protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 491 - 610 | 7.2e-21 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 476, 1337, 1581 |
| Acc36I | ACCTGC | 3 cut(s) | 529, 1390, 2361 |
| AccB1I | GGYRCC | 1 cut(s) | 1676 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 892, 1197 |
| AccI | GTMKAC | 1 cut(s) | 628 |
| AccII | CGCG | 1 cut(s) | 947 |
| AccIII | TCCGGA | 2 cut(s) | 1418, 1610 |
| AciI | CCGC | 4 cut(s) | 5, 294, 947, 1208 |
| AclWI | GGATC | 6 cut(s) | 326, 810, 1536, 2225, 2238, 2369 |
| AcsI | RAATTY | 3 cut(s) | 252, 1583, 2341 |
| AcvI | CACGTG | 1 cut(s) | 1665 |
| AfaI | GTAC | 4 cut(s) | 1458, 1873, 2351, 2461 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 892, 1197, 1258, 1521, 2240, 2434, 2480, 2481, 2482 |
| AflII | CTTAAG | 1 cut(s) | 2477 |
| AflIII | ACRYGT | 1 cut(s) | 663 |
| AhlI | ACTAGT | 1 cut(s) | 2318 |
| AjiI | CACGTC | 1 cut(s) | 664 |
| AjnI | CCWGG | 4 cut(s) | 206, 334, 1548, 1644 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 159, 191 |
| AleI | CACNNNNGTG | 1 cut(s) | 1430 |
| AluBI | AGCT | 6 cut(s) | 1131, 1286, 1453, 1634, 2027, 2387 |
| AluI | AGCT | 6 cut(s) | 1131, 1286, 1453, 1634, 2027, 2387 |
| Alw21I | GWGCWC | 1 cut(s) | 1182 |
| Alw26I | GTCTC | 3 cut(s) | 1844, 1958, 2112 |
| AlwI | GGATC | 6 cut(s) | 326, 810, 1536, 2225, 2238, 2369 |
| Ama87I | CYCGRG | 1 cut(s) | 824 |
| Aor13HI | TCCGGA | 2 cut(s) | 1418, 1610 |
| AoxI | GGCC | 2 cut(s) | 948, 2265 |
| ApeKI | GCWGC | 4 cut(s) | 7, 1039, 2138, 2413 |
| ApoI | RAATTY | 3 cut(s) | 252, 1583, 2341 |
| AseI | ATTAAT | 3 cut(s) | 411, 708, 2154 |
| AspS9I | GGNCC | 7 cut(s) | 748, 949, 1200, 1552, 1642, 2265, 2515 |
| AsuHPI | GGTGA | 4 cut(s) | 464, 1383, 1444, 1756 |
| AsuII | TTCGAA | 2 cut(s) | 68, 157 |
| AvaI | CYCGRG | 1 cut(s) | 824 |
| AvaII | GGWCC | 5 cut(s) | 748, 1200, 1552, 1642, 2515 |
| AxyI | CCTNAGG | 1 cut(s) | 37 |
| BaeGI | GKGCMC | 2 cut(s) | 207, 1670 |
| BamHI | GGATCC | 1 cut(s) | 2230 |
| BanI | GGYRCC | 1 cut(s) | 1676 |
| BauI | CACGAG | 1 cut(s) | 1278 |
| BbrPI | CACGTG | 1 cut(s) | 1665 |
| BbsI | GAAGAC | 2 cut(s) | 1158, 2166 |
| Bbv12I | GWGCWC | 1 cut(s) | 1182 |
| BbvCI | CCTCAGC | 2 cut(s) | 2028, 2388 |
| BbvI | GCAGC | 4 cut(s) | 19, 1051, 2125, 2425 |
| BceAI | ACGGC | 1 cut(s) | 904 |
| BciT130I | CCWGG | 4 cut(s) | 208, 336, 1550, 1646 |
| BciVI | GTATCC | 2 cut(s) | 142, 301 |
| BcoDI | GTCTC | 3 cut(s) | 1844, 1958, 2112 |
| BcuI | ACTAGT | 1 cut(s) | 2318 |
| BfaI | CTAG | 8 cut(s) | 243, 372, 623, 1071, 1128, 1562, 2111, 2319 |
| BfmI | CTRYAG | 2 cut(s) | 561, 2354 |
| BfrI | CTTAAG | 1 cut(s) | 2477 |
| BfuAI | ACCTGC | 3 cut(s) | 529, 1390, 2361 |
