FvH4_4g14302

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000013
Physical Location & Seq
Reverse (-)
17907049 .. 17911578
4530 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14302.t1

Sequence Viewer

Length: 4002 bp
ATGAGCCTTGTGCAACAGTATGAGCCTTATGCATCAGGTTCTAAAAGAGGAGGTCTTTATGAGGTTAGTGCAAATACCAAGCTAGAAGAGCAAGTAGCAGCTTTGGAAAGACAGATGAAGAGCCTTACTCCTCTATTAAACAAGGTTGCAAAGGAGACTTGTGCCTTGTGTTCTAGTTTTTCACATACCACAGAAGCTTGTCCAGAACTTCATGGTGATGAGGAAGTCAATATGGTGAACAACTATGGAAGGCCAATGAATAATTTCTCTGGCAATAACTATAATTCGGGTTGGAGGCCACATCCGAATCTTTCTTATAGCAACAACAATCATGTGCAGATGCCAAGAAATAATCCTCCTATTCAGAATTATCAAGGGCCAAGTGAACAAAGAAAACCATCTCTCGAAGAAACTATGCAGCAACTTGCACAAAACCAGATAGAATTTCAAAAGTCCGATGCTCAGATGCTTCAAGCTATTCAAGAGACCAAGAAAGAGCAGCAAGTTCAATCTCAAGCTATTTCTAAGTTGGAAGTTCAAGTTGGGCAGATTGCCAATGCTTTGAATGAGAGAGAACAAGGGCGTTTCCCTAGCCAACCTCTTGTTAATCCGAGGGGTCAATTTGAGAAGCATGAGACTATGAAAGCTGTGATCATGTTGAGGAGTGGGAAAAAAGTTGATACCAATGTTCGTGAGAAGAGCTCCGAAGCCAGGATTGAAAAGACTGTTTCAATCCCGGGCAGAAAAACTGGTCAGAAACCAGCAACTTCCAGCAGTCCAGTGACGAATTTGAAGCCTCCTGCAGAGTCTCAATTTGTTCTTAAACCTCCATATCCAGAGTTGCTCCAGAAGCCAAAGAAAGATAGTCACTTGTCTGAGATTATGGAATTATTTCACAAGGTGCAGATTAATATTCCTTTGCTTGATGCTATTCAACAAATTCCAGCTTATGCGAAATTTTTGAAGGATTTATGCACTAACAAAAGGAGATTCAAAGACCATGAGAAAGTGTTGTTGTCAGAAGAGGTTAGTGCAGTGATTCAAAGGAGACTCCCTCCAAAGTTGAAGGACCCAAGAAGCTTTACAATACCTTGCACCATTGGTGATCATCACTTTGAGCGTGCTTTGATGGATTTGGGTGCTAGTGTCAACTTGATGCCGTGCTCATTGTTTATGAAACTAAAGCTTGGTGACTTGCAACCGACATCTATGACTTTGCAATTTGCAGATCGATTAGTCAAGCGACCGAAAGGAATTGTGGAAGATGTGTTGGTGAAGGTTGATAAGTTCATATTGCCTGCAGACTTTGTCATTCTTGAAATTGAACCAGATGGTTTTGATAAAGCAGAAGTGCCTATTATCTTGGGACATGCATTCATGGCTATCGCTGATAAGGTGATAAGAGCGAAGGATGGTAGTTTATCAATGAAAGTTGGTGACATGTCAGTGGAGTATAAAGTCTTTGAAGCTAGTCGACGTCCTTCGAATGATGGTAAATACTTTATGGTTAATTCCTTTTCTCCTATTACTCATGAAGCTTCTGTTCTGAATTCTTATAAAGATCCTCTTGAGATATGCTTGACACAAGCGATAATGGATTTTGATGCCAAGAAAGAAGTTGATAAGTTGGAAAAGCTTCTTAATGATGCACCCGTTCTTGAACCACGAAAGTGGAACCAATTTGAGTCTTTACCTTTGTCTACAAACAAAGTTGTGCCTTCCATTCAGCAAGCACCAAAGCTAGAGCTCAAACCGCTGCCCCAACACTTGAAGTATGTATTTTTGGGTGAGAGAGAGACACTACCGGTGATTATTGCTTCGGACCTTTGTGAAGAGGATGAAAAGAAGCTGTTGCAGGTTCTCCAAGCTCACAAAACAGCCATTGGGTGGTCCATTGCAGATATTAAAGGTATTAGTCCTACAATGTGTATGCACCGCATCCATCTTGAAGACAATGTGAAGCCAACACGTGATGCACAAAGGCATTTGAATCCACTAATGAAAGAAGTTGTGCGTGCTGAAATTTTGAAGCTTCTTGATGTTGGAGTTATATATCTAATTTCCAATAGTGAATGGGTGAGTCCAGTTCAAGTGGTGCCTAAGAAGTCAGGAATAACCGTTGGGAAGAATGAAAAAGATGAGTTGGTGCCTACAAGGGTCACTACGGGTTGGAGAGTTTGCATTGATTACCGGAAGCTCAATAGTGCCACACTGCTCAAAAGATGTCAAGAGACCAACCTTGTGCGTAATTGGGAGAAGTGCCATTTTATGGTCAAGCAAGGTATTGTGTTGGGCCATGTTGTTTCAAGTAAAGGCATTGAAGTTGACAAAGCAAAAGTGGATTTGATCACCAATCTTCCTCCGCCAACAACGGTTAAGGGAGTGTGTTCTTTCCTTGGTCATGCCGGGTTTTATCGGCATTTCATAAAGGATTTTAGCAAGGTTGCAGGGCCATTGAGCAATTTATTAGCAAAGGATGCAGAATTTATCTTTGATGAAGCATGTCTTGAGGCATTCAACAAGCTCAAGGCACTCCTCACTTCAGCTCCTATCATCAAGTCTCCAGATTGGAACTTACCGTTTGAATTAATGTGTGATGCACCAGATTATGCAGTGGGTGCTGTTTTGGGGCAGCGTATAGAGAGGCTTCCGCATGCTATTTATTATGCTTCAAAGACTTTGAATAATGCTCAGCTCAATTATTCCACCACAGAGAAAGAATTGCTTGCTGTTGTGTTTGGTTTAGACAAGTTCATATCGTATTTGATTGGTTCCAAGGTCATTGTTTACACTGATTATACTGCCCTTAAGTATTTACTTTCCAAGAAAGATGCAAAGCCAAGGCTGATCCTTTGGGTACTCTTACTTCAAGAATTTGATTTAGAGATTAAAGATAAAAGAGGAAGTGAGAATGTGGTGGCAGACCATTTGAGTAGATTGGTGCATGAAGAAGATGAAGTGGGCAGCCTTCCCTTGAATGAAAATTTTCCGGATGAGCAATTGTTTATGGTACGTGACTCTCCTCCTTGGTTTGCTCATATTGTGAACTTTATTATTACTAAGAAAATTCCAGAGCATTGGAGCAAGCAAGAGAGGGAAAAATTTCTTTCTCGAGTGAAGCGTTATATTTGGGATGAGCCATATTTATTCAAGCATTGTCCAGATCAGTTGATTAGAAGATGTGTACCTGAAAGTGAGTTTGAAAGCATTCTTCGATATGGCCATAGTTATGCTTGTGGTGGACATTTTAGGGTCAAGAAAACAGCAGCTAAAGTTCTTCAATGTGGTTTCTATTGGCCAACCTTATTTAAGGATGCTTTTGCCTTTTGCTCTTCATGTGATCGCTGCCAACGAATGGGTAATATCTCTAAACGTGACATGATGTTTTTGAATAATATTTTGGTGGTTGAATTATTTGATGTGTGGGGAATAGACTTCATGGGACCTTTCCCTCAATCTTTTGGCAATCTCTACATATTGGTGGCAGTAGATTATGTATCTAAATGGGTTGAGGCAGTTGCTTGTAAGACTAATGATCACAAGGTGAAGTATTCCATCACTCACAAAGCGGCTACACCATACCACCCTCAAACTAGTGGTCAAGTTGAGATTTCGAACCGCGAAATTAAGAATATTTTGGAGAAAACTGTTCGCCCGGATAGGAAGGATTGGTCTCAGCGTTTGAATGATGCTCTTTGGGCGTATAGAACAGCCTACAAAACCCCTATTGACATGTCGCCATATCAGTTAGTTTTTGGGAAGGCTTGTCATCTTTCGGTGGAGTTGGAACACCGAGCTTATTGGGCAATCAAGCACTACAATTTTGACATGAAGGCAGCTGGTGAAAGAAGAGCATTGCAGCTGAATGAGATGGAGGAAATTCGTAATGAGTCCTATGAGAATGCCAAGATTTACAAGGAGCGCACCAAGAAGTTTCATGACAAAGTCATTCGTCAAAAGACTTTTGAACCAAATCAAAAGGTGTTGCTATATAACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve

Protein Analysis

1334

Amino Acids

152.37

Weight (kDa)

8.78

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 832 - 929 1.7e-28 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 856 - 959 5.9e-31 RNase H-like domain found in reverse transcriptase
Integrase_H2C2 PF17921 1062 - 1119 2e-10 Integrase zinc binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000013)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00750
fragaria_vesca FvH4_1g09710 FvH4_1g27931 FvH4_1g27951 FvH4_1g27952 FvH4_1g27956 FvH4_1g28083 FvH4_1g28442 FvH4_1g28532 FvH4_1g29491 FvH4_1g29492 FvH4_1g29493 FvH4_1g29494 FvH4_1g29682 FvH4_1g29685 FvH4_1g29771 FvH4_2g08113 FvH4_2g08114 FvH4_2g14571 FvH4_2g22452 FvH4_2g35543 FvH4_3g01281 FvH4_3g19211 FvH4_3g19212 FvH4_3g19232 FvH4_3g21342 FvH4_3g21381 FvH4_3g22811 FvH4_3g26051 FvH4_3g26316 FvH4_3g26555 FvH4_3g31201 FvH4_3g31892 FvH4_3g32071 FvH4_3g36983 FvH4_3g40761 FvH4_3g44964 FvH4_3g44965 FvH4_4g02082 FvH4_4g03221 FvH4_4g05351 FvH4_4g05352 FvH4_4g08761 FvH4_4g08973 FvH4_4g09161 FvH4_4g09241 FvH4_4g09322 FvH4_4g10092 FvH4_4g10251 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14130 FvH4_4g14302 FvH4_4g14401 FvH4_4g14402 FvH4_4g14403 FvH4_4g14569 FvH4_4g15806 FvH4_4g15807 FvH4_4g15808 FvH4_4g16144 FvH4_4g16145 FvH4_4g16146 FvH4_4g17204 FvH4_4g17205 FvH4_4g17206 FvH4_4g17207 FvH4_4g17692 FvH4_4g24603 FvH4_5g22912 FvH4_5g34661 FvH4_6g00252 FvH4_6g00253 FvH4_6g18062 FvH4_6g22851 FvH4_6g22852 FvH4_6g32641 FvH4_6g36491 FvH4_6g36492 FvH4_6g37921 FvH4_6g48511 FvH4_7g01732 FvH4_7g01733 FvH4_7g03471 FvH4_7g04071 FvH4_7g04231 FvH4_7g12351 FvH4_7g14381 FvH4_7g20371 FvH4_7g20372 FvH4_7g22571 FvH4_7g25271 FvH4_7g25272 FvH4_7g25273
malus_domestica MD00G1099500.v1.1 MD00G1134900.v1.1 MD00G1199900.v1.1 MD02G1203700.v1.1 MD02G1206700.v1.1 MD07G1097600.v1.1 MD08G1099400.v1.1 MD08G1149900.v1.1 MD08G1150000.v1.1 MD08G1150100.v1.1 MD10G1200800.v1.1 MD15G1306700.v1.1 MD15G1306800.v1.1 MD15G1321900.v1.1 MD16G1251200.v1.1 MD17G1170700.v1.1 MD17G1170900.v1.1
pyrus_communis pycom01g00440 pycom01g00890 pycom01g01140 pycom01g01590 pycom01g01620 pycom01g01640 pycom01g01740 pycom01g02310 pycom01g02760 pycom01g03670 pycom01g04180 pycom01g04200 pycom02g18120 pycom02g18300 pycom02g22040 pycom03g09950 pycom03g10150 pycom03g11910 pycom03g11940 pycom03g18650 pycom04g06630 pycom04g06990 pycom04g07610 pycom04g07750 pycom04g08190 pycom04g09650 pycom04g10380 pycom04g12350 pycom04g12360 pycom05g01490 pycom05g03640 pycom05g06240 pycom05g06610 pycom05g08950 pycom06g05580 pycom06g06900 pycom06g07080 pycom07g10140 pycom07g10970 pycom07g13410 pycom07g15510 pycom07g15520 pycom08g13910 pycom09g12650 pycom09g13010 pycom09g13630 pycom09g13780 pycom09g13860 pycom09g14280 pycom10g07230 pycom1125g00040 pycom1153g00020 pycom11g09720 pycom11g09730 pycom11g09740 pycom11g16740 pycom11g17060 pycom11g20170 pycom1217g00060 pycom12382g00040 pycom12405g00030 pycom12406g00010 pycom12406g00020 pycom12419g00290 