transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 134 |
| AccIII | TCCGGA | 1 cut(s) | 306 |
| AciI | CCGC | 2 cut(s) | 562, 759 |
| AcsI | RAATTY | 2 cut(s) | 377, 648 |
| AdeI | CACNNNGTG | 1 cut(s) | 130 |
| AfaI | GTAC | 1 cut(s) | 744 |
| AflIII | ACRYGT | 1 cut(s) | 294 |
| AgeI | ACCGGT | 1 cut(s) | 665 |
| AgsI | TTSAA | 6 cut(s) | 94, 280, 422, 427, 653, 679 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 542 |
| AhlI | ACTAGT | 1 cut(s) | 155 |
| AjnI | CCWGG | 1 cut(s) | 577 |
| AluBI | AGCT | 3 cut(s) | 34, 98, 586 |
| AluI | AGCT | 3 cut(s) | 34, 98, 586 |
| Aor13HI | TCCGGA | 1 cut(s) | 306 |
| ApeKI | GCWGC | 1 cut(s) | 398 |
| ApoI | RAATTY | 2 cut(s) | 377, 648 |
| AsiGI | ACCGGT | 1 cut(s) | 665 |
| AsuHPI | GGTGA | 2 cut(s) | 137, 291 |
| BbsI | GAAGAC | 1 cut(s) | 212 |
| BbvI | GCAGC | 1 cut(s) | 385 |
| BccI | CCATC | 1 cut(s) | 56 |
| BciT130I | CCWGG | 1 cut(s) | 579 |
| BcuI | ACTAGT | 1 cut(s) | 155 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BfmI | CTRYAG | 2 cut(s) | 288, 339 |
| BisI | GCNGC | 1 cut(s) | 399 |
| BlsI | GCNGC | 1 cut(s) | 400 |
| Bme1390I | CCNGG | 1 cut(s) | 579 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 542 |
| BmrFI | CCNGG | 1 cut(s) | 579 |
| BmsI | GCATC | 2 cut(s) | 361, 385 |
| BpiI | GAAGAC | 1 cut(s) | 212 |
| BpuEI | CTTGAG | 1 cut(s) | 455 |
| BsaJI | CCNNGG | 1 cut(s) | 577 |
| BsaWI | WCCGGW | 2 cut(s) | 306, 665 |
| Bse118I | RCCGGY | 2 cut(s) | 401, 665 |
| Bse3DI | GCAATG | 1 cut(s) | 454 |
| BseAI | TCCGGA | 1 cut(s) | 306 |
| BseBI | CCWGG | 1 cut(s) | 579 |
| BseDI | CCNNGG | 1 cut(s) | 577 |
| BseGI | GGATG | 3 cut(s) | 253, 400, 745 |
| BseMI | GCAATG | 1 cut(s) | 454 |
| BseXI | GCAGC | 1 cut(s) | 385 |
| BsgI | GTGCAG | 1 cut(s) | 660 |
| BshTI | ACCGGT | 1 cut(s) | 665 |
| BsiSI | CCGG | 3 cut(s) | 307, 402, 666 |
| BsmI | GAATGC | 1 cut(s) | 494 |
| Bsp13I | TCCGGA | 1 cut(s) | 306 |
| BspACI | CCGC | 2 cut(s) | 562, 759 |
| BspEI | TCCGGA | 1 cut(s) | 306 |
| BspQI | GCTCTTC | 2 cut(s) | 41, 105 |
| BsrDI | GCAATG | 1 cut(s) | 454 |
| BsrFI | RCCGGY | 2 cut(s) | 401, 665 |
| BssAI | RCCGGY | 2 cut(s) | 401, 665 |
| BssECI | CCNNGG | 1 cut(s) | 577 |
| Bst2UI | CCWGG | 1 cut(s) | 579 |
| Bst4CI | ACNGT | 2 cut(s) | 182, 211 |
| Bst6I | CTCTTC | 2 cut(s) | 41, 105 |
| BstC8I | GCNNGC | 2 cut(s) | 165, 403 |
| BstDEI | CTNAG | 2 cut(s) | 468, 489 |
| BstF5I | GGATG | 3 cut(s) | 253, 400, 745 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 260, 365 |
| BstNI | CCWGG | 1 cut(s) | 579 |
| BstNSI | RCATGY | 1 cut(s) | 298 |
| BstSCI | CCNGG | 1 cut(s) | 577 |
| BstSFI | CTRYAG | 2 cut(s) | 288, 339 |
| BstV1I | GCAGC | 1 cut(s) | 385 |
| BstV2I | GAAGAC | 1 cut(s) | 212 |
