transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 816, 828 |
| AccI | GTMKAC | 1 cut(s) | 683 |
| AccIII | TCCGGA | 1 cut(s) | 70 |
| AciI | CCGC | 1 cut(s) | 240 |
| AclWI | GGATC | 1 cut(s) | 131 |
| AcoI | YGGCCR | 1 cut(s) | 241 |
| AcsI | RAATTY | 1 cut(s) | 744 |
| AcvI | CACGTG | 1 cut(s) | 86 |
| AfaI | GTAC | 2 cut(s) | 320, 662 |
| AflII | CTTAAG | 1 cut(s) | 269 |
| AflIII | ACRYGT | 2 cut(s) | 83, 335 |
| AgsI | TTSAA | 4 cut(s) | 459, 540, 644, 796 |
| AhlI | ACTAGT | 1 cut(s) | 704 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 731, 763 |
| AluBI | AGCT | 1 cut(s) | 103 |
| AluI | AGCT | 1 cut(s) | 103 |
| Alw21I | GWGCWC | 1 cut(s) | 91 |
| AlwI | GGATC | 1 cut(s) | 131 |
| Aor13HI | TCCGGA | 1 cut(s) | 70 |
| AoxI | GGCC | 3 cut(s) | 241, 296, 367 |
| ApoI | RAATTY | 1 cut(s) | 744 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 694, 726 |
| AspLEI | GCGC | 1 cut(s) | 792 |
| AspS9I | GGNCC | 2 cut(s) | 368, 443 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 748 |
| AvaII | GGWCC | 1 cut(s) | 443 |
| BbrPI | CACGTG | 1 cut(s) | 86 |
| BbsI | GAAGAC | 1 cut(s) | 875 |
| Bbv12I | GWGCWC | 1 cut(s) | 91 |
| BccI | CCATC | 2 cut(s) | 460, 605 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 311, 345 |
| BclI | TGATCA | 2 cut(s) | 163, 340 |
| BcuI | ACTAGT | 1 cut(s) | 704 |
| BfaI | CTAG | 4 cut(s) | 300, 594, 705, 768 |
| BfrI | CTTAAG | 1 cut(s) | 269 |
| BglII | AGATCT | 1 cut(s) | 411 |
| BisI | GCNGC | 1 cut(s) | 241 |
| BlsI | GCNGC | 1 cut(s) | 242 |
| Bme18I | GGWCC | 1 cut(s) | 443 |
| BmgT120I | GGNCC | 2 cut(s) | 368, 443 |
| BmiI | GGNNCC | 1 cut(s) | 444 |
| BmsI | GCATC | 2 cut(s) | 304, 790 |
| BpiI | GAAGAC | 1 cut(s) | 875 |
| Bpu10I | CCTNAGC | 1 cut(s) | 653 |
| BsaAI | YACGTR | 1 cut(s) | 86 |
| BsaJI | CCNNGG | 1 cut(s) | 26 |
| BsaWI | WCCGGW | 1 cut(s) | 70 |
| Bse1I | ACTGG | 1 cut(s) | 887 |
| BseAI | TCCGGA | 1 cut(s) | 70 |
| BseDI | CCNNGG | 1 cut(s) | 26 |
| BseGI | GGATG | 3 cut(s) | 79, 139, 319 |
| BseMII | CTCAG | 2 cut(s) | 104, 186 |
| BseNI | ACTGG | 1 cut(s) | 887 |
| BshFI | GGCC | 3 cut(s) | 243, 298, 369 |
| BsiHKAI | GWGCWC | 1 cut(s) | 91 |
| BsiSI | CCGG | 2 cut(s) | 71, 951 |
| BsiWI | CGTACG | 1 cut(s) | 318 |
| BslFI | GGGAC | 4 cut(s) | 170, 456, 601, 832 |
| BsmFI | GGGAC | 4 cut(s) | 170, 456, 601, 832 |
| BsnI | GGCC | 3 cut(s) | 243, 298, 369 |
| Bsp1286I | GDGCHC | 1 cut(s) | 91 |
| Bsp13I | TCCGGA | 1 cut(s) | 70 |
| Bsp143I | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| BspACI | CCGC | 1 cut(s) | 240 |