pycom12420g00030 pycom12420g00060 pycom12420g00070 pycom12420g00080 pycom12420g00110 pycom12423g00120 pycom12424g00040 pycom12424g00050 pycom12426g00020 pycom12426g00150 pycom12426g00160 pycom12426g00320 pycom12426g00650 pycom12426g00730 pycom12429g00030 pycom12439g00060 pycom12463g00030 pycom12468g00010 pycom12526g00030 pycom12526g00050 pycom12534g00010 pycom12556g00050 pycom12561g00280 pycom12568g00070 pycom12569g00010 pycom1256g00080 pycom1256g00120 pycom1256g00270 pycom1256g00280 pycom12575g00020 pycom12575g00060 pycom12577g00010 pycom12578g00010 pycom12589g00010 pycom12594g00010 pycom12596g00020 pycom12613g00040 pycom12613g00050 pycom12621g00020 pycom12630g00030 pycom12630g00090 pycom12633g00030 pycom12658g00080 pycom12659g00130 pycom12659g00240 pycom12661g00180 pycom12674g00010 pycom12675g00080 pycom12698g00020 pycom12g05860 pycom12g09040 pycom12g09680 pycom12g11990 pycom12g12930 pycom12g12940 pycom12g14090 pycom13g09490 pycom13g17080 pycom13g21650 pycom13g21860 pycom13g22080 pycom13g22290 pycom13g22300 pycom13g23220 pycom13g24040 pycom13g24190 pycom13g24790 pycom13g25360 pycom13g25680 pycom13g25770 pycom13g25780 pycom13g25910 pycom13g26110 pycom13g26270 pycom13g26380 pycom13g26390 pycom13g26480 pycom13g26920 pycom13g27220 pycom13g28550 pycom13g29330 pycom14g07990 pycom14g08020 pycom14g08690 pycom14g08860 pycom14g10000 pycom1534g00030 pycom15g21840 pycom15g29900 pycom15g31990 pycom15g34410 pycom1604g00100 pycom1667g00020 pycom16g19300 pycom16g21890 pycom16g21940 pycom1729g00050 pycom1729g00170 pycom1735g00030 pycom1735g00060 pycom1735g00080 pycom17g11600 pycom17g11920 pycom17g12980 pycom17g15280 pycom17g16060 pycom17g16510 pycom17g17570 pycom17g17580 pycom17g17590 pycom17g17710 pycom17g17720 pycom17g17940 pycom17g18100 pycom17g18550 pycom17g18810 pycom1844g00050 pycom1844g00060 pycom1845g00030 pycom1845g00090 pycom1866g00040 pycom1867g00030 pycom1880g00080 pycom1903g00030 pycom1903g00050 pycom1903g00080 pycom2002g00080 pycom2177g00050 pycom2205g00030 pycom2217g00050 pycom2229g00020 pycom243g00100 pycom2596g00020 pycom2751g00010 pycom2821g00080 pycom2933g00010 pycom2989g00010 pycom323g00010 pycom420g00370 pycom420g00380 pycom420g00830 pycom436g00020 pycom436g00090 pycom436g00250 pycom436g00320 pycom505g00020 pycom505g00060 pycom505g00070 pycom510g00040 pycom5153684g00020 pycom5153684g00460 pycom531g00010 pycom531g00020 pycom556g00100 pycom608g00070 pycom808g00020 pycom808g00390 pycom808g00430 pycom808g00440 pycom808g00660 pycom808g00690 pycom889g00020 pycom889g00070 pycom920g00010 pycom992g00020 pycom992g00030
rosa_chinensis RchiOBHm_Chr0c01g0497691 RchiOBHm_Chr0c36g0502941 RchiOBHm_Chr1g0320831 RchiOBHm_Chr1g0320841 RchiOBHm_Chr1g0344611 RchiOBHm_Chr1g0358301 RchiOBHm_Chr1g0381281 RchiOBHm_Chr1g0381291 RchiOBHm_Chr2g0117701 RchiOBHm_Chr2g0130161 RchiOBHm_Chr2g0130421 RchiOBHm_Chr2g0132971 RchiOBHm_Chr2g0133871 RchiOBHm_Chr2g0154881 RchiOBHm_Chr2g0154911 RchiOBHm_Chr3g0450421 RchiOBHm_Chr3g0452811 RchiOBHm_Chr3g0469711 RchiOBHm_Chr3g0493781 RchiOBHm_Chr3g0495801 RchiOBHm_Chr4g0404441 RchiOBHm_Chr4g0405891 RchiOBHm_Chr4g0410431 RchiOBHm_Chr4g0415841 RchiOBHm_Chr4g0418061 RchiOBHm_Chr5g0043631 RchiOBHm_Chr6g0272771 RchiOBHm_Chr7g0180211 RchiOBHm_Chr7g0193951
