transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 488 |
| Acc16I | TGCGCA | 1 cut(s) | 156 |
| AccB1I | GGYRCC | 2 cut(s) | 233, 388 |
| AciI | CCGC | 1 cut(s) | 554 |
| AclWI | GGATC | 1 cut(s) | 426 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AcuI | CTGAAG | 1 cut(s) | 360 |
| AcyI | GRCGYC | 3 cut(s) | 234, 485, 702 |
| AflII | CTTAAG | 2 cut(s) | 404, 518 |
| AgsI | TTSAA | 5 cut(s) | 79, 89, 119, 427, 646 |
| AluBI | AGCT | 3 cut(s) | 92, 256, 505 |
| AluI | AGCT | 3 cut(s) | 92, 256, 505 |
| Alw21I | GWGCWC | 1 cut(s) | 258 |
| Alw26I | GTCTC | 1 cut(s) | 446 |
| AlwI | GGATC | 1 cut(s) | 426 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 571 |
| AspLEI | GCGC | 2 cut(s) | 157, 236 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| BanI | GGYRCC | 2 cut(s) | 233, 388 |
| BanII | GRGCYC | 1 cut(s) | 258 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 319, 351 |
| BbsI | GAAGAC | 1 cut(s) | 327 |
| Bbv12I | GWGCWC | 1 cut(s) | 258 |
| BccI | CCATC | 3 cut(s) | 53, 224, 652 |
| BceAI | ACGGC | 1 cut(s) | 24 |
| BciVI | GTATCC | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 446 |
| BfaI | CTAG | 3 cut(s) | 12, 284, 624 |
| BfoI | RGCGCY | 1 cut(s) | 237 |
| BfrI | CTTAAG | 2 cut(s) | 404, 518 |
| BfuI | GTATCC | 1 cut(s) | 111 |
| BmiI | GGNNCC | 3 cut(s) | 235, 390, 613 |
| BmsI | GCATC | 2 cut(s) | 175, 504 |
| BpiI | GAAGAC | 1 cut(s) | 327 |
| BpuEI | CTTGAG | 4 cut(s) | 323, 338, 477, 623 |
| BsaAI | YACGTR | 1 cut(s) | 714 |
| BsaHI | GRCGYC | 3 cut(s) | 234, 485, 702 |
| BsaJI | CCNNGG | 1 cut(s) | 189 |
| BsaWI | WCCGGW | 1 cut(s) | 415 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 189 |
| BseGI | GGATG | 1 cut(s) | 190 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 2 cut(s) | 194, 620 |
| BshNI | GGYRCC | 2 cut(s) | 233, 388 |
| BsiHKAI | GWGCWC | 1 cut(s) | 258 |
| BsiSI | CCGG | 1 cut(s) | 416 |
| BslFI | GGGAC | 1 cut(s) | 458 |
| BsmAI | GTCTC | 1 cut(s) | 446 |
| BsmBI | CGTCTC | 1 cut(s) | 446 |
| BsmFI | GGGAC | 1 cut(s) | 458 |
| BsmI | GAATGC | 1 cut(s) | 723 |
| Bsp1286I | GDGCHC | 1 cut(s) | 258 |
| Bsp143I | GATC | 2 cut(s) | 148, 418 |
| Bsp19I | CCATGG | 1 cut(s) | 189 |
| BspACI | CCGC | 1 cut(s) | 554 |
| BspLI | GGNNCC | 3 cut(s) | 235, 390, 613 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BspQI | GCTCTTC | 1 cut(s) | 246 |
| BspT107I | GGYRCC | 2 cut(s) | 233, 388 |
| BspTI | CTTAAG | 2 cut(s) | 404, 518 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BssECI | CCNNGG | 1 cut(s) | 189 |
| BssMI | GATC | 2 cut(s) | 148, 418 |
| BssNI | GRCGYC | 3 cut(s) | 234, 485, 702 |
| BssT1I | CCWWGG | 1 cut(s) | 189 |
| Bst6I | CTCTTC | 1 cut(s) | 246 |
| BstACI | GRCGYC | 3 cut(s) | 234, 485, 702 |
| BstAFI | CTTAAG | 2 cut(s) | 404, 518 |
