transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 76 |
| AciI | CCGC | 2 cut(s) | 557, 617 |
| AclWI | GGATC | 1 cut(s) | 587 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 92, 275 |
| AfaI | GTAC | 1 cut(s) | 13 |
| AflII | CTTAAG | 1 cut(s) | 452 |
| AflIII | ACRYGT | 1 cut(s) | 499 |
| AgsI | TTSAA | 1 cut(s) | 569 |
| AjiI | CACGTC | 1 cut(s) | 229 |
| AluBI | AGCT | 3 cut(s) | 100, 410, 551 |
| AluI | AGCT | 3 cut(s) | 100, 410, 551 |
| Alw21I | GWGCWC | 2 cut(s) | 324, 488 |
| AlwI | GGATC | 1 cut(s) | 587 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| Aor13HI | TCCGGA | 1 cut(s) | 76 |
| AoxI | GGCC | 3 cut(s) | 3, 240, 581 |
| ApoI | RAATTY | 2 cut(s) | 92, 275 |
| AspLEI | GCGC | 1 cut(s) | 285 |
| AspS9I | GGNCC | 1 cut(s) | 240 |
| AsuHPI | GGTGA | 1 cut(s) | 55 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| Bbv12I | GWGCWC | 2 cut(s) | 324, 488 |
| BccI | CCATC | 2 cut(s) | 520, 526 |
| BfrI | CTTAAG | 1 cut(s) | 452 |
| BmgBI | CACGTC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 1 cut(s) | 240 |
| BmsI | GCATC | 5 cut(s) | 69, 145, 175, 363, 370 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| Bpu10I | CCTNAGC | 1 cut(s) | 270 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BseAI | TCCGGA | 1 cut(s) | 76 |
| BshFI | GGCC | 3 cut(s) | 5, 242, 583 |
| BsiHKAI | GWGCWC | 2 cut(s) | 324, 488 |
| BsiSI | CCGG | 1 cut(s) | 77 |
| BslFI | GGGAC | 1 cut(s) | 510 |
| BsmFI | GGGAC | 1 cut(s) | 510 |
| BsnI | GGCC | 3 cut(s) | 5, 242, 583 |
| Bsp1286I | GDGCHC | 2 cut(s) | 324, 488 |
| Bsp13I | TCCGGA | 1 cut(s) | 76 |
| Bsp143I | GATC | 1 cut(s) | 592 |
| BspACI | CCGC | 2 cut(s) | 557, 617 |
| BspANI | GGCC | 3 cut(s) | 5, 242, 583 |
| BspEI | TCCGGA | 1 cut(s) | 76 |
| BspPI | GGATC | 1 cut(s) | 587 |
| BspTI | CTTAAG | 1 cut(s) | 452 |
| BssMI | GATC | 1 cut(s) | 592 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 214 |
| BstAFI | CTTAAG | 1 cut(s) | 452 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 389 |
| BstC8I | GCNNGC | 2 cut(s) | 207, 549 |
| BstDEI | CTNAG | 2 cut(s) | 129, 270 |
| BstHHI | GCGC | 1 cut(s) | 285 |
| BstKTI | GATC | 1 cut(s) | 595 |
| BstMBI | GATC | 1 cut(s) | 592 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 389, 483, 580 |
| BstNSI | RCATGY | 1 cut(s) | 503 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BsuRI | GGCC | 3 cut(s) | 5, 242, 583 |
| BtrI | CACGTC | 1 cut(s) | 229 |
| Cac8I | GCNNGC | 2 cut(s) | 207, 549 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| CfoI | GCGC | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 1 cut(s) | 240 |
| Csp6I | GTAC | 1 cut(s) | 12 |
| CviAII | CATG | 7 cut(s) | 112, 137, 218, 232, 280, 297, 500 |
| CviQI | GTAC | 1 cut(s) | 12 |
| DdeI | CTNAG | 2 cut(s) | 129, 270 |
| DpnI | GATC | 1 cut(s) | 594 |
| DpnII | GATC | 1 cut(s) | 592 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoO109I | RGGNCCY | 1 cut(s) | 240 |
| EcoRI | GAATTC | 1 cut(s) | 275 |
| FaeI | CATG | 7 cut(s) | 115, 140, 221, 235, 283, 300, 503 |
| FaqI | GGGAC | 1 cut(s) | 510 |
| FatI | CATG | 7 cut(s) | 111, 136, 217, 231, 279, 296, 499 |
| FauI | CCCGC | 1 cut(s) | 610 |
| GlaI | GCGC | 1 cut(s) | 284 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| HaeIII | GGCC | 3 cut(s) | 5, 242, 583 |
| HapII | CCGG | 1 cut(s) | 77 |
| HhaI | GCGC | 1 cut(s) | 285 |
