protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 581 - 736 | 3.7e-28 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 800 - 898 | 5.9e-34 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 825 - 928 | 1.3e-37 | RNase H-like domain found in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2388 |
| Acc16I | TGCGCA | 2 cut(s) | 1080, 1905 |
| Acc36I | ACCTGC | 1 cut(s) | 820 |
| Acc65I | GGTACC | 1 cut(s) | 110 |
| AccB1I | GGYRCC | 4 cut(s) | 110, 202, 1312, 2525 |
| AccI | GTMKAC | 1 cut(s) | 954 |
| AccII | CGCG | 1 cut(s) | 2564 |
| AciI | CCGC | 3 cut(s) | 1021, 1458, 1844 |
| AclWI | GGATC | 5 cut(s) | 257, 617, 1350, 1806, 3029 |
| AcyI | GRCGYC | 2 cut(s) | 2385, 2526 |
| AfaI | GTAC | 6 cut(s) | 112, 529, 1886, 1996, 2256, 2920 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1642, 1791, 1962, 2475 |
| AflII | CTTAAG | 1 cut(s) | 1328 |
| AflIII | ACRYGT | 3 cut(s) | 1110, 1190, 1505 |
| AgeI | ACCGGT | 1 cut(s) | 1663 |
| AjiI | CACGTC | 2 cut(s) | 1111, 1191 |
| AjnI | CCWGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 794, 826 |
| AleI | CACNNNNGTG | 2 cut(s) | 1508, 2279 |
| Alw21I | GWGCWC | 3 cut(s) | 1182, 2455, 2496 |
| Alw26I | GTCTC | 4 cut(s) | 586, 1181, 1370, 2873 |
| AlwI | GGATC | 5 cut(s) | 257, 617, 1350, 1806, 3029 |
| AoxI | GGCC | 4 cut(s) | 22, 1218, 1747, 1846 |
| ApeKI | GCWGC | 6 cut(s) | 10, 630, 2371, 2417, 2464, 2708 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 936, 968, 1643, 1675, 2375, 2407, 2963, 2995 |
| AseI | ATTAAT | 3 cut(s) | 357, 462, 948 |
| AsiGI | ACCGGT | 1 cut(s) | 1663 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 819 |
| Asp718I | GGTACC | 1 cut(s) | 110 |
| AspA2I | CCTAGG | 1 cut(s) | 688 |
| AspLEI | GCGC | 3 cut(s) | 1081, 1906, 2528 |
| AspS9I | GGNCC | 2 cut(s) | 1846, 2478 |
| AsuNHI | GCTAGC | 1 cut(s) | 775 |
| AvaII | GGWCC | 1 cut(s) | 2478 |
| AvrII | CCTAGG | 1 cut(s) | 688 |
| BaeGI | GKGCMC | 1 cut(s) | 207 |
| BanI | GGYRCC | 4 cut(s) | 110, 202, 1312, 2525 |
| BanII | GRGCYC | 2 cut(s) | 1182, 2496 |
| BbsI | GAAGAC | 5 cut(s) | 544, 922, 1570, 2205, 2441 |
| Bbv12I | GWGCWC | 3 cut(s) | 1182, 2455, 2496 |
| BbvI | GCAGC | 6 cut(s) | 22, 642, 2358, 2404, 2476, 2720 |
| BceAI | ACGGC | 4 cut(s) | 948, 1425, 2504, 2513 |
| BciT130I | CCWGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| BciVI | GTATCC | 1 cut(s) | 1035 |
| BclI | TGATCA | 2 cut(s) | 1822, 2701 |
| BcoDI | GTCTC | 4 cut(s) | 586, 1181, 1370, 2873 |
| BfaI | CTAG | 7 cut(s) | 408, 689, 740, 776, 1616, 2217, 2448 |
| BfmI | CTRYAG | 1 cut(s) | 1957 |
| BfoI | RGCGCY | 1 cut(s) | 2529 |
| BfrI | CTTAAG | 1 cut(s) | 1328 |
| BfuAI | ACCTGC | 1 cut(s) | 820 |