| BstBAI | YACGTR | 1 cut(s) | 714 |
| BstDSI | CCRYGG | 1 cut(s) | 189 |
| BstF5I | GGATG | 1 cut(s) | 190 |
| BstH2I | RGCGCY | 1 cut(s) | 237 |
| BstHHI | GCGC | 2 cut(s) | 157, 236 |
| BstKTI | GATC | 2 cut(s) | 151, 421 |
| BstMAI | GTCTC | 1 cut(s) | 446 |
| BstMBI | GATC | 2 cut(s) | 148, 418 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 523 |
| BstV2I | GAAGAC | 1 cut(s) | 327 |
| BsuI | GTATCC | 1 cut(s) | 111 |
| BtgI | CCRYGG | 1 cut(s) | 189 |
| BtsCI | GGATG | 1 cut(s) | 190 |
| BtsIMutI | CAGTG | 1 cut(s) | 384 |
| CfoI | GCGC | 2 cut(s) | 157, 236 |
| CseI | GACGC | 1 cut(s) | 691 |
| CviAII | CATG | 3 cut(s) | 123, 166, 190 |
| DinI | GGCGCC | 1 cut(s) | 235 |
| DpnI | GATC | 2 cut(s) | 150, 420 |
| DpnII | GATC | 2 cut(s) | 148, 418 |
| DraI | TTTAAA | 1 cut(s) | 736 |
| Eam1104I | CTCTTC | 1 cut(s) | 246 |
| EarI | CTCTTC | 1 cut(s) | 246 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 1 cut(s) | 189 |
| Eco24I | GRGCYC | 1 cut(s) | 258 |
| Eco32I | GATATC | 1 cut(s) | 559 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 1 cut(s) | 360 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoRV | GATATC | 1 cut(s) | 559 |
| EcoT14I | CCWWGG | 1 cut(s) | 189 |
| EcoT38I | GRGCYC | 1 cut(s) | 258 |
| EgeI | GGCGCC | 1 cut(s) | 235 |
| EheI | GGCGCC | 1 cut(s) | 235 |
| ErhI | CCWWGG | 1 cut(s) | 189 |
| Esp3I | CGTCTC | 1 cut(s) | 446 |
| FaeI | CATG | 3 cut(s) | 126, 169, 193 |
| FaqI | GGGAC | 1 cut(s) | 458 |
| FatI | CATG | 3 cut(s) | 122, 165, 189 |
| FokI | GGATG | 1 cut(s) | 197 |
| FriOI | GRGCYC | 1 cut(s) | 258 |
| FspBI | CTAG | 3 cut(s) | 12, 284, 624 |
| FspI | TGCGCA | 1 cut(s) | 156 |
| GlaI | GCGC | 2 cut(s) | 156, 235 |
| HaeII | RGCGCY | 1 cut(s) | 237 |
| HapII | CCGG | 1 cut(s) | 416 |
| HgaI | GACGC | 1 cut(s) | 691 |
| HhaI | GCGC | 2 cut(s) | 157, 236 |
| Hin1I | GRCGYC | 3 cut(s) | 234, 485, 702 |
| Hin1II | CATG | 3 cut(s) | 126, 169, 193 |
| Hin6I | GCGC | 2 cut(s) | 155, 234 |
| HinP1I | GCGC | 2 cut(s) | 155, 234 |
| HincII | GTYRAC | 1 cut(s) | 489 |
| HindII | GTYRAC | 1 cut(s) | 489 |
| HindIII | AAGCTT | 1 cut(s) | 503 |
| HinfI | GANTC | 1 cut(s) | 382 |
| HpaII | CCGG | 1 cut(s) | 416 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 489 |
| Hpy188III | TCNNGA | 2 cut(s) | 302, 494 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 489 |
| HpyAV | CCTTC | 2 cut(s) | 384, 667 |
| HpyCH4IV | ACGT | 4 cut(s) | 455, 485, 640, 713 |
| HpyCH4V | TGCA | 3 cut(s) | 206, 536, 717 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 523 |
| HpySE526I | ACGT | 4 cut(s) | 455, 485, 640, 713 |
| Hsp92I | GRCGYC | 3 cut(s) | 234, 485, 702 |
| Hsp92II | CATG | 3 cut(s) | 126, 169, 193 |
| HspAI | GCGC | 2 cut(s) | 155, 234 |