| BspANI | GGCC | 3 cut(s) | 243, 298, 369 |
| BspCNI | CTCAG | 2 cut(s) | 103, 187 |
| BspEI | TCCGGA | 1 cut(s) | 70 |
| BspLI | GGNNCC | 1 cut(s) | 444 |
| BspPI | GGATC | 1 cut(s) | 131 |
| BspTI | CTTAAG | 1 cut(s) | 269 |
| BsrI | ACTGG | 1 cut(s) | 887 |
| BssECI | CCNNGG | 1 cut(s) | 26 |
| BssMI | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| BssT1I | CCWWGG | 1 cut(s) | 26 |
| Bst4CI | ACNGT | 2 cut(s) | 731, 760 |
| BstAFI | CTTAAG | 1 cut(s) | 269 |
| BstBAI | YACGTR | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 1 cut(s) | 788 |
| BstDEI | CTNAG | 4 cut(s) | 90, 195, 364, 653 |
| BstEII | GGTNACC | 1 cut(s) | 55 |
| BstF5I | GGATG | 3 cut(s) | 79, 139, 319 |
| BstHHI | GCGC | 1 cut(s) | 792 |
| BstKTI | GATC | 5 cut(s) | 139, 166, 343, 414, 921 |
| BstMBI | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| BstNSI | RCATGY | 3 cut(s) | 237, 339, 790 |
| BstPI | GGTNACC | 1 cut(s) | 55 |
| BstV2I | GAAGAC | 1 cut(s) | 875 |
| BstX2I | RGATCY | 1 cut(s) | 411 |
| BstYI | RGATCY | 1 cut(s) | 411 |
| BsuRI | GGCC | 3 cut(s) | 243, 298, 369 |
| BtgZI | GCGATG | 1 cut(s) | 624 |
| BtsCI | GGATG | 3 cut(s) | 79, 139, 319 |
| Cac8I | GCNNGC | 1 cut(s) | 788 |
| CfoI | GCGC | 1 cut(s) | 792 |
| Cfr13I | GGNCC | 2 cut(s) | 368, 443 |
| Csp6I | GTAC | 2 cut(s) | 319, 661 |
| CviAII | CATG | 7 cut(s) | 234, 336, 439, 787, 876, 934, 940 |
| CviJI | RGCY | 9 cut(s) | 103, 243, 266, 298, 369, 485, 521, 812, 926 |
| CviKI_1 | RGCY | 9 cut(s) | 103, 243, 266, 298, 369, 485, 521, 812, 926 |
| CviQI | GTAC | 2 cut(s) | 319, 661 |
| DdeI | CTNAG | 4 cut(s) | 90, 195, 364, 653 |
| DpnI | GATC | 5 cut(s) | 138, 165, 342, 413, 920 |
| DpnII | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| DraI | TTTAAA | 1 cut(s) | 202 |
| EaeI | YGGCCR | 1 cut(s) | 241 |
| Eco130I | CCWWGG | 1 cut(s) | 26 |
| Eco47I | GGWCC | 1 cut(s) | 443 |
| Eco72I | CACGTG | 1 cut(s) | 86 |
| Eco91I | GGTNACC | 1 cut(s) | 55 |
| EcoO109I | RGGNCCY | 1 cut(s) | 443 |
| EcoO65I | GGTNACC | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 1 cut(s) | 26 |
| EcoT22I | ATGCAT | 2 cut(s) | 235, 805 |
| ErhI | CCWWGG | 1 cut(s) | 26 |
| FaeI | CATG | 7 cut(s) | 237, 339, 442, 790, 879, 937, 943 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 87, 119, 636, 668 |
| FaqI | GGGAC | 4 cut(s) | 170, 456, 601, 832 |
| FatI | CATG | 7 cut(s) | 233, 335, 438, 786, 875, 933, 939 |
| FbaI | TGATCA | 2 cut(s) | 163, 340 |
| FblI | GTMKAC | 1 cut(s) | 683 |
| Fnu4HI | GCNGC | 1 cut(s) | 241 |