| BfuI | GTATCC | 1 cut(s) | 1035 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1944 |
| BglII | AGATCT | 1 cut(s) | 785 |
| BisI | GCNGC | 6 cut(s) | 11, 631, 2372, 2418, 2465, 2709 |
| BlnI | CCTAGG | 1 cut(s) | 688 |
| BlsI | GCNGC | 6 cut(s) | 12, 632, 2373, 2419, 2466, 2710 |
| BmcAI | AGTACT | 1 cut(s) | 2920 |
| Bme1390I | CCNGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| Bme18I | GGWCC | 1 cut(s) | 2478 |
| BmgBI | CACGTC | 2 cut(s) | 1111, 1191 |
| BmgT120I | GGNCC | 2 cut(s) | 1846, 2478 |
| BmiI | GGNNCC | 5 cut(s) | 112, 204, 574, 1314, 2527 |
| BmrFI | CCNGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| BmrI | ACTGGG | 1 cut(s) | 384 |
| BmtI | GCTAGC | 1 cut(s) | 779 |
| BmuI | ACTGGG | 1 cut(s) | 384 |
| BpiI | GAAGAC | 5 cut(s) | 544, 922, 1570, 2205, 2441 |
| BpmI | CTGGAG | 3 cut(s) | 47, 126, 2360 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2241 |
| BpuEI | CTTGAG | 4 cut(s) | 500, 1076, 1247, 2930 |
| BsaHI | GRCGYC | 2 cut(s) | 2385, 2526 |
| BsaI | GGTCTC | 1 cut(s) | 2873 |
| BsaJI | CCNNGG | 7 cut(s) | 688, 972, 1153, 1548, 1849, 2747, 2924 |
| BsaWI | WCCGGW | 2 cut(s) | 1339, 1663 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 564, 594 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1642, 1791, 1962, 2475 |
| Bse118I | RCCGGY | 1 cut(s) | 1663 |
| Bse1I | ACTGG | 1 cut(s) | 390 |
| Bse3DI | GCAATG | 3 cut(s) | 272, 1023, 1990 |
| BseBI | CCWGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| BseDI | CCNNGG | 7 cut(s) | 688, 972, 1153, 1548, 1849, 2747, 2924 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1642, 1791, 1962, 2475 |
| BseMI | GCAATG | 3 cut(s) | 272, 1023, 1990 |
| BseNI | ACTGG | 1 cut(s) | 390 |
| BseRI | GAGGAG | 2 cut(s) | 239, 1436 |
| BseSI | GKGCMC | 1 cut(s) | 207 |
| BseXI | GCAGC | 6 cut(s) | 22, 642, 2358, 2404, 2476, 2720 |
| BseYI | CCCAGC | 1 cut(s) | 850 |
| BsgI | GTGCAG | 1 cut(s) | 848 |
| Bsh1236I | CGCG | 1 cut(s) | 2564 |
| BshFI | GGCC | 4 cut(s) | 24, 1220, 1749, 1848 |
| BshNI | GGYRCC | 4 cut(s) | 110, 202, 1312, 2525 |
| BshTI | ACCGGT | 1 cut(s) | 1663 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1182, 2455, 2496 |
| BsiSI | CCGG | 2 cut(s) | 1340, 1664 |
| BslFI | GGGAC | 1 cut(s) | 2372 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1642, 1791, 1962, 2475 |
| BsmAI | GTCTC | 4 cut(s) | 586, 1181, 1370, 2873 |
| BsmBI | CGTCTC | 1 cut(s) | 1181 |
| BsmFI | GGGAC | 1 cut(s) | 2372 |
| BsmI | GAATGC | 3 cut(s) | 73, 679, 2102 |
| BsnI | GGCC | 4 cut(s) | 24, 1220, 1749, 1848 |
| Bso31I | GGTCTC | 1 cut(s) | 2873 |
| Bsp1286I | GDGCHC | 4 cut(s) | 207, 1182, 2455, 2496 |
| Bsp1407I | TGTACA | 1 cut(s) | 527 |
| Bsp19I | CCATGG | 3 cut(s) | 972, 1153, 1849 |