| BtgZI | GCGATG | 1 cut(s) | 75 |
| BtsCI | GGATG | 3 cut(s) | 253, 400, 745 |
| BtsI | GCAGTG | 1 cut(s) | 648 |
| BtsIMutI | CAGTG | 1 cut(s) | 648 |
| Cac8I | GCNNGC | 2 cut(s) | 165, 403 |
| Cfr10I | RCCGGY | 2 cut(s) | 401, 665 |
| CseI | GACGC | 1 cut(s) | 260 |
| Csp6I | GTAC | 1 cut(s) | 743 |
| CspAI | ACCGGT | 1 cut(s) | 665 |
| CviAII | CATG | 7 cut(s) | 295, 327, 360, 385, 500, 635, 752 |
| CviJI | RGCY | 8 cut(s) | 34, 98, 263, 325, 368, 405, 455, 586 |
| CviKI_1 | RGCY | 8 cut(s) | 34, 98, 263, 325, 368, 405, 455, 586 |
| CviQI | GTAC | 1 cut(s) | 743 |
| DdeI | CTNAG | 2 cut(s) | 468, 489 |
| DraIII | CACNNNGTG | 1 cut(s) | 130 |
| DriI | GACNNNNNGTC | 1 cut(s) | 542 |
| Eam1104I | CTCTTC | 2 cut(s) | 41, 105 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 542 |
| EarI | CTCTTC | 2 cut(s) | 41, 105 |
| EcoRII | CCWGG | 1 cut(s) | 577 |
| FaeI | CATG | 7 cut(s) | 298, 330, 363, 388, 503, 638, 755 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 23, 55, 87, 119, 182, 214, 534, 566 |
| FatI | CATG | 7 cut(s) | 294, 326, 359, 384, 499, 634, 751 |
| FauI | CCCGC | 2 cut(s) | 569, 766 |
| FblI | GTMKAC | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 1 cut(s) | 399 |
| FokI | GGATG | 3 cut(s) | 260, 407, 752 |
| Fsp4HI | GCNGC | 1 cut(s) | 399 |
| FspBI | CTAG | 1 cut(s) | 156 |
| GluI | GCNGC | 1 cut(s) | 399 |
| HapII | CCGG | 3 cut(s) | 307, 402, 666 |
| HgaI | GACGC | 1 cut(s) | 260 |
| Hin1II | CATG | 7 cut(s) | 298, 330, 363, 388, 503, 638, 755 |
| HindIII | AAGCTT | 1 cut(s) | 584 |
| HinfI | GANTC | 3 cut(s) | 283, 696, 713 |
| HpaII | CCGG | 3 cut(s) | 307, 402, 666 |
| HphI | GGTGA | 2 cut(s) | 137, 291 |
| Hpy166II | GTNNAC | 1 cut(s) | 135 |
| Hpy188I | TCNGA | 4 cut(s) | 21, 44, 108, 225 |
| Hpy188III | TCNNGA | 2 cut(s) | 280, 307 |
| Hpy8I | GTNNAC | 1 cut(s) | 135 |
| HpyAV | CCTTC | 3 cut(s) | 220, 286, 557 |
| HpyCH4III | ACNGT | 2 cut(s) | 182, 211 |
| HpyCH4IV | ACGT | 1 cut(s) | 595 |
| HpyCH4V | TGCA | 4 cut(s) | 81, 215, 447, 641 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 260, 365 |
| HpyF3I | CTNAG | 2 cut(s) | 468, 489 |
| HpySE526I | ACGT | 1 cut(s) | 595 |
| Hsp92II | CATG | 7 cut(s) | 298, 330, 363, 388, 503, 638, 755 |
| Kpn2I | TCCGGA | 1 cut(s) | 306 |
| KroI | GCCGGC | 1 cut(s) | 401 |
| KroNI | GCCGGC | 1 cut(s) | 403 |
| LguI | GCTCTTC | 2 cut(s) | 41, 105 |
| LmnI | GCTCC | 2 cut(s) | 349, 724 |
| LpnPI | CCDG | 6 cut(s) | 320, 351, 415, 564, 591, 679 |
| Lsp1109I | GCAGC | 1 cut(s) | 385 |
| LweI | GCATC | 2 cut(s) | 361, 385 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 595 |
| MaeIII | GTNAC | 5 cut(s) | 69, 297, 329, 616, 656 |
| MboII | GAAGA | 6 cut(s) | 28, 31, 92, 95, 217, 385 |