rosa_multiflora Rmu_co8039452.1_g000001 Rmu_co8083434.1_g000001 Rmu_co8112738.1_g000001 Rmu_co8202386.1_g000001 Rmu_co8313305.1_g000001 Rmu_sc0000007.1_g000025 Rmu_sc0000083.1_g000007 Rmu_sc0000322.1_g000029 Rmu_sc0000516.1_g000040 Rmu_sc0000621.1_g000033 Rmu_sc0000914.1_g000005 Rmu_sc0001136.1_g000005 Rmu_sc0001306.1_g000046 Rmu_sc0001438.1_g000017 Rmu_sc0001438.1_g000018 Rmu_sc0001504.1_g000001 Rmu_sc0001675.1_g000001 Rmu_sc0001678.1_g000001 Rmu_sc0002082.1_g000080 Rmu_sc0002206.1_g000035 Rmu_sc0002457.1_g000001 Rmu_sc0003002.1_g000012 Rmu_sc0003232.1_g000021 Rmu_sc0003376.1_g000002 Rmu_sc0003432.1_g000001 Rmu_sc0003574.1_g000002 Rmu_sc0003753.1_g000023 Rmu_sc0004239.1_g000003 Rmu_sc0004866.1_g000020 Rmu_sc0004904.1_g000009 Rmu_sc0005470.1_g000003 Rmu_sc0005835.1_g000005 Rmu_sc0005925.1_g000002 Rmu_sc0006358.1_g000001 Rmu_sc0006366.1_g000022 Rmu_sc0006401.1_g000001 Rmu_sc0006489.1_g000001 Rmu_sc0006652.1_g000001 Rmu_sc0007038.1_g000014 Rmu_sc0007067.1_g000001 Rmu_sc0007480.1_g000005 Rmu_sc0008412.1_g000001 Rmu_sc0008719.1_g000001 Rmu_sc0009019.1_g000001 Rmu_sc0009438.1_g000008 Rmu_sc0009785.1_g000015 Rmu_sc0010170.1_g000002 Rmu_sc0012567.1_g000001 Rmu_sc0014039.1_g000002 Rmu_sc0014727.1_g000003 Rmu_sc0016222.1_g000001 Rmu_sc0017735.1_g000001 Rmu_sc0017868.1_g000001 Rmu_sc0017956.1_g000001 Rmu_sc0018810.1_g000001 Rmu_sc0019109.1_g000001 Rmu_sc0020243.1_g000001 Rmu_sc0020660.1_g000001 Rmu_sc0022433.1_g000001 Rmu_sc0022595.1_g000001 Rmu_sc0023258.1_g000001 Rmu_sc0024488.1_g000001 Rmu_sc0025858.1_g000001 Rmu_sc0026481.1_g000003 Rmu_sc0028000.1_g000001 Rmu_sc0031652.1_g000001 Rmu_sc0032644.1_g000001 Rmu_sc0033297.1_g000001 Rmu_sc0040410.1_g000001 Rmu_sc0042790.1_g000002 Rmu_ssc0000011.1_g000053 Rmu_ssc0000089.1_g000019 Rmu_ssc0000350.1_g000017
rosa_roxburghii Rroxscaffold_10G00433140 Rroxscaffold_1G00030920 Rroxscaffold_1G00030960 Rroxscaffold_1G00031010 Rroxscaffold_2G00085620 Rroxscaffold_2G00117570 Rroxscaffold_2G00117640 Rroxscaffold_3G00239020 Rroxscaffold_3G00245490 Rroxscaffold_4G00318740 Rroxscaffold_5G00333750 Rroxscaffold_5G00351140 Rroxscaffold_5G00351170 Rroxscaffold_6G00391220 Rroxscaffold_6G00391230 Rroxscaffold_7G00194870 Rroxscaffold_7G00196310 Rroxscaffold_7G00203910 Rroxscaffold_8G00436890 Rroxscaffold_9G00437900
rosa_rugosa Rorug04G0034000 Rorug04G0049300
rosa_samantha Rh2BG324800 Rh3CG286600 Rh4AG154200 Rh4BG060200 Rh5AG465000
rosa_wichuraiana Rw0G001700 Rw0G002220 Rw0G002610 Rw0G003900 Rw0G005180 Rw0G005190 Rw0G005330 Rw0G010320 Rw0G010460 Rw0G011800 Rw0G012250 Rw0G012750 Rw0G012760 Rw0G012770 Rw0G015330 Rw0G018210 Rw0G020550 Rw0G020700 Rw0G020810 Rw0G021790 Rw0G022660 Rw0G022910 Rw1G008700 Rw1G008870 Rw1G009360 Rw1G009610 Rw1G009750 Rw1G009760 Rw1G009910 Rw1G010630 Rw1G010650 Rw2G022280 Rw2G023370 Rw2G023960 Rw2G025190 Rw2G025550 Rw2G025590 Rw2G025620 Rw2G025720 Rw2G025730 Rw2G025790 Rw2G025810 Rw2G025880 Rw2G026750 Rw2G033860 Rw2G037040 Rw3G025490 Rw3G026360 Rw3G027500 Rw3G027510 Rw3G027820 Rw3G028390 Rw3G028500 Rw3G028640 Rw3G029070 Rw3G029140 Rw3G029220 Rw3G029610 Rw4G002830 Rw4G009210 Rw4G009560 Rw4G010400 Rw4G010860 Rw4G011150 Rw4G011260 Rw4G011700 Rw4G012670 Rw4G018460 Rw4G020770 Rw5G029790 Rw5G029800 Rw5G030040 Rw5G030860 Rw5G030940 Rw5G030950 Rw5G030970 Rw5G031090 Rw5G031230 Rw5G031240 Rw5G031290 Rw5G031330 Rw5G031340 Rw5G031350 Rw5G031360 Rw5G031420 Rw5G031430 Rw5G031470 Rw5G031530 Rw5G045200 Rw5G049340 Rw5G049830 Rw6G001320 Rw6G003070 Rw6G007640 Rw6G011560 Rw6G012460 Rw6G014020 Rw6G014530 Rw6G014590 Rw6G015150 Rw6G015160 Rw6G015200 Rw6G015210 Rw6G015220 Rw6G015270 Rw6G015280 Rw6G015310 Rw6G015330 Rw6G015400 Rw6G016140 Rw6G016410 Rw6G016860 Rw6G028980 Rw6G035110 Rw7G023030 Rw7G024040 Rw7G025740 Rw7G028390 Rw7G028530 Rw7G028600 Rw7G028610 Rw7G028620 Rw7G028630 Rw7G028640 Rw7G028920 Rw7G031450 Rw7G034150 Rw7G038570 Rw7G041520 Rw7G042470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1557
AatII GACGTC 1 cut(s) 1480
Acc36I ACCTGC 1 cut(s) 1846
AccB1I GGYRCC 2 cut(s) 2095, 2146
AccB7I CCANNNNNTGG 3 cut(s) 1887, 2269, 3355