| BspACI | CCGC | 3 cut(s) | 1021, 1458, 1844 |
| BspANI | GGCC | 4 cut(s) | 24, 1220, 1749, 1848 |
| BspFNI | CGCG | 1 cut(s) | 2564 |
| BspHI | TCATGA | 2 cut(s) | 175, 924 |
| BspLI | GGNNCC | 5 cut(s) | 112, 204, 574, 1314, 2527 |
| BspMI | ACCTGC | 1 cut(s) | 820 |
| BspOI | GCTAGC | 1 cut(s) | 779 |
| BspPI | GGATC | 5 cut(s) | 257, 617, 1350, 1806, 3029 |
| BspT107I | GGYRCC | 4 cut(s) | 110, 202, 1312, 2525 |
| BspTI | CTTAAG | 1 cut(s) | 1328 |
| BspTNI | GGTCTC | 1 cut(s) | 2873 |
| BsrDI | GCAATG | 3 cut(s) | 272, 1023, 1990 |
| BsrFI | RCCGGY | 1 cut(s) | 1663 |
| BsrGI | TGTACA | 1 cut(s) | 527 |
| BsrI | ACTGG | 1 cut(s) | 390 |
| BssAI | RCCGGY | 1 cut(s) | 1663 |
| BssECI | CCNNGG | 7 cut(s) | 688, 972, 1153, 1548, 1849, 2747, 2924 |
| BssNI | GRCGYC | 2 cut(s) | 2385, 2526 |
| BssT1I | CCWWGG | 6 cut(s) | 688, 972, 1153, 1849, 2747, 2924 |
| Bst2UI | CCWGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| Bst4CI | ACNGT | 2 cut(s) | 1699, 3020 |
| Bst6I | CTCTTC | 4 cut(s) | 216, 411, 1402, 1524 |
| BstACI | GRCGYC | 2 cut(s) | 2385, 2526 |
| BstAFI | CTTAAG | 1 cut(s) | 1328 |
| BstAUI | TGTACA | 1 cut(s) | 527 |
| BstC8I | GCNNGC | 5 cut(s) | 138, 777, 961, 1846, 2985 |
| BstDEI | CTNAG | 3 cut(s) | 2241, 2958, 2988 |
| BstDSI | CCRYGG | 3 cut(s) | 972, 1153, 1849 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1960 |
| BstFNI | CGCG | 1 cut(s) | 2564 |
| BstH2I | RGCGCY | 1 cut(s) | 2529 |
| BstHHI | GCGC | 3 cut(s) | 1081, 1906, 2528 |
| BstMAI | GTCTC | 4 cut(s) | 586, 1181, 1370, 2873 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 320, 1944, 2525 |
| BstNI | CCWGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| BstNSI | RCATGY | 4 cut(s) | 215, 1509, 1938, 2987 |
| BstSCI | CCNGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| BstSFI | CTRYAG | 1 cut(s) | 1957 |
| BstSLI | GKGCMC | 1 cut(s) | 207 |
| BstUI | CGCG | 1 cut(s) | 2564 |
| BstV1I | GCAGC | 6 cut(s) | 22, 642, 2358, 2404, 2476, 2720 |
| BstV2I | GAAGAC | 5 cut(s) | 544, 922, 1570, 2205, 2441 |
| BstX2I | RGATCY | 3 cut(s) | 262, 622, 785 |
| BstYI | RGATCY | 3 cut(s) | 262, 622, 785 |
| BsuI | GTATCC | 1 cut(s) | 1035 |
| BsuRI | GGCC | 4 cut(s) | 24, 1220, 1749, 1848 |
| BtgI | CCRYGG | 3 cut(s) | 972, 1153, 1849 |
| BtrI | CACGTC | 2 cut(s) | 1111, 1191 |
| BveI | ACCTGC | 1 cut(s) | 820 |
| Cac8I | GCNNGC | 5 cut(s) | 138, 777, 961, 1846, 2985 |
| CciI | TCATGA | 2 cut(s) | 175, 924 |
| CfoI | GCGC | 3 cut(s) | 1081, 1906, 2528 |
| Cfr10I | RCCGGY | 1 cut(s) | 1663 |
| Cfr13I | GGNCC | 2 cut(s) | 1846, 2478 |
| CsiI | ACCWGGT | 1 cut(s) | 1990 |
| Csp6I | GTAC | 6 cut(s) | 111, 528, 1885, 1995, 2255, 2919 |