| BfuI | GTATCC | 2 cut(s) | 142, 301 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1674 |
| BisI | GCNGC | 6 cut(s) | 5, 8, 948, 1040, 2139, 2414 |
| BlsI | GCNGC | 6 cut(s) | 6, 9, 949, 1041, 2140, 2415 |
| Bme1390I | CCNGG | 4 cut(s) | 208, 336, 1550, 1646 |
| Bme18I | GGWCC | 5 cut(s) | 748, 1200, 1552, 1642, 2515 |
| BmeT110I | CYCGRG | 1 cut(s) | 824 |
| BmgBI | CACGTC | 1 cut(s) | 664 |
| BmgT120I | GGNCC | 7 cut(s) | 748, 949, 1200, 1552, 1642, 2265, 2515 |
| BmiI | GGNNCC | 4 cut(s) | 1267, 1678, 2232, 2516 |
| BmrFI | CCNGG | 4 cut(s) | 208, 336, 1550, 1646 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1891 |
| BpiI | GAAGAC | 2 cut(s) | 1158, 2166 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 586, 618 |
| BpmI | CTGGAG | 2 cut(s) | 1620, 2202 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2028, 2388 |
| Bpu14I | TTCGAA | 2 cut(s) | 68, 157 |
| BpuEI | CTTGAG | 4 cut(s) | 542, 974, 1073, 1910 |
| BsaAI | YACGTR | 1 cut(s) | 1665 |
| BsaWI | WCCGGW | 2 cut(s) | 1418, 1610 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1413, 1443 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 892, 1197, 1258, 1521, 2240, 2434, 2480, 2481, 2482 |
| Bse118I | RCCGGY | 1 cut(s) | 1574 |
| Bse1I | ACTGG | 1 cut(s) | 2196 |
| Bse21I | CCTNAGG | 1 cut(s) | 37 |
| Bse3DI | GCAATG | 5 cut(s) | 608, 1538, 1720, 1825, 1918 |
| BseAI | TCCGGA | 2 cut(s) | 1418, 1610 |
| BseBI | CCWGG | 4 cut(s) | 208, 336, 1550, 1646 |
| BseGI | GGATG | 7 cut(s) | 25, 29, 532, 1202, 1248, 1798, 2443 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 892, 1197, 1258, 1521, 2240, 2434, 2480, 2481, 2482 |
| BseMI | GCAATG | 5 cut(s) | 608, 1538, 1720, 1825, 1918 |
| BseMII | CTCAG | 5 cut(s) | 51, 2019, 2379, 2544, 2594 |
| BseNI | ACTGG | 1 cut(s) | 2196 |
| BseRI | GAGGAG | 2 cut(s) | 1274, 2045 |
| BseSI | GKGCMC | 2 cut(s) | 207, 1670 |
| BseXI | GCAGC | 4 cut(s) | 19, 1051, 2125, 2425 |
| BsgI | GTGCAG | 3 cut(s) | 557, 1058, 1418 |
| Bsh1236I | CGCG | 1 cut(s) | 947 |
| BshFI | GGCC | 2 cut(s) | 950, 2267 |
| BshNI | GGYRCC | 1 cut(s) | 1676 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1182 |
| BsiHKCI | CYCGRG | 1 cut(s) | 824 |
| BsiSI | CCGG | 3 cut(s) | 1419, 1575, 1611 |
| BslFI | GGGAC | 4 cut(s) | 35, 713, 1212, 2528 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 892, 1197, 1258, 1521, 2240, 2434, 2480, 2481, 2482 |
| BsmAI | GTCTC | 3 cut(s) | 1844, 1958, 2112 |
| BsmFI | GGGAC | 4 cut(s) | 35, 713, 1212, 2528 |
| BsmI | GAATGC | 1 cut(s) | 2085 |
| BsnI | GGCC | 2 cut(s) | 950, 2267 |
| BsoBI | CYCGRG | 1 cut(s) | 824 |
| Bsp119I | TTCGAA | 2 cut(s) | 68, 157 |
| Bsp1286I | GDGCHC | 3 cut(s) | 207, 1182, 1670 |
| Bsp13I | TCCGGA | 2 cut(s) | 1418, 1610 |
