transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 128 |
| AccII | CGCG | 2 cut(s) | 552, 777 |
| AciI | CCGC | 2 cut(s) | 743, 775 |
| AclWI | GGATC | 3 cut(s) | 358, 670, 1074 |
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AcsI | RAATTY | 3 cut(s) | 482, 789, 970 |
| AcuI | CTGAAG | 1 cut(s) | 719 |
| AfaI | GTAC | 2 cut(s) | 549, 707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 205, 300, 301, 629 |
| AgeI | ACCGGT | 1 cut(s) | 280 |
| AgsI | TTSAA | 7 cut(s) | 53, 203, 259, 430, 503, 976, 1021 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 585, 612, 617, 644 |
| AleI | CACNNNNGTG | 1 cut(s) | 104 |
| AluBI | AGCT | 5 cut(s) | 454, 838, 869, 940, 1012 |
| AluI | AGCT | 5 cut(s) | 454, 838, 869, 940, 1012 |
| Alw26I | GTCTC | 1 cut(s) | 572 |
| AlwI | GGATC | 3 cut(s) | 358, 670, 1074 |
| AoxI | GGCC | 3 cut(s) | 63, 130, 997 |
| ApoI | RAATTY | 3 cut(s) | 482, 789, 970 |
| AsiGI | ACCGGT | 1 cut(s) | 280 |
| AspS9I | GGNCC | 1 cut(s) | 64 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 295, 917 |
| BalI | TGGCCA | 1 cut(s) | 132 |
| BanII | GRGCYC | 1 cut(s) | 812 |
| BauI | CACGAG | 1 cut(s) | 639 |
| BbsI | GAAGAC | 1 cut(s) | 806 |
| BccI | CCATC | 2 cut(s) | 650, 747 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 542, 576 |
| BclI | TGATCA | 1 cut(s) | 526 |
| BcoDI | GTCTC | 1 cut(s) | 572 |
| BfaI | CTAG | 2 cut(s) | 42, 359 |
| BfuAI | ACCTGC | 1 cut(s) | 128 |
| BglII | AGATCT | 1 cut(s) | 765 |
| BmgT120I | GGNCC | 1 cut(s) | 64 |
| BmiI | GGNNCC | 1 cut(s) | 830 |
| BmsI | GCATC | 8 cut(s) | 276, 319, 341, 409, 550, 835, 982, 1037 |
| BpiI | GAAGAC | 1 cut(s) | 806 |
| BpuEI | CTTGAG | 3 cut(s) | 388, 962, 1049 |
| BsaJI | CCNNGG | 1 cut(s) | 623 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 205, 300, 301, 629 |
| Bse118I | RCCGGY | 2 cut(s) | 280, 995 |
| Bse1I | ACTGG | 1 cut(s) | 932 |
| BseDI | CCNNGG | 1 cut(s) | 623 |
| BseGI | GGATG | 4 cut(s) | 310, 565, 739, 1052 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 205, 300, 301, 629 |
| BseNI | ACTGG | 1 cut(s) | 932 |
| Bsh1236I | CGCG | 2 cut(s) | 552, 777 |
| BshFI | GGCC | 3 cut(s) | 65, 132, 999 |
| BshTI | ACCGGT | 1 cut(s) | 280 |
| BsiSI | CCGG | 2 cut(s) | 281, 996 |
| BslFI | GGGAC | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 205, 300, 301, 629 |
| BsmAI | GTCTC | 1 cut(s) | 572 |
| BsmBI | CGTCTC | 1 cut(s) | 572 |
| BsmFI | GGGAC | 1 cut(s) | 39 |
| BsmI | GAATGC | 3 cut(s) | 239, 414, 639 |
| BsnI | GGCC | 3 cut(s) | 65, 132, 999 |
| Bsp1286I | GDGCHC | 1 cut(s) | 812 |
| Bsp143I | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| BspACI | CCGC | 2 cut(s) | 743, 775 |
| BspANI | GGCC | 3 cut(s) | 65, 132, 999 |
| BspFNI | CGCG | 2 cut(s) | 552, 777 |
| BspLI | GGNNCC | 1 cut(s) | 830 |
| BspMI | ACCTGC | 1 cut(s) | 128 |
| BspPI | GGATC | 3 cut(s) | 358, 670, 1074 |
| BsrFI | RCCGGY | 2 cut(s) | 280, 995 |
| BsrI | ACTGG | 1 cut(s) | 932 |
| BssAI | RCCGGY | 2 cut(s) | 280, 995 |
| BssECI | CCNNGG | 1 cut(s) | 623 |
| BssMI | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| BssSI | CACGAG | 1 cut(s) | 639 |
