(s) | 1700, 2678, 4350 |
| Eam1104I | CTCTTC | 6 cut(s) | 22, 1028, 1056, 2810, 3797, 4065 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4116 |
| EarI | CTCTTC | 6 cut(s) | 22, 1028, 1056, 2810, 3797, 4065 |
| Ecl136II | GAGCTC | 4 cut(s) | 505, 1136, 1388, 1417 |
| Eco130I | CCWWGG | 4 cut(s) | 873, 1472, 1902, 3395 |
| Eco147I | AGGCCT | 1 cut(s) | 2058 |
| Eco24I | GRGCYC | 4 cut(s) | 507, 1138, 1390, 1419 |
| Eco32I | GATATC | 3 cut(s) | 1285, 1456, 2983 |
| Eco47I | GGWCC | 4 cut(s) | 4, 1759, 3865, 4118 |
| Eco47III | AGCGCT | 1 cut(s) | 4247 |
| Eco53kI | GAGCTC | 4 cut(s) | 505, 1136, 1388, 1417 |
| Eco57I | CTGAAG | 7 cut(s) | 146, 745, 1024, 1617, 2762, 2834, 4134 |
| Eco81I | CCTNAGG | 1 cut(s) | 3069 |
| Eco88I | CYCGRG | 3 cut(s) | 1418, 2177, 2318 |
| Eco91I | GGTNACC | 1 cut(s) | 1718 |
| EcoICRI | GAGCTC | 4 cut(s) | 505, 1136, 1388, 1417 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3918 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1759, 3865, 4118 |
| EcoO65I | GGTNACC | 1 cut(s) | 1718 |
| EcoRII | CCWGG | 7 cut(s) | 689, 1127, 3106, 3237, 3867, 4165, 4402 |
| EcoRV | GATATC | 3 cut(s) | 1285, 1456, 2983 |
| EcoT14I | CCWWGG | 4 cut(s) | 873, 1472, 1902, 3395 |
| EcoT22I | ATGCAT | 1 cut(s) | 4557 |
| EcoT38I | GRGCYC | 4 cut(s) | 507, 1138, 1390, 1419 |
| ErhI | CCWWGG | 4 cut(s) | 873, 1472, 1902, 3395 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2652, 2684, 4251, 4283, 4279, 4311 |
| FaqI | GGGAC | 6 cut(s) | 621, 1772, 2017, 2283, 2424, 3878 |
| FauI | CCCGC | 1 cut(s) | 3935 |
| FauNDI | CATATG | 2 cut(s) | 1651, 2118 |
| FbaI | TGATCA | 2 cut(s) | 724, 4534 |
| Fnu4HI | GCNGC | 9 cut(s) | 456, 624, 667, 1908, 2155, 2296, 2829, 3661, 4222 |
| FokI | GGATG | 8 cut(s) | 506, 2023, 2233, 2374, 2768, 3119, 3596, 3884 |
| FriOI | GRGCYC | 4 cut(s) | 507, 1138, 1390, 1419 |
| Fsp4HI | GCNGC | 9 cut(s) | 456, 624, 667, 1908, 2155, 2296, 2829, 3661, 4222 |
| FspAI | RTGCGCAY | 1 cut(s) | 2931 |
| FspBI | CTAG | 8 cut(s) | 845, 948, 965, 1205, 1253, 1280, 3693, 4304 |
| FspI | TGCGCA | 1 cut(s) | 2931 |
| GlaI | GCGC | 5 cut(s) | 627, 1980, 2931, 4201, 4247 |
| GluI | GCNGC | 9 cut(s) | 456, 624, 667, 1908, 2155, 2296, 2829, 3661, 4222 |
| GsaI | CCCAGC | 3 cut(s) | 475, 3169, 3519 |
| GsuI | CTGGAG | 1 cut(s) | 454 |
| HaeII | RGCGCY | 1 cut(s) | 4249 |
| HaeIII | GGCC | 7 cut(s) | 1702, 2058, 2603, 2680, 3452, 3977, 4352 |
