transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 321 |
| AatII | GACGTC | 1 cut(s) | 244 |
| AccI | GTMKAC | 1 cut(s) | 238 |
| AccII | CGCG | 1 cut(s) | 152 |
| AciI | CCGC | 2 cut(s) | 150, 152 |
| AclWI | GGATC | 1 cut(s) | 320 |
| AcsI | RAATTY | 1 cut(s) | 313 |
| AcyI | GRCGYC | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 94 |
| AgsI | TTSAA | 4 cut(s) | 29, 230, 313, 425 |
| AjiI | CACGTC | 1 cut(s) | 134 |
| AluBI | AGCT | 4 cut(s) | 53, 233, 302, 400 |
| AluI | AGCT | 4 cut(s) | 53, 233, 302, 400 |
| Alw21I | GWGCWC | 1 cut(s) | 72 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AlwI | GGATC | 1 cut(s) | 320 |
| ApoI | RAATTY | 1 cut(s) | 313 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 399 |
| AsuHPI | GGTGA | 2 cut(s) | 172, 212 |
| Bbv12I | GWGCWC | 1 cut(s) | 72 |
| BccI | CCATC | 2 cut(s) | 170, 248 |
| BciVI | GTATCC | 1 cut(s) | 148 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfaI | CTAG | 2 cut(s) | 59, 234 |
| BfuI | GTATCC | 1 cut(s) | 148 |
| BmgBI | CACGTC | 1 cut(s) | 134 |
| BmsI | GCATC | 3 cut(s) | 358, 400, 422 |
| BpuEI | CTTGAG | 1 cut(s) | 353 |
| BsaHI | GRCGYC | 1 cut(s) | 241 |
| BsaJI | CCNNGG | 1 cut(s) | 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 1 cut(s) | 150 |
| BseGI | GGATG | 2 cut(s) | 181, 256 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseRI | GAGGAG | 1 cut(s) | 227 |
| BsgI | GTGCAG | 1 cut(s) | 191 |
| Bsh1236I | CGCG | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 1 cut(s) | 72 |
| BslFI | GGGAC | 1 cut(s) | 144 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsmFI | GGGAC | 1 cut(s) | 144 |
| BsmI | GAATGC | 1 cut(s) | 137 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| Bsp143I | GATC | 1 cut(s) | 325 |
| BspACI | CCGC | 2 cut(s) | 150, 152 |
| BspFNI | CGCG | 1 cut(s) | 152 |
| BspHI | TCATGA | 2 cut(s) | 82, 295 |
| BspPI | GGATC | 1 cut(s) | 320 |
| BssECI | CCNNGG | 1 cut(s) | 150 |
| BssMI | GATC | 1 cut(s) | 325 |
| BssNI | GRCGYC | 1 cut(s) | 241 |
| Bst4CI | ACNGT | 1 cut(s) | 160 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstACI | GRCGYC | 1 cut(s) | 241 |
| BstDSI | CCRYGG | 1 cut(s) | 150 |
| BstF5I | GGATG | 2 cut(s) | 181, 256 |
| BstFNI | CGCG | 1 cut(s) | 152 |
| BstKTI | GATC | 1 cut(s) | 328 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 1 cut(s) | 325 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 143 |
| BstNSI | RCATGY | 1 cut(s) | 47 |
| BstUI | CGCG | 1 cut(s) | 152 |
| BstX2I | RGATCY | 1 cut(s) | 325 |
| BstYI | RGATCY | 1 cut(s) | 325 |
| BsuI | GTATCC | 1 cut(s) | 148 |
| BtgI | CCRYGG | 1 cut(s) | 150 |
| BtrI | CACGTC | 1 cut(s) | 134 |
| BtsCI | GGATG | 2 cut(s) | 181, 256 |
| CciI | TCATGA | 2 cut(s) | 82, 295 |
| Cfr42I | CCGCGG | 1 cut(s) | 153 |
| CviAII | CATG | 7 cut(s) | 44, 75, 83, 89, 142, 296, 429 |
| CviJI | RGCY | 5 cut(s) | 53, 146, 233, 302, 400 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 146, 233, 302, 400 |
| DpnI | GATC | 1 cut(s) | 327 |
| DpnII | GATC | 1 cut(s) | 325 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| EcoRI | GAATTC | 1 cut(s) | 313 |
| EcoT22I | ATGCAT | 2 cut(s) | 49, 415 |
| FaeI | CATG | 7 cut(s) | 47, 78, 86, 92, 145, 299, 432 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 315, 347 |
| FaqI | GGGAC | 1 cut(s) | 144 |
| FatI | CATG | 7 cut(s) | 43, 74, 82, 88, 141, 295, 428 |
| FblI | GTMKAC | 1 cut(s) | 238 |