| FokI | GGATG | 3 cut(s) | 86, 146, 326 |
| Fsp4HI | GCNGC | 1 cut(s) | 241 |
| FspBI | CTAG | 4 cut(s) | 300, 594, 705, 768 |
| GlaI | GCGC | 1 cut(s) | 791 |
| GluI | GCNGC | 1 cut(s) | 241 |
| HaeIII | GGCC | 3 cut(s) | 243, 298, 369 |
| HapII | CCGG | 2 cut(s) | 71, 951 |
| HhaI | GCGC | 1 cut(s) | 792 |
| Hin1II | CATG | 7 cut(s) | 237, 339, 442, 790, 879, 937, 943 |
| Hin6I | GCGC | 1 cut(s) | 790 |
| HinP1I | GCGC | 1 cut(s) | 790 |
| HincII | GTYRAC | 1 cut(s) | 350 |
| HindII | GTYRAC | 1 cut(s) | 350 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 6 cut(s) | 67, 191, 536, 619, 763, 832 |
| HpaII | CCGG | 2 cut(s) | 71, 951 |
| HphI | GGTGA | 2 cut(s) | 49, 748 |
| Hpy166II | GTNNAC | 2 cut(s) | 350, 684 |
| Hpy188I | TCNGA | 3 cut(s) | 93, 196, 553 |
| Hpy188III | TCNNGA | 1 cut(s) | 71 |
| Hpy8I | GTNNAC | 2 cut(s) | 350, 684 |
| HpyAV | CCTTC | 2 cut(s) | 171, 769 |
| HpyCH4III | ACNGT | 2 cut(s) | 731, 760 |
| HpyCH4IV | ACGT | 1 cut(s) | 85 |
| HpyCH4V | TGCA | 7 cut(s) | 35, 233, 332, 578, 630, 700, 803 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| HpyF3I | CTNAG | 4 cut(s) | 90, 195, 364, 653 |
| HpySE526I | ACGT | 1 cut(s) | 85 |
| Hsp92II | CATG | 7 cut(s) | 237, 339, 442, 790, 879, 937, 943 |
| HspAI | GCGC | 1 cut(s) | 790 |
| Kpn2I | TCCGGA | 1 cut(s) | 70 |
| Ksp22I | TGATCA | 2 cut(s) | 163, 340 |
| Kzo9I | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| LmnI | GCTCC | 2 cut(s) | 251, 783 |
| LpnPI | CCDG | 5 cut(s) | 84, 174, 201, 408, 900 |
| LweI | GCATC | 2 cut(s) | 304, 790 |
| MaeI | CTAG | 4 cut(s) | 300, 594, 705, 768 |
| MaeII | ACGT | 1 cut(s) | 85 |
| MaeIII | GTNAC | 5 cut(s) | 16, 55, 359, 620, 667 |
| MalI | GATC | 5 cut(s) | 138, 165, 342, 413, 920 |
| MboI | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| MboII | GAAGA | 3 cut(s) | 406, 447, 875 |
| MfeI | CAATTG | 1 cut(s) | 167 |
| MflI | RGATCY | 1 cut(s) | 411 |
| MhlI | GDGCHC | 1 cut(s) | 91 |
| MluCI | AATT | 4 cut(s) | 46, 167, 744, 893 |
| MlyI | GAGTC | 3 cut(s) | 628, 772, 826 |
| MnlI | CCTC | 3 cut(s) | 252, 608, 727 |
| Mph1103I | ATGCAT | 2 cut(s) | 235, 805 |
| MroI | TCCGGA | 1 cut(s) | 70 |
| MseI | TTAA | 5 cut(s) | 11, 201, 270, 309, 561 |
| MslI | CAYNNNNRTG | 2 cut(s) | 228, 938 |
| MspCI | CTTAAG | 1 cut(s) | 269 |
| MspI | CCGG | 2 cut(s) | 71, 951 |
| MunI | CAATTG | 1 cut(s) | 167 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| NdeII | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| NlaIII | CATG | 7 cut(s) | 237, 339, 442, 790, 879, 937, 943 |
| NlaIV | GGNNCC | 1 cut(s) | 444 |