| HapII | CCGG | 5 cut(s) | 1703, 2151, 2459, 2600, 3966 |
| HgaI | GACGC | 2 cut(s) | 1019, 1856 |
| HhaI | GCGC | 5 cut(s) | 628, 1981, 2932, 4202, 4248 |
| Hin6I | GCGC | 5 cut(s) | 626, 1979, 2930, 4200, 4246 |
| HinP1I | GCGC | 5 cut(s) | 626, 1979, 2930, 4200, 4246 |
| HincII | GTYRAC | 2 cut(s) | 1855, 4077 |
| HindII | GTYRAC | 2 cut(s) | 1855, 4077 |
| HindIII | AAGCTT | 5 cut(s) | 212, 378, 1240, 1599, 2621 |
| HpaII | CCGG | 5 cut(s) | 1703, 2151, 2459, 2600, 3966 |
| HphI | GGTGA | 7 cut(s) | 719, 1205, 1424, 3641, 4153, 4383, 4392 |
| Hpy99I | CGWCG | 2 cut(s) | 860, 1739 |
| HpyCH4IV | ACGT | 4 cut(s) | 559, 910, 1068, 1084 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 99, 511, 1228, 2951, 3657, 4358 |
| HpySE526I | ACGT | 4 cut(s) | 559, 910, 1068, 1084 |
| HspAI | GCGC | 5 cut(s) | 626, 1979, 2930, 4200, 4246 |
| Kpn2I | TCCGGA | 1 cut(s) | 2458 |
| Ksp22I | TGATCA | 2 cut(s) | 724, 4534 |
| LguI | GCTCTTC | 1 cut(s) | 2810 |
| Lsp1109I | GCAGC | 7 cut(s) | 610, 1894, 2141, 2282, 2840, 3647, 4208 |
| MaeI | CTAG | 8 cut(s) | 845, 948, 965, 1205, 1253, 1280, 3693, 4304 |
| MaeII | ACGT | 4 cut(s) | 559, 910, 1068, 1084 |
| MbiI | CCGCTC | 1 cut(s) | 1708 |
| MfeI | CAATTG | 3 cut(s) | 2253, 2394, 2864 |
| MflI | RGATCY | 4 cut(s) | 184, 337, 437, 549 |
| MhlI | GDGCHC | 7 cut(s) | 507, 1138, 1224, 1390, 1419, 2344, 2513 |
| MlsI | TGGCCA | 2 cut(s) | 2680, 4352 |
| MluNI | TGGCCA | 2 cut(s) | 2680, 4352 |
| MlyI | GAGTC | 4 cut(s) | 1565, 2107, 2589, 4194 |
| MmeI | TCCRAC | 8 cut(s) | 504, 628, 812, 1158, 1854, 3803, 4031, 4195 |
| Mox20I | TGGCCA | 2 cut(s) | 2680, 4352 |
| Mph1103I | ATGCAT | 1 cut(s) | 4557 |
| MroI | TCCGGA | 1 cut(s) | 2458 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1037, 1329, 1506, 2262, 2403, 2859 |
| MscI | TGGCCA | 2 cut(s) | 2680, 4352 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1143, 1162, 1590, 1752, 2117, 3380, 4542 |
| Msp20I | TGGCCA | 2 cut(s) | 2680, 4352 |
| MspA1I | CMGCKG | 3 cut(s) | 623, 3019, 3668 |
| MspCI | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| MspI | CCGG | 5 cut(s) | 1703, 2151, 2459, 2600, 3966 |
| MspR9I | CCNGG | 9 cut(s) | 691, 1129, 2600, 3108, 3239, 3869, 3966, 4167, 4404 |
| MunI | CAATTG | 3 cut(s) | 2253, 2394, 2864 |
| Mva1269I | GAATGC | 4 cut(s) | 293, 1039, 1311, 4555 |
| MvaI | CCWGG | 7 cut(s) | 691, 1129, 3108, 3239, 3869, 4167, 4404 |
| MvnI | CGCG | 2 cut(s) | 245, 3354 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 99, 511, 1228, 2951, 3657, 4358 |