| FokI | GGATG | 2 cut(s) | 188, 263 |
| FspBI | CTAG | 2 cut(s) | 59, 234 |
| Hin1I | GRCGYC | 1 cut(s) | 241 |
| Hin1II | CATG | 7 cut(s) | 47, 78, 86, 92, 145, 299, 432 |
| HincII | GTYRAC | 1 cut(s) | 239 |
| HindII | GTYRAC | 1 cut(s) | 239 |
| HindIII | AAGCTT | 2 cut(s) | 300, 398 |
| HinfI | GANTC | 1 cut(s) | 275 |
| HphI | GGTGA | 2 cut(s) | 172, 212 |
| Hpy166II | GTNNAC | 2 cut(s) | 41, 239 |
| Hpy188I | TCNGA | 3 cut(s) | 109, 211, 250 |
| Hpy188III | TCNNGA | 5 cut(s) | 26, 83, 296, 332, 422 |
| Hpy8I | GTNNAC | 2 cut(s) | 41, 239 |
| Hpy99I | CGWCG | 1 cut(s) | 243 |
| HpyAV | CCTTC | 3 cut(s) | 23, 88, 255 |
| HpyCH4III | ACNGT | 1 cut(s) | 160 |
| HpyCH4IV | ACGT | 2 cut(s) | 133, 241 |
| HpyCH4V | TGCA | 4 cut(s) | 47, 137, 172, 413 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 143 |
| HpySE526I | ACGT | 2 cut(s) | 133, 241 |
| Hsp92I | GRCGYC | 1 cut(s) | 241 |
| Hsp92II | CATG | 7 cut(s) | 47, 78, 86, 92, 145, 299, 432 |
| KspI | CCGCGG | 1 cut(s) | 153 |
| Kzo9I | GATC | 1 cut(s) | 325 |
| LpnPI | CCDG | 1 cut(s) | 158 |
| LweI | GCATC | 3 cut(s) | 358, 400, 422 |
| MaeI | CTAG | 2 cut(s) | 59, 234 |
| MaeII | ACGT | 2 cut(s) | 133, 241 |
| MalI | GATC | 1 cut(s) | 327 |
| MboI | GATC | 1 cut(s) | 325 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MflI | RGATCY | 1 cut(s) | 325 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MluCI | AATT | 1 cut(s) | 313 |
| MmeI | TCCRAC | 1 cut(s) | 372 |
| MnlI | CCTC | 4 cut(s) | 29, 205, 328, 339 |
| Mph1103I | ATGCAT | 2 cut(s) | 49, 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 399 |
| MseI | TTAA | 1 cut(s) | 405 |
| MslI | CAYNNNNRTG | 1 cut(s) | 87 |
| MspA1I | CMGCKG | 1 cut(s) | 152 |
| Mva1269I | GAATGC | 1 cut(s) | 137 |
| MvnI | CGCG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 143 |
| NdeII | GATC | 1 cut(s) | 325 |
| NlaIII | CATG | 7 cut(s) | 47, 78, 86, 92, 145, 299, 432 |
| NsiI | ATGCAT | 2 cut(s) | 49, 415 |
| NspI | RCATGY | 1 cut(s) | 47 |
| PagI | TCATGA | 2 cut(s) | 82, 295 |
| PctI | GAATGC | 1 cut(s) | 137 |
| PdmI | GAANNNNTTC | 1 cut(s) | 399 |
| PfeI | GAWTC | 1 cut(s) | 275 |
| PflFI | GACNNNGTC | 1 cut(s) | 118 |
| PsiI | TTATAA | 1 cut(s) | 321 |
| PsuI | RGATCY | 1 cut(s) | 325 |
| PsyI | GACNNNGTC | 1 cut(s) | 118 |
| RseI | CAYNNNNRTG | 1 cut(s) | 87 |
| SacII | CCGCGG | 1 cut(s) | 153 |
| SalI | GTCGAC | 1 cut(s) | 237 |
| SaqAI | TTAA | 1 cut(s) | 405 |
| Sau3AI | GATC | 1 cut(s) | 325 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SfaNI | GCATC | 3 cut(s) | 358, 400, 422 |
| Sfr303I | CCGCGG | 1 cut(s) | 153 |
| SgrBI | CCGCGG | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 87 |
| SmlI | CTYRAG | 1 cut(s) | 332 |
| SmoI | CTYRAG | 1 cut(s) | 332 |
| Sse9I | AATT | 1 cut(s) | 313 |
| SsiI | CCGC | 2 cut(s) | 150, 152 |
| SspMI | CTAG | 2 cut(s) | 59, 234 |
| TaaI | ACNGT | 1 cut(s) | 160 |
| TaiI | ACGT | 2 cut(s) | 136, 244 |
| TaqI | TCGA | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 313 |
| TfiI | GAWTC | 1 cut(s) | 275 |
| Tru1I | TTAA | 1 cut(s) | 405 |
| Tru9I | TTAA | 1 cut(s) | 405 |
| TspDTI | ATGAA | 3 cut(s) | 130, 206, 312 |
| Tth111I | GACNNNGTC | 1 cut(s) | 118 |
| XapI | RAATTY | 1 cut(s) | 313 |
| XceI | RCATGY | 1 cut(s) | 47 |
| XmiI | GTMKAC | 1 cut(s) | 238 |
| XmnI | GAANNNNTTC | 1 cut(s) | 399 |
| XspI | CTAG | 2 cut(s) | 59, 234 |
| ZraI | GACGTC | 1 cut(s) | 242 |
| Zsp2I | ATGCAT | 2 cut(s) | 49, 415 |