AccI GTMKAC 2 cut(s) 1474, 1700
AccII CGCG 1 cut(s) 3621
AccIII TCCGGA 1 cut(s) 2989
AciI CCGC 6 cut(s) 1754, 1936, 2363, 2651, 3569, 3619
AclWI GGATC 2 cut(s) 1556, 2842
AcoI YGGCCR 2 cut(s) 3220, 3296
AcuI CTGAAG 1 cut(s) 2526
AcvI CACGTG 1 cut(s) 1970
AcyI GRCGYC 1 cut(s) 1477
AdeI CACNNNGTG 2 cut(s) 901, 3544
AfaI GTAC 3 cut(s) 2859, 3012, 3186
AfiI CCNNNNNNNGG 4 cut(s) 711, 1887, 2269, 3355
AflII CTTAAG 1 cut(s) 2807
AflIII ACRYGT 3 cut(s) 1440, 1967, 3732
AgeI ACCGGT 1 cut(s) 1804
AhlI ACTAGT 1 cut(s) 3593
AjnI CCWGG 1 cut(s) 710
AjuI GAANNNNNNNTTGG 4 cut(s) 525, 557, 3383, 3415
AleI CACNNNNGTG 1 cut(s) 1669
Alw21I GWGCWC 3 cut(s) 704, 1166, 1749
Alw26I GTCTC 9 cut(s) 149, 479, 629, 813, 1042, 1790, 2225, 2565, 3678
AlwI GGATC 2 cut(s) 1556, 2842
Ama87I CYCGRG 2 cut(s) 736, 3111
Aor13HI TCCGGA 1 cut(s) 2989
AoxI GGCC 7 cut(s) 251, 296, 377, 2293, 2450, 3220, 3296
ArsI GACNNNNNNTTYG 2 cut(s) 3583, 3615
AseI ATTAAT 2 cut(s) 909, 2588
AsiGI ACCGGT 1 cut(s) 1804
Asp700I GAANNNNTTC 6 cut(s) 263, 891, 1635, 2985, 3102, 3207
AspLEI GCGC 1 cut(s) 3924
AspS9I GGNCC 7 cut(s) 377, 1069, 1822, 1890, 2293, 2450, 3443
AsuC2I CCSGG 4 cut(s) 737, 738, 2407, 3656
AsuII TTCGAA 2 cut(s) 1484, 3614
AvaI CYCGRG 2 cut(s) 736, 3111
AvaII GGWCC 4 cut(s) 1069, 1822, 1890, 3443
BaeI ACNNNNGTAYC 2 cut(s) 672, 705
BalI TGGCCA 2 cut(s) 3222, 3298
BanI GGYRCC 2 cut(s) 2095, 2146
BanII GRGCYC 2 cut(s) 704, 1749
BarI GAAGNNNNNNTAC 2 cut(s) 2850, 2882
BbrPI CACGTG 1 cut(s) 1970
BbsI GAAGAC 1 cut(s) 1956
Bbv12I GWGCWC 3 cut(s) 704, 1166, 1749
BccI CCATC 8 cut(s) 406, 1123, 1325, 1406, 1484, 1950, 3563, 3865
BceAI ACGGC 1 cut(s) 1144
BciT130I CCWGG 1 cut(s) 712
BclI TGATCA 4 cut(s) 651, 1105, 2346, 3535
BcnI CCSGG 4 cut(s) 737, 738, 2407, 3656
BcoDI GTCTC 9 cut(s) 149, 479, 629, 813, 1042, 1790, 2225, 2565, 3678
BcuI ACTAGT 1 cut(s) 3593
BfaI CTAG 7 cut(s) 83, 174, 591, 1143, 1470, 1742, 3594
BfmI CTRYAG 2 cut(s) 801, 1299
BfrI CTTAAG 1 cut(s) 2807
BfuAI ACCTGC 1 cut(s) 1846
BlpI GCTNAGC 1 cut(s) 2691
Bme1390I CCNGG 5 cut(s) 712, 737, 738, 2407, 3656
Bme18I GGWCC 4 cut(s) 1069, 1822, 1890, 3443
BmeT110I CYCGRG 2 cut(s) 736, 3111
BmgT120I GGNCC 7 cut(s) 377, 1069, 1822, 1890, 2293, 2450, 3443
BmiI GGNNCC 6 cut(s) 1071, 1676, 2097, 2148, 2773, 3444
BmrFI CCNGG 5 cut(s) 712, 737, 738, 2407, 3656
BpiI GAAGAC 1 cut(s) 1956
BplI GAGNNNNNCTC 6 cut(s) 112, 144, 686, 718, 1039, 1071
BpmI CTGGAG 2 cut(s) 830, 2547
Bpu1102I GCTNAGC 1 cut(s) 2691
Bpu14I TTCGAA 2 cut(s) 1484, 3614
BpuEI CTTGAG 4 cut(s) 498, 1589, 2510, 2528
BpuMI CCSGG 4 cut(s) 737, 738, 2407, 3656
Bsa29I ATCGAT 1 cut(s) 1231
BsaAI YACGTR 2 cut(s) 1970, 3014
BsaHI GRCGYC 1 cut(s) 1477
BsaI GGTCTC 3 cut(s) 479, 2225, 3678
BsaJI CCNNGG 6 cut(s) 611, 736, 2395, 2775, 2840, 3026
BsaWI WCCGGW 3 cut(s) 1804, 2190, 2989
BsaXI ACNNNNNCTCC 2 cut(s) 2530, 2560
Bsc4I CCNNNNNNNGG 4 cut(s) 711, 1887, 2269, 3355
Bse118I RCCGGY 1 cut(s) 1804
Bse1I ACTGG 3 cut(s) 754, 779, 2084
Bse3DI GCAATG 2 cut(s) 1893, 3854
BseAI TCCGGA 1 cut(s) 2989
BseBI CCWGG 1 cut(s) 712
BseCI ATCGAT 1 cut(s) 1231
BseDI CCNNGG 6 cut(s) 611, 736, 2395, 2775, 2840, 3026
BseGI GGATG 8 cut(s) 301, 1417, 1843, 1938, 2482, 2998, 3139, 3319
BseLI CCNNNNNNNGG 4 cut(s) 711, 1887, 2269, 3355
BseMI GCAATG 2 cut(s) 1893, 3854
BseMII CTCAG 4 cut(s) 476, 867, 2705, 3689
BseNI ACTGG 3 cut(s) 754, 779, 2084
BseRI GAGGAG 5 cut(s) 63, 120, 676, 2525, 3012
BsgI GTGCAG 3 cut(s) 356, 923, 1053
Bsh1236I CGCG 1 cut(s) 3621
Bsh1285I CGRYCG 1 cut(s) 1247
BshFI GGCC 7 cut(s) 253, 298, 379, 2295, 2452, 3222, 3298
BshNI GGYRCC 2 cut(s) 2095, 2146
BshTI ACCGGT 1 cut(s) 1804