| Bsp143I | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| Bsp19I | CCATGG | 2 cut(s) | 684, 2642 |
| BspACI | CCGC | 4 cut(s) | 5, 294, 947, 1208 |
| BspANI | GGCC | 2 cut(s) | 950, 2267 |
| BspCNI | CTCAG | 5 cut(s) | 50, 2020, 2380, 2545, 2595 |
| BspEI | TCCGGA | 2 cut(s) | 1418, 1610 |
| BspFNI | CGCG | 1 cut(s) | 947 |
| BspHI | TCATGA | 1 cut(s) | 636 |
| BspLI | GGNNCC | 4 cut(s) | 1267, 1678, 2232, 2516 |
| BspMAI | CTGCAG | 2 cut(s) | 565, 2358 |
| BspMI | ACCTGC | 3 cut(s) | 529, 1390, 2361 |
| BspPI | GGATC | 6 cut(s) | 326, 810, 1536, 2225, 2238, 2369 |
| BspT104I | TTCGAA | 2 cut(s) | 68, 157 |
| BspT107I | GGYRCC | 1 cut(s) | 1676 |
| BspTI | CTTAAG | 1 cut(s) | 2477 |
| BsrDI | GCAATG | 5 cut(s) | 608, 1538, 1720, 1825, 1918 |
| BsrFI | RCCGGY | 1 cut(s) | 1574 |
| BsrI | ACTGG | 1 cut(s) | 2196 |
| BssAI | RCCGGY | 1 cut(s) | 1574 |
| BssMI | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| BssSI | CACGAG | 1 cut(s) | 1278 |
| BssT1I | CCWWGG | 7 cut(s) | 448, 510, 684, 1203, 1672, 2546, 2642 |
| Bst2BI | CACGAG | 1 cut(s) | 1278 |
| Bst2UI | CCWGG | 4 cut(s) | 208, 336, 1550, 1646 |
| Bst4CI | ACNGT | 2 cut(s) | 1429, 2050 |
| Bst6I | CTCTTC | 1 cut(s) | 2492 |
| BstAFI | CTTAAG | 1 cut(s) | 2477 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2135 |
| BstBAI | YACGTR | 1 cut(s) | 1665 |
| BstBI | TTCGAA | 2 cut(s) | 68, 157 |
| BstC8I | GCNNGC | 2 cut(s) | 883, 1241 |
| BstDEI | CTNAG | 7 cut(s) | 37, 577, 835, 2028, 2388, 2553, 2603 |
| BstDSI | CCRYGG | 3 cut(s) | 684, 886, 2642 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1256 |
| BstF5I | GGATG | 7 cut(s) | 25, 29, 532, 1202, 1248, 1798, 2443 |
| BstFNI | CGCG | 1 cut(s) | 947 |
| BstKTI | GATC | 9 cut(s) | 334, 493, 805, 1105, 1531, 1825, 2006, 2233, 2364 |
| BstMAI | GTCTC | 3 cut(s) | 1844, 1958, 2112 |
| BstMBI | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 619, 1245, 1674, 2080, 2135 |
| BstNI | CCWGG | 4 cut(s) | 208, 336, 1550, 1646 |
| BstNSI | RCATGY | 3 cut(s) | 391, 1239, 1243 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1891 |
| BstSCI | CCNGG | 4 cut(s) | 206, 334, 1548, 1644 |
| BstSFI | CTRYAG | 2 cut(s) | 561, 2354 |
| BstSLI | GKGCMC | 2 cut(s) | 207, 1670 |
| BstUI | CGCG | 1 cut(s) | 947 |
| BstV1I | GCAGC | 4 cut(s) | 19, 1051, 2125, 2425 |
| BstV2I | GAAGAC | 2 cut(s) | 1158, 2166 |
| BstX2I | RGATCY | 2 cut(s) | 331, 2230 |
| BstYI | RGATCY | 2 cut(s) | 331, 2230 |
| Bsu36I | CCTNAGG | 1 cut(s) | 37 |
| BsuI | GTATCC | 2 cut(s) | 142, 301 |
| BsuRI | GGCC | 2 cut(s) | 950, 2267 |
| BtgI | CCRYGG | 3 cut(s) | 684, 886, 2642 |
| BtgZI | GCGATG | 1 cut(s) | 1229 |
| BtrI | CACGTC | 1 cut(s) | 664 |
| BtsCI | GGATG | 7 cut(s) | 25, 29, 532, 1202, 1248, 1798, 2443 |