| NciI | CCSGG | 2 cut(s) | 2600, 3966 |
| NcoI | CCATGG | 1 cut(s) | 3395 |
| NdeI | CATATG | 2 cut(s) | 1651, 2118 |
| NlaIV | GGNNCC | 5 cut(s) | 1760, 3615, 3650, 3866, 4408 |
| NmeAIII | GCCGAG | 1 cut(s) | 526 |
| NmuCI | GTSAC | 4 cut(s) | 1145, 3530, 3683, 3695 |
| NsbI | TGCGCA | 1 cut(s) | 2931 |
| NsiI | ATGCAT | 1 cut(s) | 4557 |
| NspI | RCATGY | 5 cut(s) | 1293, 1589, 1867, 3379, 4518 |
| PaeI | GCATGC | 1 cut(s) | 4518 |
| PaeR7I | CTCGAG | 1 cut(s) | 1418 |
| PagI | TCATGA | 1 cut(s) | 4372 |
| PasI | CCCWGGG | 1 cut(s) | 3238 |
| PceI | AGGCCT | 1 cut(s) | 2058 |
| PciI | ACATGT | 2 cut(s) | 1585, 3375 |
| PciSI | GCTCTTC | 1 cut(s) | 2810 |
| PctI | GAATGC | 4 cut(s) | 293, 1039, 1311, 4555 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1037, 1329, 1506, 2262, 2403, 2859 |
| PfeI | GAWTC | 9 cut(s) | 206, 476, 587, 651, 807, 1635, 2836, 3561, 3791 |
| PfoI | TCCNGGA | 1 cut(s) | 3106 |
| PkrI | GCNGC | 9 cut(s) | 457, 625, 668, 1909, 2156, 2297, 2830, 3662, 4223 |
| PleI | GAGTC | 4 cut(s) | 1565, 2106, 2589, 4193 |
| PpsI | GAGTC | 4 cut(s) | 1565, 2106, 2589, 4193 |
| Ppu21I | YACGTR | 1 cut(s) | 560 |
| PpuMI | RGGWCCY | 3 cut(s) | 1759, 3865, 4118 |
| PscI | ACATGT | 2 cut(s) | 1585, 3375 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1152, 1866 |
| PshBI | ATTAAT | 1 cut(s) | 3414 |
| Psp124BI | GAGCTC | 4 cut(s) | 507, 1138, 1390, 1419 |
| Psp1406I | AACGTT | 1 cut(s) | 910 |
| Psp5II | RGGWCCY | 3 cut(s) | 1759, 3865, 4118 |
| Psp6I | CCWGG | 7 cut(s) | 689, 1127, 3106, 3237, 3867, 4165, 4402 |
| PspEI | GGTNACC | 1 cut(s) | 1718 |
| PspFI | CCCAGC | 3 cut(s) | 471, 3165, 3515 |
| PspGI | CCWGG | 7 cut(s) | 689, 1127, 3106, 3237, 3867, 4165, 4402 |
| PspN4I | GGNNCC | 5 cut(s) | 1760, 3615, 3650, 3866, 4408 |
| PspPI | GGNCC | 5 cut(s) | 4, 1759, 3865, 3975, 4118 |
| PspPPI | RGGWCCY | 3 cut(s) | 1759, 3865, 4118 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3606, 3638 |
| PstI | CTGCAG | 1 cut(s) | 2830 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2469 |
| PsuI | RGATCY | 4 cut(s) | 184, 337, 437, 549 |
| PvuII | CAGCTG | 2 cut(s) | 3019, 3668 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1143, 1162, 1590, 1752, 2117, 3380, 4542 |
| SacI | GAGCTC | 4 cut(s) | 507, 1138, 1390, 1419 |
| SapI | GCTCTTC | 1 cut(s) | 2810 |
| SatI | GCNGC | 9 cut(s) | 456, 624, 667, 1908, 2155, 2296, 2829, 3661, 4222 |