BshVI ATCGAT 1 cut(s) 1231
BsiEI CGRYCG 1 cut(s) 1247
BsiHKAI GWGCWC 3 cut(s) 704, 1166, 1749
BsiHKCI CYCGRG 2 cut(s) 736, 3111
BsiSI CCGG 6 cut(s) 737, 1805, 2191, 2406, 2990, 3656
BslFI GGGAC 2 cut(s) 1380, 3456
BslI CCNNNNNNNGG 4 cut(s) 711, 1887, 2269, 3355
BsmAI GTCTC 9 cut(s) 149, 479, 629, 813, 1042, 1790, 2225, 2565, 3678
BsmFI GGGAC 2 cut(s) 1380, 3456
BsmI GAATGC 4 cut(s) 1373, 2513, 3207, 3907
BsnI GGCC 7 cut(s) 253, 298, 379, 2295, 2452, 3222, 3298
Bso31I GGTCTC 3 cut(s) 479, 2225, 3678
BsoBI CYCGRG 2 cut(s) 736, 3111
Bsp119I TTCGAA 2 cut(s) 1484, 3614
Bsp1286I GDGCHC 3 cut(s) 704, 1166, 1749
Bsp13I TCCGGA 1 cut(s) 2989
Bsp143I GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
Bsp1720I GCTNAGC 1 cut(s) 2691
BspACI CCGC 6 cut(s) 1754, 1936, 2363, 2651, 3569, 3619
BspANI GGCC 7 cut(s) 253, 298, 379, 2295, 2452, 3222, 3298
BspCNI CTCAG 4 cut(s) 475, 868, 2704, 3688
BspDI ATCGAT 1 cut(s) 1231
BspEI TCCGGA 1 cut(s) 2989
BspFNI CGCG 1 cut(s) 3621
BspHI TCATGA 2 cut(s) 1531, 3937
BspLI GGNNCC 6 cut(s) 1071, 1676, 2097, 2148, 2773, 3444
BspMAI CTGCAG 2 cut(s) 805, 1303
BspMI ACCTGC 1 cut(s) 1846
BspPI GGATC 2 cut(s) 1556, 2842
BspQI GCTCTTC 5 cut(s) 81, 113, 692, 3337, 3844
BspT104I TTCGAA 2 cut(s) 1484, 3614
BspT107I GGYRCC 2 cut(s) 2095, 2146
BspTI CTTAAG 1 cut(s) 2807
BspTNI GGTCTC 3 cut(s) 479, 2225, 3678
BsrDI GCAATG 2 cut(s) 1893, 3854
BsrFI RCCGGY 1 cut(s) 1804
BsrI ACTGG 3 cut(s) 754, 779, 2084
BssAI RCCGGY 1 cut(s) 1804
BssECI CCNNGG 6 cut(s) 611, 736, 2395, 2775, 2840, 3026
BssMI GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
BssNI GRCGYC 1 cut(s) 1477
BssT1I CCWWGG 4 cut(s) 2395, 2775, 2840, 3026
Bst2UI CCWGG 1 cut(s) 712
Bst4CI ACNGT 6 cut(s) 18, 727, 2119, 2374, 2580, 3649
Bst6I CTCTTC 7 cut(s) 81, 113, 692, 1017, 1827, 3337, 3844
BstACI GRCGYC 1 cut(s) 1477
BstAFI CTTAAG 1 cut(s) 2807
BstAPI GCANNNNNTGC 2 cut(s) 2477, 2618
BstBAI YACGTR 2 cut(s) 1970, 3014
BstBI TTCGAA 2 cut(s) 1484, 3614
BstC8I GCNNGC 7 cut(s) 1122, 1299, 1731, 2016, 2655, 2727, 3086
BstDEI CTNAG 7 cut(s) 462, 525, 876, 2100, 2691, 3060, 3675
BstF5I GGATG 8 cut(s) 301, 1417, 1843, 1938, 2482, 2998, 3139, 3319
BstFNI CGCG 1 cut(s) 3621
BstHHI GCGC 1 cut(s) 3924
BstKTI GATC 9 cut(s) 654, 1108, 1231, 1564, 2349, 2850, 3166, 3343, 3538
BstMAI GTCTC 9 cut(s) 149, 479, 629, 813, 1042, 1790, 2225, 2565, 3678
BstMBI GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
BstMCI CGRYCG 1 cut(s) 1247
BstMWI GCNNNNNNNGC 8 cut(s) 88, 850, 1379, 1753, 2477, 2618, 3698, 3803
BstNI CCWGG 1 cut(s) 712
BstNSI RCATGY 5 cut(s) 1373, 1444, 2505, 2657, 3736
BstSCI CCNGG 5 cut(s) 710, 735, 736, 2405, 3654
BstSFI CTRYAG 2 cut(s) 801, 1299
BstUI CGCG 1 cut(s) 3621
BstV2I GAAGAC 1 cut(s) 1956
BstX2I RGATCY 1 cut(s) 1561
BstXI CCANNNNNNTGG 2 cut(s) 1671, 3078
BstYI RGATCY 1 cut(s) 1561
Bsu15I ATCGAT 1 cut(s) 1231
BsuRI GGCC 7 cut(s) 253, 298, 379, 2295, 2452, 3222, 3298
BsuTUI ATCGAT 1 cut(s) 1231
BtsCI GGATG 8 cut(s) 301, 1417, 1843, 1938, 2482, 2998, 3139, 3319
BtsI GCAGTG 3 cut(s) 1041, 2210, 2619
BtsIMutI CAGTG 6 cut(s) 786, 1041, 1452, 2210, 2619, 2790
BveI ACCTGC 1 cut(s) 1846
Cac8I GCNNGC 7 cut(s) 1122, 1299, 1731, 2016, 2655, 2727, 3086
CciI TCATGA 2 cut(s) 1531, 3937
CfoI GCGC 1 cut(s) 3924
Cfr10I RCCGGY 1 cut(s) 1804
Cfr13I GGNCC 7 cut(s) 377, 1069, 1822, 1890, 2293, 2450, 3443
Cfr9I CCCGGG 1 cut(s) 736
ClaI ATCGAT 1 cut(s) 1231
Csp6I GTAC 3 cut(s) 2858, 3011, 3185
CspAI ACCGGT 1 cut(s) 1804
CviQI GTAC 3 cut(s) 2858, 3011, 3185
DdeI CTNAG 7 cut(s) 462, 525, 876, 2100, 2691, 3060, 3675
DpnI GATC 9 cut(s) 653, 1107, 1230, 1563, 2348, 2849, 3165, 3342, 3537