| MfeI | CAATTG | 2 cut(s) | 82, 422 |
| MluCI | AATT | 5 cut(s) | 82, 377, 422, 569, 648 |
| MlyI | GAGTC | 3 cut(s) | 277, 690, 722 |
| MmeI | TCCRAC | 3 cut(s) | 327, 514, 578 |
| MnlI | CCTC | 8 cut(s) | 59, 159, 430, 445, 510, 575, 730, 758 |
| MroI | TCCGGA | 1 cut(s) | 306 |
| MroNI | GCCGGC | 1 cut(s) | 401 |
| MseI | TTAA | 3 cut(s) | 29, 381, 684 |
| MslI | CAYNNNNRTG | 1 cut(s) | 636 |
| MspI | CCGG | 3 cut(s) | 307, 402, 666 |
| MspR9I | CCNGG | 1 cut(s) | 579 |
| MunI | CAATTG | 2 cut(s) | 82, 422 |
| Mva1269I | GAATGC | 1 cut(s) | 494 |
| MvaI | CCWGG | 1 cut(s) | 579 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 260, 365 |
| NaeI | GCCGGC | 1 cut(s) | 403 |
| NgoMIV | GCCGGC | 1 cut(s) | 401 |
| NlaIII | CATG | 7 cut(s) | 298, 330, 363, 388, 503, 638, 755 |
| NmuCI | GTSAC | 4 cut(s) | 69, 297, 329, 656 |
| NspI | RCATGY | 1 cut(s) | 298 |
| PciI | ACATGT | 1 cut(s) | 294 |
| PciSI | GCTCTTC | 2 cut(s) | 41, 105 |
| PctI | GAATGC | 1 cut(s) | 494 |
| PdiI | GCCGGC | 1 cut(s) | 403 |
| PinAI | ACCGGT | 1 cut(s) | 665 |
| PkrI | GCNGC | 1 cut(s) | 400 |
| PleI | GAGTC | 3 cut(s) | 277, 690, 721 |
| PpsI | GAGTC | 3 cut(s) | 277, 690, 721 |
| PscI | ACATGT | 1 cut(s) | 294 |
| Psp6I | CCWGG | 1 cut(s) | 577 |
| PspGI | CCWGG | 1 cut(s) | 577 |
| RsaI | GTAC | 1 cut(s) | 744 |
| RsaNI | GTAC | 1 cut(s) | 743 |
| RseI | CAYNNNNRTG | 1 cut(s) | 636 |
| SapI | GCTCTTC | 2 cut(s) | 41, 105 |
| SaqAI | TTAA | 3 cut(s) | 29, 381, 684 |
| SatI | GCNGC | 1 cut(s) | 399 |
| SchI | GAGTC | 3 cut(s) | 277, 690, 722 |
| ScrFI | CCNGG | 1 cut(s) | 579 |
| SetI | ASST | 6 cut(s) | 36, 100, 304, 588, 598, 706 |
| SfaNI | GCATC | 2 cut(s) | 361, 385 |
| SfcI | CTRYAG | 2 cut(s) | 288, 339 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 636 |
| SmlI | CTYRAG | 2 cut(s) | 434, 767 |
| SmoI | CTYRAG | 2 cut(s) | 434, 767 |
| SpeI | ACTAGT | 1 cut(s) | 155 |
| Sse9I | AATT | 5 cut(s) | 82, 377, 422, 569, 648 |
| SsiI | CCGC | 2 cut(s) | 562, 759 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 577 |
| TaaI | ACNGT | 2 cut(s) | 182, 211 |
| TaiI | ACGT | 1 cut(s) | 598 |
| TaqI | TCGA | 2 cut(s) | 355, 694 |
| TasI | AATT | 5 cut(s) | 82, 377, 422, 569, 648 |
| Tru1I | TTAA | 3 cut(s) | 29, 381, 684 |
| Tru9I | TTAA | 3 cut(s) | 29, 381, 684 |
| TscAI | CASTG | 1 cut(s) | 648 |
| TseFI | GTSAC | 4 cut(s) | 69, 297, 329, 656 |
| TseI | GCWGC | 1 cut(s) | 398 |
| Tsp45I | GTSAC | 4 cut(s) | 69, 297, 329, 656 |
| TspDTI | ATGAA | 4 cut(s) | 444, 578, 620, 768 |
| TspRI | CASTG | 1 cut(s) | 648 |
| XapI | RAATTY | 2 cut(s) | 377, 648 |
| XceI | RCATGY | 1 cut(s) | 298 |
| XmiI | GTMKAC | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 156 |