| Sau96I | GGNCC | 5 cut(s) | 4, 1759, 3865, 3975, 4118 |
| ScaI | AGTACT | 1 cut(s) | 963 |
| SchI | GAGTC | 4 cut(s) | 1565, 2107, 2589, 4194 |
| ScrFI | CCNGG | 9 cut(s) | 691, 1129, 2600, 3108, 3239, 3869, 3966, 4167, 4404 |
| SduI | GDGCHC | 7 cut(s) | 507, 1138, 1224, 1390, 1419, 2344, 2513 |
| SfcI | CTRYAG | 2 cut(s) | 1436, 2826 |
| Sfr274I | CTCGAG | 1 cut(s) | 1418 |
| SinI | GGWCC | 4 cut(s) | 4, 1759, 3865, 4118 |
| SlaI | CTCGAG | 1 cut(s) | 1418 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1143, 1162, 1590, 1752, 2117, 3380, 4542 |
| SpeI | ACTAGT | 1 cut(s) | 3692 |
| SphI | GCATGC | 1 cut(s) | 4518 |
| SseBI | AGGCCT | 1 cut(s) | 2058 |
| SsiI | CCGC | 8 cut(s) | 403, 441, 456, 621, 666, 1708, 3352, 3942 |
| SspI | AATATT | 1 cut(s) | 3331 |
| SspMI | CTAG | 8 cut(s) | 845, 948, 965, 1205, 1253, 1280, 3693, 4304 |
| SstI | GAGCTC | 4 cut(s) | 507, 1138, 1390, 1419 |
| StuI | AGGCCT | 1 cut(s) | 2058 |
| StyD4I | CCNGG | 9 cut(s) | 689, 1127, 2598, 3106, 3237, 3867, 3964, 4165, 4402 |
| StyI | CCWWGG | 4 cut(s) | 873, 1472, 1902, 3395 |
| TaiI | ACGT | 4 cut(s) | 562, 913, 1071, 1087 |
| TaqII | GACCGA | 1 cut(s) | 2975 |
| TatI | WGTACW | 7 cut(s) | 778, 961, 2012, 2702, 3953, 4240, 4298 |
| TauI | GCSGC | 2 cut(s) | 458, 669 |
| TfiI | GAWTC | 9 cut(s) | 206, 476, 587, 651, 807, 1635, 2836, 3561, 3791 |
| TscAI | CASTG | 8 cut(s) | 1366, 1978, 2092, 2233, 2374, 3451, 3482, 3682 |
| TseFI | GTSAC | 4 cut(s) | 1145, 3530, 3683, 3695 |
| TseI | GCWGC | 7 cut(s) | 623, 1907, 2154, 2295, 2828, 3660, 4221 |
| Tsp45I | GTSAC | 4 cut(s) | 1145, 3530, 3683, 3695 |
| TspGWI | ACGGA | 3 cut(s) | 3145, 3944, 4336 |
| TspRI | CASTG | 8 cut(s) | 1366, 1978, 2092, 2233, 2374, 3451, 3482, 3682 |
| Vha464I | CTTAAG | 4 cut(s) | 161, 463, 1952, 2093 |
| VneI | GTGCAC | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 4 cut(s) | 4, 1759, 3865, 4118 |
| VspI | ATTAAT | 1 cut(s) | 3414 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3918 |
| XbaI | TCTAGA | 1 cut(s) | 1279 |
| XceI | RCATGY | 5 cut(s) | 1293, 1589, 1867, 3379, 4518 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2839, 3605 |
| XhoI | CTCGAG | 1 cut(s) | 1418 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1037, 1329, 1506, 2262, 2403, 2859 |
| XspI | CTAG | 8 cut(s) | 845, 948, 965, 1205, 1253, 1280, 3693, 4304 |
| ZrmI | AGTACT | 1 cut(s) | 963 |
| Zsp2I | ATGCAT | 1 cut(s) | 4557 |