| NmuCI | GTSAC | 3 cut(s) | 55, 620, 667 |
| NsiI | ATGCAT | 2 cut(s) | 235, 805 |
| NspI | RCATGY | 3 cut(s) | 237, 339, 790 |
| PaeI | GCATGC | 1 cut(s) | 790 |
| PciI | ACATGT | 1 cut(s) | 335 |
| PfeI | GAWTC | 3 cut(s) | 67, 191, 536 |
| Pfl23II | CGTACG | 1 cut(s) | 318 |
| PkrI | GCNGC | 1 cut(s) | 242 |
| PleI | GAGTC | 3 cut(s) | 627, 771, 826 |
| PmaCI | CACGTG | 1 cut(s) | 86 |
| PmlI | CACGTG | 1 cut(s) | 86 |
| PpsI | GAGTC | 3 cut(s) | 627, 771, 826 |
| Ppu21I | YACGTR | 1 cut(s) | 86 |
| PpuMI | RGGWCCY | 1 cut(s) | 443 |
| PscI | ACATGT | 1 cut(s) | 335 |
| PsiI | TTATAA | 2 cut(s) | 816, 828 |
| Psp5II | RGGWCCY | 1 cut(s) | 443 |
| PspCI | CACGTG | 1 cut(s) | 86 |
| PspEI | GGTNACC | 1 cut(s) | 55 |
| PspLI | CGTACG | 1 cut(s) | 318 |
| PspN4I | GGNNCC | 1 cut(s) | 444 |
| PspPI | GGNCC | 2 cut(s) | 368, 443 |
| PspPPI | RGGWCCY | 1 cut(s) | 443 |
| PsuI | RGATCY | 1 cut(s) | 411 |
| RsaI | GTAC | 2 cut(s) | 320, 662 |
| RsaNI | GTAC | 2 cut(s) | 319, 661 |
| RseI | CAYNNNNRTG | 2 cut(s) | 228, 938 |
| SaqAI | TTAA | 5 cut(s) | 11, 201, 270, 309, 561 |
| SatI | GCNGC | 1 cut(s) | 241 |
| Sau3AI | GATC | 5 cut(s) | 136, 163, 340, 411, 918 |
| Sau96I | GGNCC | 2 cut(s) | 368, 443 |
| SchI | GAGTC | 3 cut(s) | 628, 772, 826 |
| SduI | GDGCHC | 1 cut(s) | 91 |
| SfaNI | GCATC | 2 cut(s) | 304, 790 |
| SinI | GGWCC | 1 cut(s) | 443 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 228, 938 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| SpeI | ACTAGT | 1 cut(s) | 704 |
| SphI | GCATGC | 1 cut(s) | 790 |
| Sse9I | AATT | 4 cut(s) | 46, 167, 744, 893 |
| SsiI | CCGC | 1 cut(s) | 240 |
| SspI | AATATT | 1 cut(s) | 155 |
| SspMI | CTAG | 4 cut(s) | 300, 594, 705, 768 |
| StyI | CCWWGG | 1 cut(s) | 26 |
| TaaI | ACNGT | 2 cut(s) | 731, 760 |
| TaiI | ACGT | 1 cut(s) | 88 |
| TaqI | TCGA | 2 cut(s) | 417, 856 |
| TasI | AATT | 4 cut(s) | 46, 167, 744, 893 |
| TatI | WGTACW | 1 cut(s) | 660 |
| TauI | GCSGC | 1 cut(s) | 243 |
| TfiI | GAWTC | 3 cut(s) | 67, 191, 536 |
| Tru1I | TTAA | 5 cut(s) | 11, 201, 270, 309, 561 |
| Tru9I | TTAA | 5 cut(s) | 11, 201, 270, 309, 561 |
| TseFI | GTSAC | 3 cut(s) | 55, 620, 667 |
| Tsp45I | GTSAC | 3 cut(s) | 55, 620, 667 |
| TspDTI | ATGAA | 1 cut(s) | 427 |
| Vha464I | CTTAAG | 1 cut(s) | 269 |
| VpaK11BI | GGWCC | 1 cut(s) | 443 |
| XapI | RAATTY | 1 cut(s) | 744 |
| XceI | RCATGY | 3 cut(s) | 237, 339, 790 |
| XmiI | GTMKAC | 1 cut(s) | 683 |
| XspI | CTAG | 4 cut(s) | 300, 594, 705, 768 |
| Zsp2I | ATGCAT | 2 cut(s) | 235, 805 |