DpnII GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
DraIII CACNNNGTG 2 cut(s) 901, 3544
EaeI YGGCCR 2 cut(s) 3220, 3296
Eam1104I CTCTTC 7 cut(s) 81, 113, 692, 1017, 1827, 3337, 3844
EarI CTCTTC 7 cut(s) 81, 113, 692, 1017, 1827, 3337, 3844
EciI GGCGGA 1 cut(s) 2352
Ecl136II GAGCTC 2 cut(s) 702, 1747
Eco130I CCWWGG 4 cut(s) 2395, 2775, 2840, 3026
Eco24I GRGCYC 2 cut(s) 704, 1749
Eco31I GGTCTC 3 cut(s) 479, 2225, 3678
Eco47I GGWCC 4 cut(s) 1069, 1822, 1890, 3443
Eco53kI GAGCTC 2 cut(s) 702, 1747
Eco57I CTGAAG 1 cut(s) 2526
Eco72I CACGTG 1 cut(s) 1970
Eco88I CYCGRG 2 cut(s) 736, 3111
EcoICRI GAGCTC 2 cut(s) 702, 1747
EcoO109I RGGNCCY 2 cut(s) 1069, 3443
EcoRI GAATTC 1 cut(s) 1549
EcoRII CCWGG 1 cut(s) 710
EcoT14I CCWWGG 4 cut(s) 2395, 2775, 2840, 3026
EcoT22I ATGCAT 2 cut(s) 34, 1375
EcoT38I GRGCYC 2 cut(s) 704, 1749
ErhI CCWWGG 4 cut(s) 2395, 2775, 2840, 3026
FalI AAGNNNNNCTT 6 cut(s) 1551, 1583, 2490, 2522, 2709, 2741
FaqI GGGAC 2 cut(s) 1380, 3456
FbaI TGATCA 4 cut(s) 651, 1105, 2346, 3535
FblI GTMKAC 2 cut(s) 1474, 1700
FokI GGATG 8 cut(s) 288, 1424, 1850, 1925, 2489, 3005, 3146, 3326
FriOI GRGCYC 2 cut(s) 704, 1749
FspBI CTAG 7 cut(s) 83, 174, 591, 1143, 1470, 1742, 3594
GlaI GCGC 1 cut(s) 3923
GsuI CTGGAG 2 cut(s) 830, 2547
HaeIII GGCC 7 cut(s) 253, 298, 379, 2295, 2452, 3222, 3298
HapII CCGG 6 cut(s) 737, 1805, 2191, 2406, 2990, 3656
HhaI GCGC 1 cut(s) 3924
Hin1I GRCGYC 1 cut(s) 1477
Hin6I GCGC 1 cut(s) 3922
HinP1I GCGC 1 cut(s) 3922
HincII GTYRAC 3 cut(s) 1150, 1475, 2326
HindII GTYRAC 3 cut(s) 1150, 1475, 2326
HindIII AAGCTT 6 cut(s) 195, 1078, 1184, 1536, 1634, 2030
HpaII CCGG 6 cut(s) 737, 1805, 2191, 2406, 2990, 3656
Hpy99I CGWCG 1 cut(s) 1479
HpyCH4III ACNGT 6 cut(s) 18, 727, 2119, 2374, 2580, 3649
HpyCH4IV ACGT 4 cut(s) 1477, 1969, 3013, 3373
HpyF10VI GCNNNNNNNGC 8 cut(s) 88, 850, 1379, 1753, 2477, 2618, 3698, 3803
HpyF3I CTNAG 7 cut(s) 462, 525, 876, 2100, 2691, 3060, 3675
HpySE526I ACGT 4 cut(s) 1477, 1969, 3013, 3373
Hsp92I GRCGYC 1 cut(s) 1477
HspAI GCGC 1 cut(s) 3922
Kpn2I TCCGGA 1 cut(s) 2989
Ksp22I TGATCA 4 cut(s) 651, 1105, 2346, 3535
Kzo9I GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
LguI GCTCTTC 5 cut(s) 81, 113, 692, 3337, 3844
LmnI GCTCC 5 cut(s) 707, 849, 2551, 3081, 3919
MaeI CTAG 7 cut(s) 83, 174, 591, 1143, 1470, 1742, 3594
MaeII ACGT 4 cut(s) 1477, 1969, 3013, 3373
MaeIII GTNAC 7 cut(s) 781, 866, 1190, 1436, 2158, 3014, 3374
MalI GATC 9 cut(s) 653, 1107, 1230, 1563, 2348, 2849, 3165, 3342, 3537
MboI GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
MfeI CAATTG 1 cut(s) 2999
MflI RGATCY 1 cut(s) 1561
MhlI GDGCHC 3 cut(s) 704, 1166, 1749
MlsI TGGCCA 2 cut(s) 3222, 3298
MluNI TGGCCA 2 cut(s) 3222, 3298
MlyI GAGTC 6 cut(s) 815, 1044, 1694, 2089, 3011, 3899
MmeI TCCRAC 6 cut(s) 272, 510, 1608, 2023, 2150, 3765
Mox20I TGGCCA 2 cut(s) 3222, 3298
Mph1103I ATGCAT 2 cut(s) 34, 1375
MroI TCCGGA 1 cut(s) 2989
MroXI GAANNNNTTC 6 cut(s) 263, 891, 1635, 2985, 3102, 3207
MscI TGGCCA 2 cut(s) 3222, 3298
MslI CAYNNNNRTG 5 cut(s) 216, 1445, 1669, 3228, 3479
Msp20I TGGCCA 2 cut(s) 3222, 3298
MspA1I CMGCKG 3 cut(s) 1756, 3839, 3862
MspCI CTTAAG 1 cut(s) 2807
MspI CCGG 6 cut(s) 737, 1805, 2191, 2406, 2990, 3656
MspR9I CCNGG 5 cut(s) 712, 737, 738, 2407, 3656
MunI CAATTG 1 cut(s) 2999
Mva1269I GAATGC 4 cut(s) 1373, 2513, 3207, 3907
MvaI CCWGG 1 cut(s) 712
MvnI CGCG 1 cut(s) 3621
MwoI GCNNNNNNNGC 8 cut(s) 88, 850, 1379, 1753, 2477, 2618, 3698, 3803
NciI CCSGG 4 cut(s) 737, 738, 2407, 3656
NdeII GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
NlaIV GGNNCC 6 cut(s) 1071, 1676, 2097, 2148, 2773, 3444