| BveI | ACCTGC | 3 cut(s) | 529, 1390, 2361 |
| Cac8I | GCNNGC | 2 cut(s) | 883, 1241 |
| CciI | TCATGA | 1 cut(s) | 636 |
| Cfr10I | RCCGGY | 1 cut(s) | 1574 |
| Cfr13I | GGNCC | 7 cut(s) | 748, 949, 1200, 1552, 1642, 2265, 2515 |
| Csp6I | GTAC | 4 cut(s) | 1457, 1872, 2350, 2460 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1293, 1328, 1450, 1485 |
| CviQI | GTAC | 4 cut(s) | 1457, 1872, 2350, 2460 |
| DdeI | CTNAG | 7 cut(s) | 37, 577, 835, 2028, 2388, 2553, 2603 |
| DpnI | GATC | 9 cut(s) | 333, 492, 804, 1104, 1530, 1824, 2005, 2232, 2363 |
| DpnII | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| DraI | TTTAAA | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 2492 |
| EarI | CTCTTC | 1 cut(s) | 2492 |
| EciI | GGCGGA | 1 cut(s) | 1223 |
| Eco130I | CCWWGG | 7 cut(s) | 448, 510, 684, 1203, 1672, 2546, 2642 |
| Eco32I | GATATC | 1 cut(s) | 1213 |
| Eco47I | GGWCC | 5 cut(s) | 748, 1200, 1552, 1642, 2515 |
| Eco72I | CACGTG | 1 cut(s) | 1665 |
| Eco81I | CCTNAGG | 1 cut(s) | 37 |
| Eco88I | CYCGRG | 1 cut(s) | 824 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1256 |
| EcoRII | CCWGG | 4 cut(s) | 206, 334, 1548, 1644 |
| EcoRV | GATATC | 1 cut(s) | 1213 |
| EcoT14I | CCWWGG | 7 cut(s) | 448, 510, 684, 1203, 1672, 2546, 2642 |
| EcoT22I | ATGCAT | 8 cut(s) | 389, 439, 798, 1241, 1245, 1742, 1918, 2023 |
| ErhI | CCWWGG | 7 cut(s) | 448, 510, 684, 1203, 1672, 2546, 2642 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1517, 1549, 2068, 2100 |
| FaqI | GGGAC | 4 cut(s) | 35, 713, 1212, 2528 |
| FblI | GTMKAC | 1 cut(s) | 628 |
| Fnu4HI | GCNGC | 6 cut(s) | 5, 8, 948, 1040, 2139, 2414 |
| FokI | GGATG | 7 cut(s) | 12, 16, 539, 1209, 1235, 1805, 2450 |
| Fsp4HI | GCNGC | 6 cut(s) | 5, 8, 948, 1040, 2139, 2414 |
| FspBI | CTAG | 8 cut(s) | 243, 372, 623, 1071, 1128, 1562, 2111, 2319 |
| GluI | GCNGC | 6 cut(s) | 5, 8, 948, 1040, 2139, 2414 |
| GsuI | CTGGAG | 2 cut(s) | 1620, 2202 |
| HaeIII | GGCC | 2 cut(s) | 950, 2267 |
| HapII | CCGG | 3 cut(s) | 1419, 1575, 1611 |
| HincII | GTYRAC | 2 cut(s) | 629, 2623 |
| HindII | GTYRAC | 2 cut(s) | 629, 2623 |
| HpaII | CCGG | 3 cut(s) | 1419, 1575, 1611 |
| HphI | GGTGA | 4 cut(s) | 464, 1383, 1444, 1756 |
| Hpy166II | GTNNAC | 5 cut(s) | 172, 629, 669, 2381, 2623 |
| Hpy188I | TCNGA | 7 cut(s) | 724, 1107, 1375, 1759, 1921, 2134, 2554 |
| Hpy8I | GTNNAC | 5 cut(s) | 172, 629, 669, 2381, 2623 |
| Hpy99I | CGWCG | 3 cut(s) | 1296, 2050, 2577 |
| HpyCH4III | ACNGT | 2 cut(s) | 1429, 2050 |
| HpyCH4IV | ACGT | 3 cut(s) | 663, 1291, 1664 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 619, 1245, 1674, 2080, 2135 |
| HpyF3I | CTNAG | 7 cut(s) | 37, 577, 835, 2028, 2388, 2553, 2603 |
