RNA splicing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 247 |
| AfaI | GTAC | 3 cut(s) | 198, 234, 407 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 376 |
| AgsI | TTSAA | 6 cut(s) | 67, 80, 97, 170, 320, 337 |
| AluBI | AGCT | 2 cut(s) | 385, 435 |
| AluI | AGCT | 2 cut(s) | 385, 435 |
| Alw21I | GWGCWC | 1 cut(s) | 437 |
| AoxI | GGCC | 2 cut(s) | 247, 393 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 46, 78 |
| AspS9I | GGNCC | 1 cut(s) | 394 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 224, 257 |
| BalI | TGGCCA | 1 cut(s) | 249 |
| BanII | GRGCYC | 1 cut(s) | 437 |
| Bbv12I | GWGCWC | 1 cut(s) | 437 |
| BfmI | CTRYAG | 1 cut(s) | 262 |
| BmgT120I | GGNCC | 1 cut(s) | 394 |
| BmiI | GGNNCC | 2 cut(s) | 396, 421 |
| BmsI | GCATC | 2 cut(s) | 435, 457 |
| BpmI | CTGGAG | 1 cut(s) | 395 |
| BpuEI | CTTGAG | 1 cut(s) | 359 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 376 |
| BseGI | GGATG | 2 cut(s) | 10, 448 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BshFI | GGCC | 2 cut(s) | 249, 395 |
| BsiHKAI | GWGCWC | 1 cut(s) | 437 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BsnI | GGCC | 2 cut(s) | 249, 395 |
| Bsp1286I | GDGCHC | 1 cut(s) | 437 |
| BspANI | GGCC | 2 cut(s) | 249, 395 |
| BspLI | GGNNCC | 2 cut(s) | 396, 421 |
| Bst4CI | ACNGT | 1 cut(s) | 258 |
| Bst6I | CTCTTC | 1 cut(s) | 342 |
| BstF5I | GGATG | 2 cut(s) | 10, 448 |
| BstSFI | CTRYAG | 1 cut(s) | 262 |
| BsuRI | GGCC | 2 cut(s) | 249, 395 |
| BtgZI | GCGATG | 1 cut(s) | 458 |
| BtsCI | GGATG | 2 cut(s) | 10, 448 |
| BtsIMutI | CAGTG | 1 cut(s) | 19 |
| Cfr13I | GGNCC | 1 cut(s) | 394 |
| Csp6I | GTAC | 3 cut(s) | 197, 233, 406 |
| CviAII | CATG | 2 cut(s) | 251, 438 |
| CviJI | RGCY | 5 cut(s) | 249, 385, 395, 422, 435 |
| CviKI_1 | RGCY | 5 cut(s) | 249, 385, 395, 422, 435 |
| CviQI | GTAC | 3 cut(s) | 197, 233, 406 |
| EaeI | YGGCCR | 1 cut(s) | 247 |
| Eam1104I | CTCTTC | 1 cut(s) | 342 |
| EarI | CTCTTC | 1 cut(s) | 342 |
| Ecl136II | GAGCTC | 1 cut(s) | 435 |
| Eco24I | GRGCYC | 1 cut(s) | 437 |
| Eco53kI | GAGCTC | 1 cut(s) | 435 |
| EcoICRI | GAGCTC | 1 cut(s) | 435 |
| EcoT22I | ATGCAT | 2 cut(s) | 450, 462 |
| EcoT38I | GRGCYC | 1 cut(s) | 437 |
| FaeI | CATG | 2 cut(s) | 254, 441 |
| FaiI | YATR | 7 cut(s) | 119, 134, 147, 252, 264, 439, 458 |
| FatI | CATG | 2 cut(s) | 250, 437 |
| FokI | GGATG | 2 cut(s) | 17, 435 |
| FriOI | GRGCYC | 1 cut(s) | 437 |