| BssT1I | CCWWGG | 1 cut(s) | 623 |
| Bst2BI | CACGAG | 1 cut(s) | 639 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| Bst6I | CTCTTC | 1 cut(s) | 549 |
| BstC8I | GCNNGC | 1 cut(s) | 997 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 203 |
| BstF5I | GGATG | 4 cut(s) | 310, 565, 739, 1052 |
| BstFNI | CGCG | 2 cut(s) | 552, 777 |
| BstKTI | GATC | 6 cut(s) | 76, 353, 529, 665, 768, 1069 |
| BstMAI | GTCTC | 1 cut(s) | 572 |
| BstMBI | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 854, 959 |
| BstNSI | RCATGY | 1 cut(s) | 924 |
| BstUI | CGCG | 2 cut(s) | 552, 777 |
| BstV2I | GAAGAC | 1 cut(s) | 806 |
| BstX2I | RGATCY | 2 cut(s) | 765, 1066 |
| BstYI | RGATCY | 2 cut(s) | 765, 1066 |
| BsuRI | GGCC | 3 cut(s) | 65, 132, 999 |
| BtgZI | GCGATG | 1 cut(s) | 669 |
| BtsCI | GGATG | 4 cut(s) | 310, 565, 739, 1052 |
| BtsIMutI | CAGTG | 2 cut(s) | 360, 441 |
| BveI | ACCTGC | 1 cut(s) | 128 |
| Cac8I | GCNNGC | 1 cut(s) | 997 |
| Cfr10I | RCCGGY | 2 cut(s) | 280, 995 |
| Cfr13I | GGNCC | 1 cut(s) | 64 |
| CseI | GACGC | 1 cut(s) | 724 |
| Csp6I | GTAC | 2 cut(s) | 548, 706 |
| CspAI | ACCGGT | 1 cut(s) | 280 |
| CviAII | CATG | 7 cut(s) | 134, 530, 816, 921, 954, 979, 1063 |
| CviQI | GTAC | 2 cut(s) | 548, 706 |
| DpnI | GATC | 6 cut(s) | 75, 352, 528, 664, 767, 1068 |
| DpnII | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 549 |
| EarI | CTCTTC | 1 cut(s) | 549 |
| Eco130I | CCWWGG | 1 cut(s) | 623 |
| Eco24I | GRGCYC | 1 cut(s) | 812 |
| Eco57I | CTGAAG | 1 cut(s) | 719 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 203 |
| EcoT14I | CCWWGG | 1 cut(s) | 623 |
| EcoT22I | ATGCAT | 3 cut(s) | 334, 850, 1064 |
| EcoT38I | GRGCYC | 1 cut(s) | 812 |
| ErhI | CCWWGG | 1 cut(s) | 623 |
| Esp3I | CGTCTC | 1 cut(s) | 572 |
| FaeI | CATG | 7 cut(s) | 137, 533, 819, 924, 957, 982, 1066 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 441, 473, 607, 639 |
| FaqI | GGGAC | 1 cut(s) | 39 |
| FatI | CATG | 7 cut(s) | 133, 529, 815, 920, 953, 978, 1062 |
| FbaI | TGATCA | 1 cut(s) | 526 |
| FokI | GGATG | 4 cut(s) | 317, 572, 726, 1059 |
| FriOI | GRGCYC | 1 cut(s) | 812 |
| FspBI | CTAG | 2 cut(s) | 42, 359 |
| HaeIII | GGCC | 3 cut(s) | 65, 132, 999 |
| HapII | CCGG | 2 cut(s) | 281, 996 |
| HgaI | GACGC | 1 cut(s) | 724 |
| Hin1II | CATG | 7 cut(s) | 137, 533, 819, 924, 957, 982, 1066 |
| HincII | GTYRAC | 1 cut(s) | 270 |
| HindII | GTYRAC | 1 cut(s) | 270 |
| HpaII | CCGG | 2 cut(s) | 281, 996 |
| HphI | GGTGA | 3 cut(s) | 16, 295, 917 |
| Hpy166II | GTNNAC | 3 cut(s) | 270, 620, 755 |
| Hpy188I | TCNGA | 2 cut(s) | 337, 1040 |
| Hpy188III | TCNNGA | 2 cut(s) | 405, 587 |
| Hpy8I | GTNNAC | 3 cut(s) | 270, 620, 755 |
| HpyAV | CCTTC | 7 cut(s) | 209, 235, 253, 364, 814, 910, 938 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4IV | ACGT | 2 cut(s) | 118, 581 |
| HpyCH4V | TGCA | 8 cut(s) | 137, 237, 332, 422, 533, 675, 848, 1062 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 854, 959 |
| HpySE526I | ACGT | 2 cut(s) | 118, 581 |
| Hsp92II | CATG | 7 cut(s) | 137, 533, 819, 924, 957, 982, 1066 |
| KroI | GCCGGC | 1 cut(s) | 995 |