NmuCI GTSAC 7 cut(s) 781, 866, 1190, 1436, 2158, 3014, 3374
NsiI ATGCAT 2 cut(s) 34, 1375
NspI RCATGY 5 cut(s) 1373, 1444, 2505, 2657, 3736
NspV TTCGAA 2 cut(s) 1484, 3614
OliI CACNNNNGTG 1 cut(s) 1669
PaeI GCATGC 1 cut(s) 2657
PaeR7I CTCGAG 1 cut(s) 3111
PagI TCATGA 2 cut(s) 1531, 3937
PciI ACATGT 2 cut(s) 1440, 3732
PciSI GCTCTTC 5 cut(s) 81, 113, 692, 3337, 3844
PcsI WCGNNNNNNNCGW 2 cut(s) 3118, 3349
PctI GAATGC 4 cut(s) 1373, 2513, 3207, 3907
PdmI GAANNNNTTC 6 cut(s) 263, 891, 1635, 2985, 3102, 3207
PfeI GAWTC 4 cut(s) 307, 990, 1039, 1990
PflFI GACNNNGTC 2 cut(s) 1307, 3944
PflMI CCANNNNNTGG 3 cut(s) 1887, 2269, 3355
PinAI ACCGGT 1 cut(s) 1804
PleI GAGTC 6 cut(s) 814, 1044, 1693, 2088, 3011, 3898
PmaCI CACGTG 1 cut(s) 1970
PmlI CACGTG 1 cut(s) 1970
PpsI GAGTC 6 cut(s) 814, 1044, 1693, 2088, 3011, 3898
Ppu21I YACGTR 2 cut(s) 1970, 3014
PpuMI RGGWCCY 2 cut(s) 1069, 3443
PscI ACATGT 2 cut(s) 1440, 3732
PshBI ATTAAT 2 cut(s) 909, 2588
PsiI TTATAA 1 cut(s) 1557
Psp124BI GAGCTC 2 cut(s) 704, 1749
Psp5II RGGWCCY 2 cut(s) 1069, 3443
Psp6I CCWGG 1 cut(s) 710
PspCI CACGTG 1 cut(s) 1970
PspGI CCWGG 1 cut(s) 710
PspN4I GGNNCC 6 cut(s) 1071, 1676, 2097, 2148, 2773, 3444
PspPI GGNCC 7 cut(s) 377, 1069, 1822, 1890, 2293, 2450, 3443
PspPPI RGGWCCY 2 cut(s) 1069, 3443
PstI CTGCAG 2 cut(s) 805, 1303
PsuI RGATCY 1 cut(s) 1561
PsyI GACNNNGTC 2 cut(s) 1307, 3944
PvuII CAGCTG 2 cut(s) 3839, 3862
RsaI GTAC 3 cut(s) 2859, 3012, 3186
RsaNI GTAC 3 cut(s) 2858, 3011, 3185
RseI CAYNNNNRTG 5 cut(s) 216, 1445, 1669, 3228, 3479
SacI GAGCTC 2 cut(s) 704, 1749
SalI GTCGAC 1 cut(s) 1473
SapI GCTCTTC 5 cut(s) 81, 113, 692, 3337, 3844
Sau3AI GATC 9 cut(s) 651, 1105, 1228, 1561, 2346, 2847, 3163, 3340, 3535
Sau96I GGNCC 7 cut(s) 377, 1069, 1822, 1890, 2293, 2450, 3443
SchI GAGTC 6 cut(s) 815, 1044, 1694, 2089, 3011, 3899
ScrFI CCNGG 5 cut(s) 712, 737, 738, 2407, 3656
SduI GDGCHC 3 cut(s) 704, 1166, 1749
SfcI CTRYAG 2 cut(s) 801, 1299
Sfr274I CTCGAG 1 cut(s) 3111
SfuI TTCGAA 2 cut(s) 1484, 3614
SinI GGWCC 4 cut(s) 1069, 1822, 1890, 3443
SlaI CTCGAG 1 cut(s) 3111
SmaI CCCGGG 1 cut(s) 738
SmiMI CAYNNNNRTG 5 cut(s) 216, 1445, 1669, 3228, 3479
SmlI CTYRAG 6 cut(s) 513, 1568, 2507, 2525, 2807, 3111
SmoI CTYRAG 6 cut(s) 513, 1568, 2507, 2525, 2807, 3111
SpeI ACTAGT 1 cut(s) 3593
SphI GCATGC 1 cut(s) 2657
SsiI CCGC 6 cut(s) 1754, 1936, 2363, 2651, 3569, 3619
SspI AATATT 3 cut(s) 913, 3397, 3634
SspMI CTAG 7 cut(s) 83, 174, 591, 1143, 1470, 1742, 3594
SstI GAGCTC 2 cut(s) 704, 1749
StyD4I CCNGG 5 cut(s) 710, 735, 736, 2405, 3654
StyI CCWWGG 4 cut(s) 2395, 2775, 2840, 3026
TaaI ACNGT 6 cut(s) 18, 727, 2119, 2374, 2580, 3649
TaiI ACGT 4 cut(s) 1480, 1972, 3016, 3376
TaqI TCGA 7 cut(s) 405, 1231, 1474, 1484, 3112, 3214, 3614
TaqII GACCGA 1 cut(s) 1261
TauI GCSGC 1 cut(s) 3572
TfiI GAWTC 4 cut(s) 307, 990, 1039, 1990
TscAI CASTG 6 cut(s) 786, 1041, 1452, 2217, 2619, 2797
TseFI GTSAC 7 cut(s) 781, 866, 1190, 1436, 2158, 3014, 3374
Tsp45I GTSAC 7 cut(s) 781, 866, 1190, 1436, 2158, 3014, 3374
TspMI CCCGGG 1 cut(s) 736
TspRI CASTG 6 cut(s) 786, 1041, 1452, 2217, 2619, 2797
Tth111I GACNNNGTC 2 cut(s) 1307, 3944
Van91I CCANNNNNTGG 3 cut(s) 1887, 2269, 3355
Vha464I CTTAAG 1 cut(s) 2807
VpaK11BI GGWCC 4 cut(s) 1069, 1822, 1890, 3443
VspI ATTAAT 2 cut(s) 909, 2588
XceI RCATGY 5 cut(s) 1373, 1444, 2505, 2657, 3736
XhoI CTCGAG 1 cut(s) 3111
XmaI CCCGGG 1 cut(s) 736
XmiI GTMKAC 2 cut(s) 1474, 1700
XmnI GAANNNNTTC 6 cut(s) 263, 891, 1635, 2985, 3102, 3207
XspI CTAG 7 cut(s) 83, 174, 591, 1143, 1470, 1742, 3594
ZraI GACGTC 1 cut(s) 1478
Zsp2I ATGCAT 2 cut(s) 34, 1375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.