| GsuI | CTGGAG | 1 cut(s) | 395 |
| HaeIII | GGCC | 2 cut(s) | 249, 395 |
| Hin1II | CATG | 2 cut(s) | 254, 441 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 3 cut(s) | 54, 157, 453 |
| Hpy188III | TCNNGA | 2 cut(s) | 94, 412 |
| HpyAV | CCTTC | 1 cut(s) | 433 |
| HpyCH4III | ACNGT | 1 cut(s) | 258 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 235 |
| HpyCH4V | TGCA | 3 cut(s) | 254, 448, 460 |
| HpySE526I | ACGT | 2 cut(s) | 199, 235 |
| Hsp92II | CATG | 2 cut(s) | 254, 441 |
| LmnI | GCTCC | 1 cut(s) | 419 |
| LpnPI | CCDG | 1 cut(s) | 425 |
| LweI | GCATC | 2 cut(s) | 435, 457 |
| MaeII | ACGT | 2 cut(s) | 199, 235 |
| MaeIII | GTNAC | 2 cut(s) | 110, 200 |
| MboII | GAAGA | 1 cut(s) | 359 |
| MhlI | GDGCHC | 1 cut(s) | 437 |
| MlsI | TGGCCA | 1 cut(s) | 249 |
| MluCI | AATT | 5 cut(s) | 37, 60, 97, 165, 355 |
| MluNI | TGGCCA | 1 cut(s) | 249 |
| MmeI | TCCRAC | 1 cut(s) | 321 |
| MnlI | CCTC | 4 cut(s) | 220, 223, 312, 419 |
| Mox20I | TGGCCA | 1 cut(s) | 249 |
| Mph1103I | ATGCAT | 2 cut(s) | 450, 462 |
| MscI | TGGCCA | 1 cut(s) | 249 |
| MseI | TTAA | 2 cut(s) | 59, 366 |
| Msp20I | TGGCCA | 1 cut(s) | 249 |
| NlaIII | CATG | 2 cut(s) | 254, 441 |
| NlaIV | GGNNCC | 2 cut(s) | 396, 421 |
| NmeAIII | GCCGAG | 1 cut(s) | 371 |
| NmuCI | GTSAC | 2 cut(s) | 110, 200 |
| NsiI | ATGCAT | 2 cut(s) | 450, 462 |
| Psp124BI | GAGCTC | 1 cut(s) | 437 |
| PspN4I | GGNNCC | 2 cut(s) | 396, 421 |
| PspPI | GGNCC | 1 cut(s) | 394 |
| RsaI | GTAC | 3 cut(s) | 198, 234, 407 |
| RsaNI | GTAC | 3 cut(s) | 197, 233, 406 |
| SacI | GAGCTC | 1 cut(s) | 437 |
| SaqAI | TTAA | 2 cut(s) | 59, 366 |
| Sau96I | GGNCC | 1 cut(s) | 394 |
| SduI | GDGCHC | 1 cut(s) | 437 |
| SfaNI | GCATC | 2 cut(s) | 435, 457 |
| SfcI | CTRYAG | 1 cut(s) | 262 |
| SmlI | CTYRAG | 1 cut(s) | 374 |
| SmoI | CTYRAG | 1 cut(s) | 374 |
| Sse9I | AATT | 5 cut(s) | 37, 60, 97, 165, 355 |
| SstI | GAGCTC | 1 cut(s) | 437 |
| TaaI | ACNGT | 1 cut(s) | 258 |
| TaiI | ACGT | 2 cut(s) | 202, 238 |
| TaqI | TCGA | 2 cut(s) | 182, 431 |
| TasI | AATT | 5 cut(s) | 37, 60, 97, 165, 355 |
| Tru1I | TTAA | 2 cut(s) | 59, 366 |
| Tru9I | TTAA | 2 cut(s) | 59, 366 |
| TscAI | CASTG | 1 cut(s) | 19 |
| TseFI | GTSAC | 2 cut(s) | 110, 200 |
| Tsp45I | GTSAC | 2 cut(s) | 110, 200 |
| TspDTI | ATGAA | 2 cut(s) | 18, 360 |
| TspGWI | ACGGA | 1 cut(s) | 416 |
| TspRI | CASTG | 1 cut(s) | 19 |
| Zsp2I | ATGCAT | 2 cut(s) | 450, 462 |