| KroNI | GCCGGC | 1 cut(s) | 997 |
| Ksp22I | TGATCA | 1 cut(s) | 526 |
| Kzo9I | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| LmnI | GCTCC | 2 cut(s) | 828, 1017 |
| LpnPI | CCDG | 9 cut(s) | 8, 80, 123, 193, 294, 600, 945, 991, 1009 |
| LweI | GCATC | 8 cut(s) | 276, 319, 341, 409, 550, 835, 982, 1037 |
| MaeI | CTAG | 2 cut(s) | 42, 359 |
| MaeII | ACGT | 2 cut(s) | 118, 581 |
| MaeIII | GTNAC | 4 cut(s) | 4, 83, 712, 923 |
| MalI | GATC | 6 cut(s) | 75, 352, 528, 664, 767, 1068 |
| MboI | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| MboII | GAAGA | 3 cut(s) | 566, 712, 811 |
| MfeI | CAATTG | 3 cut(s) | 425, 684, 1016 |
| MflI | RGATCY | 2 cut(s) | 765, 1066 |
| MhlI | GDGCHC | 1 cut(s) | 812 |
| MlsI | TGGCCA | 1 cut(s) | 132 |
| MluNI | TGGCCA | 1 cut(s) | 132 |
| MmeI | TCCRAC | 1 cut(s) | 328 |
| Mox20I | TGGCCA | 1 cut(s) | 132 |
| Mph1103I | ATGCAT | 3 cut(s) | 334, 850, 1064 |
| MroNI | GCCGGC | 1 cut(s) | 995 |
| MscI | TGGCCA | 1 cut(s) | 132 |
| MslI | CAYNNNNRTG | 1 cut(s) | 104 |
| Msp20I | TGGCCA | 1 cut(s) | 132 |
| MspI | CCGG | 2 cut(s) | 281, 996 |
| MunI | CAATTG | 3 cut(s) | 425, 684, 1016 |
| Mva1269I | GAATGC | 3 cut(s) | 239, 414, 639 |
| MvnI | CGCG | 2 cut(s) | 552, 777 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 854, 959 |
| NaeI | GCCGGC | 1 cut(s) | 997 |
| NdeII | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| NgoMIV | GCCGGC | 1 cut(s) | 995 |
| NlaIII | CATG | 7 cut(s) | 137, 533, 819, 924, 957, 982, 1066 |
| NlaIV | GGNNCC | 1 cut(s) | 830 |
| NmuCI | GTSAC | 3 cut(s) | 4, 712, 923 |
| NsiI | ATGCAT | 3 cut(s) | 334, 850, 1064 |
| NspI | RCATGY | 1 cut(s) | 924 |
| OliI | CACNNNNGTG | 1 cut(s) | 104 |
| PctI | GAATGC | 3 cut(s) | 239, 414, 639 |
| PdiI | GCCGGC | 1 cut(s) | 997 |
| PinAI | ACCGGT | 1 cut(s) | 280 |
| PspN4I | GGNNCC | 1 cut(s) | 830 |
| PspPI | GGNCC | 1 cut(s) | 64 |
| PsuI | RGATCY | 2 cut(s) | 765, 1066 |
| RsaI | GTAC | 2 cut(s) | 549, 707 |
| RsaNI | GTAC | 2 cut(s) | 548, 706 |
| RseI | CAYNNNNRTG | 1 cut(s) | 104 |
| Sau3AI | GATC | 6 cut(s) | 73, 350, 526, 662, 765, 1066 |
| Sau96I | GGNCC | 1 cut(s) | 64 |
| SduI | GDGCHC | 1 cut(s) | 812 |
| SfaNI | GCATC | 8 cut(s) | 276, 319, 341, 409, 550, 835, 982, 1037 |
| SgrAI | CRCCGGYG | 1 cut(s) | 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 104 |
| SmlI | CTYRAG | 3 cut(s) | 403, 941, 1028 |
| SmoI | CTYRAG | 3 cut(s) | 403, 941, 1028 |
| SsiI | CCGC | 2 cut(s) | 743, 775 |
| SspMI | CTAG | 2 cut(s) | 42, 359 |
| StyI | CCWWGG | 1 cut(s) | 623 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TaiI | ACGT | 2 cut(s) | 121, 584 |
| TatI | WGTACW | 1 cut(s) | 705 |
| TscAI | CASTG | 2 cut(s) | 360, 448 |
| TseFI | GTSAC | 3 cut(s) | 4, 712, 923 |
| Tsp45I | GTSAC | 3 cut(s) | 4, 712, 923 |
| TspDTI | ATGAA | 6 cut(s) | 111, 246, 321, 606, 995, 1038 |
| TspGWI | ACGGA | 1 cut(s) | 476 |
| TspRI | CASTG | 2 cut(s) | 360, 448 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 203 |
| XapI | RAATTY | 3 cut(s) | 482, 789, 970 |
| XceI | RCATGY | 1 cut(s) | 924 |
| XspI | CTAG | 2 cut(s) | 42, 359 |
| Zsp2I | ATGCAT | 3 cut(s) | 334, 850, 1064 |