| CspAI | ACCGGT | 1 cut(s) | 1663 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 285, 320 |
| CviQI | GTAC | 6 cut(s) | 111, 528, 1885, 1995, 2255, 2919 |
| DdeI | CTNAG | 3 cut(s) | 2241, 2958, 2988 |
| DinI | GGCGCC | 1 cut(s) | 2527 |
| DraI | TTTAAA | 2 cut(s) | 2124, 2154 |
| Eam1104I | CTCTTC | 4 cut(s) | 216, 411, 1402, 1524 |
| EarI | CTCTTC | 4 cut(s) | 216, 411, 1402, 1524 |
| Ecl136II | GAGCTC | 2 cut(s) | 1180, 2494 |
| Eco130I | CCWWGG | 6 cut(s) | 688, 972, 1153, 1849, 2747, 2924 |
| Eco147I | AGGCCT | 1 cut(s) | 24 |
| Eco24I | GRGCYC | 2 cut(s) | 1182, 2496 |
| Eco31I | GGTCTC | 1 cut(s) | 2873 |
| Eco32I | GATATC | 1 cut(s) | 1063 |
| Eco47I | GGWCC | 1 cut(s) | 2478 |
| Eco53kI | GAGCTC | 2 cut(s) | 1180, 2494 |
| EcoICRI | GAGCTC | 2 cut(s) | 1180, 2494 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1960 |
| EcoRI | GAATTC | 2 cut(s) | 892, 977 |
| EcoRII | CCWGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| EcoRV | GATATC | 1 cut(s) | 1063 |
| EcoT14I | CCWWGG | 6 cut(s) | 688, 972, 1153, 1849, 2747, 2924 |
| EcoT22I | ATGCAT | 1 cut(s) | 213 |
| EcoT38I | GRGCYC | 2 cut(s) | 1182, 2496 |
| EgeI | GGCGCC | 1 cut(s) | 2527 |
| EheI | GGCGCC | 1 cut(s) | 2527 |
| ErhI | CCWWGG | 6 cut(s) | 688, 972, 1153, 1849, 2747, 2924 |
| Esp3I | CGTCTC | 1 cut(s) | 1181 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 807, 839, 1787, 1819, 2405, 2437, 2908, 2940 |
| FaqI | GGGAC | 1 cut(s) | 2372 |
| FauI | CCCGC | 1 cut(s) | 1837 |
| FbaI | TGATCA | 2 cut(s) | 1822, 2701 |
| FblI | GTMKAC | 1 cut(s) | 954 |
| Fnu4HI | GCNGC | 6 cut(s) | 11, 631, 2372, 2418, 2465, 2709 |
| FriOI | GRGCYC | 2 cut(s) | 1182, 2496 |
| Fsp4HI | GCNGC | 6 cut(s) | 11, 631, 2372, 2418, 2465, 2709 |
| FspBI | CTAG | 7 cut(s) | 408, 689, 740, 776, 1616, 2217, 2448 |
| FspI | TGCGCA | 2 cut(s) | 1080, 1905 |
| GlaI | GCGC | 3 cut(s) | 1080, 1905, 2527 |
| GluI | GCNGC | 6 cut(s) | 11, 631, 2372, 2418, 2465, 2709 |
| GsaI | CCCAGC | 1 cut(s) | 854 |
| GsuI | CTGGAG | 3 cut(s) | 47, 126, 2360 |
| HaeII | RGCGCY | 1 cut(s) | 2529 |
| HaeIII | GGCC | 4 cut(s) | 24, 1220, 1749, 1848 |
| HapII | CCGG | 2 cut(s) | 1340, 1664 |
| HhaI | GCGC | 3 cut(s) | 1081, 1906, 2528 |
| Hin1I | GRCGYC | 2 cut(s) | 2385, 2526 |
| Hin6I | GCGC | 3 cut(s) | 1079, 1904, 2526 |
| HinP1I | GCGC | 3 cut(s) | 1079, 1904, 2526 |
| HindIII | AAGCTT | 2 cut(s) | 98, 312 |
| HpaII | CCGG | 2 cut(s) | 1340, 1664 |
| Hpy166II | GTNNAC | 5 cut(s) | 89, 332, 528, 955, 2944 |
| Hpy188I | TCNGA | 9 cut(s) | 340, 801, 1518, 1645, 1690, 1893, 2029, 2512, 2583 |
| Hpy8I | GTNNAC | 5 cut(s) | 89, 332, 528, 955, 2944 |
| HpyCH4III | ACNGT | 2 cut(s) | 1699, 3020 |
| HpyCH4IV | ACGT | 6 cut(s) | 705, 1110, 1190, 1240, 1997, 2385 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 320, 1944, 2525 |