| KasI | GGCGCC | 1 cut(s) | 233 |
| Kzo9I | GATC | 2 cut(s) | 148, 418 |
| LguI | GCTCTTC | 1 cut(s) | 246 |
| LmnI | GCTCC | 1 cut(s) | 611 |
| LpnPI | CCDG | 3 cut(s) | 371, 429, 474 |
| LweI | GCATC | 2 cut(s) | 175, 504 |
| MaeI | CTAG | 3 cut(s) | 12, 284, 624 |
| MaeII | ACGT | 4 cut(s) | 455, 485, 640, 713 |
| MaeIII | GTNAC | 1 cut(s) | 456 |
| MalI | GATC | 2 cut(s) | 150, 420 |
| MboI | GATC | 2 cut(s) | 148, 418 |
| MboII | GAAGA | 3 cut(s) | 263, 327, 682 |
| MfeI | CAATTG | 1 cut(s) | 537 |
| MhlI | GDGCHC | 1 cut(s) | 258 |
| MluCI | AATT | 5 cut(s) | 21, 161, 410, 537, 731 |
| Mly113I | GGCGCC | 1 cut(s) | 234 |
| MmeI | TCCRAC | 1 cut(s) | 524 |
| MroXI | GAANNNNTTC | 1 cut(s) | 571 |
| MseI | TTAA | 4 cut(s) | 44, 405, 519, 735 |
| MspCI | CTTAAG | 2 cut(s) | 404, 518 |
| MspI | CCGG | 1 cut(s) | 416 |
| MunI | CAATTG | 1 cut(s) | 537 |
| Mva1269I | GAATGC | 1 cut(s) | 723 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 523 |
| NarI | GGCGCC | 1 cut(s) | 234 |
| NcoI | CCATGG | 1 cut(s) | 189 |
| NdeII | GATC | 2 cut(s) | 148, 418 |
| NlaIII | CATG | 3 cut(s) | 126, 169, 193 |
| NlaIV | GGNNCC | 3 cut(s) | 235, 390, 613 |
| NsbI | TGCGCA | 1 cut(s) | 156 |
| PciSI | GCTCTTC | 1 cut(s) | 246 |
| PctI | GAATGC | 1 cut(s) | 723 |
| PdmI | GAANNNNTTC | 1 cut(s) | 571 |
| PfeI | GAWTC | 1 cut(s) | 382 |
| PluTI | GGCGCC | 1 cut(s) | 237 |
| Ppu21I | YACGTR | 1 cut(s) | 714 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 3 cut(s) | 235, 390, 613 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SapI | GCTCTTC | 1 cut(s) | 246 |
| SaqAI | TTAA | 4 cut(s) | 44, 405, 519, 735 |
| Sau3AI | GATC | 2 cut(s) | 148, 418 |
| SduI | GDGCHC | 1 cut(s) | 258 |
| SfaNI | GCATC | 2 cut(s) | 175, 504 |
| SfoI | GGCGCC | 1 cut(s) | 235 |
| SmlI | CTYRAG | 6 cut(s) | 302, 317, 404, 492, 518, 602 |
| SmoI | CTYRAG | 6 cut(s) | 302, 317, 404, 492, 518, 602 |
| Sse9I | AATT | 5 cut(s) | 21, 161, 410, 537, 731 |
| SsiI | CCGC | 1 cut(s) | 554 |
| SspDI | GGCGCC | 1 cut(s) | 233 |
| SspMI | CTAG | 3 cut(s) | 12, 284, 624 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StyI | CCWWGG | 1 cut(s) | 189 |
| TaiI | ACGT | 4 cut(s) | 458, 488, 643, 716 |
| TaqI | TCGA | 1 cut(s) | 197 |
| TasI | AATT | 5 cut(s) | 21, 161, 410, 537, 731 |
| TfiI | GAWTC | 1 cut(s) | 382 |
| Tru1I | TTAA | 4 cut(s) | 44, 405, 519, 735 |
| Tru9I | TTAA | 4 cut(s) | 44, 405, 519, 735 |
| TscAI | CASTG | 1 cut(s) | 384 |
| TspDTI | ATGAA | 2 cut(s) | 154, 462 |
| TspGWI | ACGGA | 1 cut(s) | 275 |
| TspRI | CASTG | 1 cut(s) | 384 |
| Vha464I | CTTAAG | 2 cut(s) | 404, 518 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XmnI | GAANNNNTTC | 1 cut(s) | 571 |
| XspI | CTAG | 3 cut(s) | 12, 284, 624 |
| ZraI | GACGTC | 1 cut(s) | 486 |