| HpySE526I | ACGT | 3 cut(s) | 663, 1291, 1664 |
| Kpn2I | TCCGGA | 2 cut(s) | 1418, 1610 |
| Kzo9I | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| LmnI | GCTCC | 5 cut(s) | 607, 851, 1177, 1265, 1639 |
| Lsp1109I | GCAGC | 4 cut(s) | 19, 1051, 2125, 2425 |
| MaeI | CTAG | 8 cut(s) | 243, 372, 623, 1071, 1128, 1562, 2111, 2319 |
| MaeII | ACGT | 3 cut(s) | 663, 1291, 1664 |
| MaeIII | GTNAC | 8 cut(s) | 312, 1020, 1073, 1389, 1423, 1471, 1893, 2522 |
| MalI | GATC | 9 cut(s) | 333, 492, 804, 1104, 1530, 1824, 2005, 2232, 2363 |
| MboI | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| MfeI | CAATTG | 5 cut(s) | 360, 482, 741, 1032, 1845 |
| MflI | RGATCY | 2 cut(s) | 331, 2230 |
| MhlI | GDGCHC | 3 cut(s) | 207, 1182, 1670 |
| MlyI | GAGTC | 4 cut(s) | 525, 965, 1431, 1901 |
| MmeI | TCCRAC | 2 cut(s) | 1293, 2208 |
| Mph1103I | ATGCAT | 8 cut(s) | 389, 439, 798, 1241, 1245, 1742, 1918, 2023 |
| MroI | TCCGGA | 2 cut(s) | 1418, 1610 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1238, 1430 |
| MspCI | CTTAAG | 1 cut(s) | 2477 |
| MspI | CCGG | 3 cut(s) | 1419, 1575, 1611 |
| MspR9I | CCNGG | 4 cut(s) | 208, 336, 1550, 1646 |
| MunI | CAATTG | 5 cut(s) | 360, 482, 741, 1032, 1845 |
| Mva1269I | GAATGC | 1 cut(s) | 2085 |
| MvaI | CCWGG | 4 cut(s) | 208, 336, 1550, 1646 |
| MvnI | CGCG | 1 cut(s) | 947 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 619, 1245, 1674, 2080, 2135 |
| NcoI | CCATGG | 2 cut(s) | 684, 2642 |
| NdeII | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| NlaIV | GGNNCC | 4 cut(s) | 1267, 1678, 2232, 2516 |
| NmuCI | GTSAC | 5 cut(s) | 1073, 1389, 1423, 1471, 1893 |
| NsiI | ATGCAT | 8 cut(s) | 389, 439, 798, 1241, 1245, 1742, 1918, 2023 |
| NspI | RCATGY | 3 cut(s) | 391, 1239, 1243 |
| NspV | TTCGAA | 2 cut(s) | 68, 157 |
| OliI | CACNNNNGTG | 1 cut(s) | 1430 |
| PaeI | GCATGC | 1 cut(s) | 1243 |
| PaeR7I | CTCGAG | 1 cut(s) | 824 |
| PagI | TCATGA | 1 cut(s) | 636 |
| PctI | GAATGC | 1 cut(s) | 2085 |
| PfeI | GAWTC | 6 cut(s) | 590, 779, 873, 896, 1001, 2577 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 892, 1197 |
| PfoI | TCCNGGA | 1 cut(s) | 1548 |
| PkrI | GCNGC | 6 cut(s) | 6, 9, 949, 1041, 2140, 2415 |
| PleI | GAGTC | 4 cut(s) | 524, 964, 1430, 1900 |
| PmaCI | CACGTG | 1 cut(s) | 1665 |
| PmlI | CACGTG | 1 cut(s) | 1665 |
| PpsI | GAGTC | 4 cut(s) | 524, 964, 1430, 1900 |
| Ppu21I | YACGTR | 1 cut(s) | 1665 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1891 |
| PshBI | ATTAAT | 3 cut(s) | 411, 708, 2154 |
| PsiI | TTATAA | 3 cut(s) | 476, 1337, 1581 |
| Psp6I | CCWGG | 4 cut(s) | 206, 334, 1548, 1644 |
| PspCI | CACGTG | 1 cut(s) | 1665 |
| PspGI | CCWGG | 4 cut(s) | 206, 334, 1548, 1644 |