| Hin1II | CATG | 7 cut(s) | 115, 140, 221, 235, 283, 300, 503 |
| Hin6I | GCGC | 1 cut(s) | 283 |
| HinP1I | GCGC | 1 cut(s) | 283 |
| HinfI | GANTC | 1 cut(s) | 115 |
| HpaII | CCGG | 1 cut(s) | 77 |
| HphI | GGTGA | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 1 cut(s) | 252 |
| Hpy188I | TCNGA | 1 cut(s) | 319 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| Hpy8I | GTNNAC | 1 cut(s) | 252 |
| HpyAV | CCTTC | 3 cut(s) | 253, 335, 341 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 214 |
| HpyCH4IV | ACGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 4 cut(s) | 60, 166, 383, 392 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 389, 483, 580 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 270 |
| HpySE526I | ACGT | 1 cut(s) | 228 |
| Hsp92II | CATG | 7 cut(s) | 115, 140, 221, 235, 283, 300, 503 |
| HspAI | GCGC | 1 cut(s) | 283 |
| Kpn2I | TCCGGA | 1 cut(s) | 76 |
| Kzo9I | GATC | 1 cut(s) | 592 |
| LmnI | GCTCC | 2 cut(s) | 319, 529 |
| LpnPI | CCDG | 4 cut(s) | 72, 90, 93, 219 |
| LweI | GCATC | 5 cut(s) | 69, 145, 175, 363, 370 |
| MaeII | ACGT | 1 cut(s) | 228 |
| MaeIII | GTNAC | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 594 |
| MboI | GATC | 1 cut(s) | 592 |
| MboII | GAAGA | 2 cut(s) | 164, 233 |
| MhlI | GDGCHC | 2 cut(s) | 324, 488 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 92, 275, 425 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 4 cut(s) | 12, 253, 425, 460 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroI | TCCGGA | 1 cut(s) | 76 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 4 cut(s) | 236, 398, 453, 462 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspCI | CTTAAG | 1 cut(s) | 452 |
| MspI | CCGG | 1 cut(s) | 77 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 389, 483, 580 |
| NdeII | GATC | 1 cut(s) | 592 |
| NlaIII | CATG | 7 cut(s) | 115, 140, 221, 235, 283, 300, 503 |
| NmeAIII | GCCGAG | 1 cut(s) | 400 |
| NspI | RCATGY | 1 cut(s) | 503 |
| PciI | ACATGT | 1 cut(s) | 499 |
| PfeI | GAWTC | 1 cut(s) | 115 |
| PflFI | GACNNNGTC | 1 cut(s) | 227 |
| PscI | ACATGT | 1 cut(s) | 499 |
| PspPI | GGNCC | 1 cut(s) | 240 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| PsyI | GACNNNGTC | 1 cut(s) | 227 |
| RsaI | GTAC | 1 cut(s) | 13 |
| RsaNI | GTAC | 1 cut(s) | 12 |
| SaqAI | TTAA | 4 cut(s) | 236, 398, 453, 462 |
| Sau3AI | GATC | 1 cut(s) | 592 |
| Sau96I | GGNCC | 1 cut(s) | 240 |
| SduI | GDGCHC | 2 cut(s) | 324, 488 |
| SetI | ASST | 8 cut(s) | 68, 102, 231, 327, 412, 471, 553, 611 |
| SfaNI | GCATC | 5 cut(s) | 69, 145, 175, 363, 370 |
| SmlI | CTYRAG | 2 cut(s) | 170, 452 |
| SmoI | CTYRAG | 2 cut(s) | 170, 452 |
| Sse9I | AATT | 3 cut(s) | 92, 275, 425 |
| SsiI | CCGC | 2 cut(s) | 557, 617 |
| SspI | AATATT | 1 cut(s) | 338 |
| TaaI | ACNGT | 2 cut(s) | 11, 214 |
| TaiI | ACGT | 1 cut(s) | 231 |
| TaqI | TCGA | 1 cut(s) | 562 |
| TasI | AATT | 3 cut(s) | 92, 275, 425 |
| TfiI | GAWTC | 1 cut(s) | 115 |
| Tru1I | TTAA | 4 cut(s) | 236, 398, 453, 462 |
| Tru9I | TTAA | 4 cut(s) | 236, 398, 453, 462 |
| TspDTI | ATGAA | 7 cut(s) | 125, 215, 234, 268, 285, 360, 456 |
| TspGWI | ACGGA | 1 cut(s) | 164 |
| Tth111I | GACNNNGTC | 1 cut(s) | 227 |
| Vha464I | CTTAAG | 1 cut(s) | 452 |
| XapI | RAATTY | 2 cut(s) | 92, 275 |
| XceI | RCATGY | 1 cut(s) | 503 |