| HpyF3I | CTNAG | 3 cut(s) | 2241, 2958, 2988 |
| HpySE526I | ACGT | 6 cut(s) | 705, 1110, 1190, 1240, 1997, 2385 |
| Hsp92I | GRCGYC | 2 cut(s) | 2385, 2526 |
| HspAI | GCGC | 3 cut(s) | 1079, 1904, 2526 |
| KasI | GGCGCC | 1 cut(s) | 2525 |
| KpnI | GGTACC | 1 cut(s) | 114 |
| Ksp22I | TGATCA | 2 cut(s) | 1822, 2701 |
| LmnI | GCTCC | 5 cut(s) | 37, 87, 572, 692, 2379 |
| Lsp1109I | GCAGC | 6 cut(s) | 22, 642, 2358, 2404, 2476, 2720 |
| MabI | ACCWGGT | 1 cut(s) | 1990 |
| MaeI | CTAG | 7 cut(s) | 408, 689, 740, 776, 1616, 2217, 2448 |
| MaeII | ACGT | 6 cut(s) | 705, 1110, 1190, 1240, 1997, 2385 |
| MaeIII | GTNAC | 5 cut(s) | 1335, 1367, 1659, 2168, 2179 |
| MfeI | CAATTG | 2 cut(s) | 1461, 2600 |
| MflI | RGATCY | 3 cut(s) | 262, 622, 785 |
| MhlI | GDGCHC | 4 cut(s) | 207, 1182, 2455, 2496 |
| Mly113I | GGCGCC | 1 cut(s) | 2526 |
| MlyI | GAGTC | 3 cut(s) | 1640, 1971, 2848 |
| MmeI | TCCRAC | 2 cut(s) | 550, 1095 |
| Mph1103I | ATGCAT | 1 cut(s) | 213 |
| MroXI | GAANNNNTTC | 1 cut(s) | 819 |
| MslI | CAYNNNNRTG | 4 cut(s) | 216, 1508, 1933, 2279 |
| MspCI | CTTAAG | 1 cut(s) | 1328 |
| MspI | CCGG | 2 cut(s) | 1340, 1664 |
| MspR9I | CCNGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| MunI | CAATTG | 2 cut(s) | 1461, 2600 |
| Mva1269I | GAATGC | 3 cut(s) | 73, 679, 2102 |
| MvaI | CCWGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| MvnI | CGCG | 1 cut(s) | 2564 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 320, 1944, 2525 |
| NarI | GGCGCC | 1 cut(s) | 2526 |
| NcoI | CCATGG | 3 cut(s) | 972, 1153, 1849 |
| NheI | GCTAGC | 1 cut(s) | 775 |
| NlaIV | GGNNCC | 5 cut(s) | 112, 204, 574, 1314, 2527 |
| NmuCI | GTSAC | 4 cut(s) | 1367, 1659, 2168, 2179 |
| NsbI | TGCGCA | 2 cut(s) | 1080, 1905 |
| NsiI | ATGCAT | 1 cut(s) | 213 |
| NspI | RCATGY | 4 cut(s) | 215, 1509, 1938, 2987 |
| OliI | CACNNNNGTG | 2 cut(s) | 1508, 2279 |
| PaeI | GCATGC | 1 cut(s) | 2987 |
| PagI | TCATGA | 2 cut(s) | 175, 924 |
| PceI | AGGCCT | 1 cut(s) | 24 |
| PciI | ACATGT | 1 cut(s) | 1505 |
| PctI | GAATGC | 3 cut(s) | 73, 679, 2102 |
| PdmI | GAANNNNTTC | 1 cut(s) | 819 |
| PfeI | GAWTC | 8 cut(s) | 881, 1211, 1306, 1519, 2138, 2328, 2755, 2764 |
| PfoI | TCCNGGA | 2 cut(s) | 103, 2334 |
| PinAI | ACCGGT | 1 cut(s) | 1663 |
| PkrI | GCNGC | 6 cut(s) | 12, 632, 2373, 2419, 2466, 2710 |
| PleI | GAGTC | 3 cut(s) | 1640, 1971, 2847 |
| PluTI | GGCGCC | 1 cut(s) | 2529 |
| PpsI | GAGTC | 3 cut(s) | 1640, 1971, 2847 |
| PscI | ACATGT | 1 cut(s) | 1505 |
| PshBI | ATTAAT | 3 cut(s) | 357, 462, 948 |
| Psp124BI | GAGCTC | 2 cut(s) | 1182, 2496 |
| Psp6I | CCWGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| PspFI | CCCAGC | 1 cut(s) | 850 |