| PspN4I | GGNNCC | 4 cut(s) | 1267, 1678, 2232, 2516 |
| PspPI | GGNCC | 7 cut(s) | 748, 949, 1200, 1552, 1642, 2265, 2515 |
| PspXI | VCTCGAGB | 1 cut(s) | 824 |
| PstI | CTGCAG | 2 cut(s) | 565, 2358 |
| PsuI | RGATCY | 2 cut(s) | 331, 2230 |
| RsaI | GTAC | 4 cut(s) | 1458, 1873, 2351, 2461 |
| RsaNI | GTAC | 4 cut(s) | 1457, 1872, 2350, 2460 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1238, 1430 |
| SalI | GTCGAC | 1 cut(s) | 627 |
| SatI | GCNGC | 6 cut(s) | 5, 8, 948, 1040, 2139, 2414 |
| Sau3AI | GATC | 9 cut(s) | 331, 490, 802, 1102, 1528, 1822, 2003, 2230, 2361 |
| Sau96I | GGNCC | 7 cut(s) | 748, 949, 1200, 1552, 1642, 2265, 2515 |
| SbfI | CCTGCAGG | 1 cut(s) | 2358 |
| SchI | GAGTC | 4 cut(s) | 525, 965, 1431, 1901 |
| ScrFI | CCNGG | 4 cut(s) | 208, 336, 1550, 1646 |
| SdaI | CCTGCAGG | 1 cut(s) | 2358 |
| SduI | GDGCHC | 3 cut(s) | 207, 1182, 1670 |
| SfcI | CTRYAG | 2 cut(s) | 561, 2354 |
| Sfr274I | CTCGAG | 1 cut(s) | 824 |
| SfuI | TTCGAA | 2 cut(s) | 68, 157 |
| SinI | GGWCC | 5 cut(s) | 748, 1200, 1552, 1642, 2515 |
| SlaI | CTCGAG | 1 cut(s) | 824 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1238, 1430 |
| SmlI | CTYRAG | 6 cut(s) | 521, 824, 953, 1052, 1889, 2477 |
| SmoI | CTYRAG | 6 cut(s) | 521, 824, 953, 1052, 1889, 2477 |
| SpeI | ACTAGT | 1 cut(s) | 2318 |
| SphI | GCATGC | 1 cut(s) | 1243 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2358 |
| SsiI | CCGC | 4 cut(s) | 5, 294, 947, 1208 |
| SspMI | CTAG | 8 cut(s) | 243, 372, 623, 1071, 1128, 1562, 2111, 2319 |
| StyD4I | CCNGG | 4 cut(s) | 206, 334, 1548, 1644 |
| StyI | CCWWGG | 7 cut(s) | 448, 510, 684, 1203, 1672, 2546, 2642 |
| TaaI | ACNGT | 2 cut(s) | 1429, 2050 |
| TaiI | ACGT | 3 cut(s) | 666, 1294, 1667 |
| TaqII | GACCGA | 1 cut(s) | 2215 |
| TauI | GCSGC | 2 cut(s) | 7, 950 |
| TfiI | GAWTC | 6 cut(s) | 590, 779, 873, 896, 1001, 2577 |
| TseFI | GTSAC | 5 cut(s) | 1073, 1389, 1423, 1471, 1893 |
| TseI | GCWGC | 4 cut(s) | 7, 1039, 2138, 2413 |
| Tsp45I | GTSAC | 5 cut(s) | 1073, 1389, 1423, 1471, 1893 |
| TspGWI | ACGGA | 3 cut(s) | 2256, 2541, 2647 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 892, 1197 |
| Vha464I | CTTAAG | 1 cut(s) | 2477 |
| VpaK11BI | GGWCC | 5 cut(s) | 748, 1200, 1552, 1642, 2515 |
| VspI | ATTAAT | 3 cut(s) | 411, 708, 2154 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1256 |
| XapI | RAATTY | 3 cut(s) | 252, 1583, 2341 |
| XbaI | TCTAGA | 1 cut(s) | 2110 |
| XceI | RCATGY | 3 cut(s) | 391, 1239, 1243 |
| XhoI | CTCGAG | 1 cut(s) | 824 |
| XmiI | GTMKAC | 1 cut(s) | 628 |
| XspI | CTAG | 8 cut(s) | 243, 372, 623, 1071, 1128, 1562, 2111, 2319 |
| Zsp2I | ATGCAT | 8 cut(s) | 389, 439, 798, 1241, 1245, 1742, 1918, 2023 |