| PspGI | CCWGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| PspN4I | GGNNCC | 5 cut(s) | 112, 204, 574, 1314, 2527 |
| PspPI | GGNCC | 2 cut(s) | 1846, 2478 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2514, 2546 |
| PsuI | RGATCY | 3 cut(s) | 262, 622, 785 |
| RsaI | GTAC | 6 cut(s) | 112, 529, 1886, 1996, 2256, 2920 |
| RsaNI | GTAC | 6 cut(s) | 111, 528, 1885, 1995, 2255, 2919 |
| RseI | CAYNNNNRTG | 4 cut(s) | 216, 1508, 1933, 2279 |
| SacI | GAGCTC | 2 cut(s) | 1182, 2496 |
| SatI | GCNGC | 6 cut(s) | 11, 631, 2372, 2418, 2465, 2709 |
| Sau96I | GGNCC | 2 cut(s) | 1846, 2478 |
| ScaI | AGTACT | 1 cut(s) | 2920 |
| SchI | GAGTC | 3 cut(s) | 1640, 1971, 2848 |
| ScrFI | CCNGG | 7 cut(s) | 26, 93, 105, 627, 1549, 1992, 2336 |
| SduI | GDGCHC | 4 cut(s) | 207, 1182, 2455, 2496 |
| SexAI | ACCWGGT | 1 cut(s) | 1990 |
| SfcI | CTRYAG | 1 cut(s) | 1957 |
| SfoI | GGCGCC | 1 cut(s) | 2527 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1663 |
| SinI | GGWCC | 1 cut(s) | 2478 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 216, 1508, 1933, 2279 |
| SmlI | CTYRAG | 5 cut(s) | 515, 1091, 1226, 1328, 2909 |
| SmoI | CTYRAG | 5 cut(s) | 515, 1091, 1226, 1328, 2909 |
| SphI | GCATGC | 1 cut(s) | 2987 |
| SseBI | AGGCCT | 1 cut(s) | 24 |
| SsiI | CCGC | 3 cut(s) | 1021, 1458, 1844 |
| SspDI | GGCGCC | 1 cut(s) | 2525 |
| SspMI | CTAG | 7 cut(s) | 408, 689, 740, 776, 1616, 2217, 2448 |
| SstI | GAGCTC | 2 cut(s) | 1182, 2496 |
| StuI | AGGCCT | 1 cut(s) | 24 |
| StyD4I | CCNGG | 7 cut(s) | 24, 91, 103, 625, 1547, 1990, 2334 |
| StyI | CCWWGG | 6 cut(s) | 688, 972, 1153, 1849, 2747, 2924 |
| TaaI | ACNGT | 2 cut(s) | 1699, 3020 |
| TaiI | ACGT | 6 cut(s) | 708, 1113, 1193, 1243, 2000, 2388 |
| TaqI | TCGA | 2 cut(s) | 547, 981 |
| TatI | WGTACW | 2 cut(s) | 527, 2918 |
| TfiI | GAWTC | 8 cut(s) | 881, 1211, 1306, 1519, 2138, 2328, 2755, 2764 |
| TseFI | GTSAC | 4 cut(s) | 1367, 1659, 2168, 2179 |
| TseI | GCWGC | 6 cut(s) | 10, 630, 2371, 2417, 2464, 2708 |
| Tsp45I | GTSAC | 4 cut(s) | 1367, 1659, 2168, 2179 |
| TspGWI | ACGGA | 1 cut(s) | 74 |
| Vha464I | CTTAAG | 1 cut(s) | 1328 |
| VpaK11BI | GGWCC | 1 cut(s) | 2478 |
| VspI | ATTAAT | 3 cut(s) | 357, 462, 948 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1960 |
| XceI | RCATGY | 4 cut(s) | 215, 1509, 1938, 2987 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1245 |
| XmaJI | CCTAGG | 1 cut(s) | 688 |
| XmiI | GTMKAC | 1 cut(s) | 954 |
| XmnI | GAANNNNTTC | 1 cut(s) | 819 |
| XspI | CTAG | 7 cut(s) | 408, 689, 740, 776, 1616, 2217, 2448 |
| ZraI | GACGTC | 1 cut(s) | 2386 |
| ZrmI | AGTACT | 1 cut(s) | 2920 |
| Zsp2I | ATGCAT | 1 cut(s) | 213 |