transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 323 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 164 |
| Acc36I | ACCTGC | 1 cut(s) | 142 |
| AccB1I | GGYRCC | 1 cut(s) | 631 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 786 |
| AccIII | TCCGGA | 1 cut(s) | 121 |
| AciI | CCGC | 1 cut(s) | 851 |
| AclWI | GGATC | 2 cut(s) | 745, 845 |
| AcsI | RAATTY | 1 cut(s) | 502 |
| AfaI | GTAC | 2 cut(s) | 612, 770 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 493, 786 |
| AflIII | ACRYGT | 1 cut(s) | 80 |
| AgsI | TTSAA | 8 cut(s) | 74, 95, 194, 331, 419, 467, 670, 889 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 400 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 459, 491 |
| AluBI | AGCT | 6 cut(s) | 70, 101, 327, 724, 748, 797 |
| AluI | AGCT | 6 cut(s) | 70, 101, 327, 724, 748, 797 |
| AlwI | GGATC | 2 cut(s) | 745, 845 |
| Aor13HI | TCCGGA | 1 cut(s) | 121 |
| AoxI | GGCC | 3 cut(s) | 241, 245, 495 |
| ApeKI | GCWGC | 3 cut(s) | 406, 527, 530 |
| ApoI | RAATTY | 1 cut(s) | 502 |
| AspS9I | GGNCC | 2 cut(s) | 495, 922 |
| AsuC2I | CCSGG | 2 cut(s) | 173, 983 |
| AsuHPI | GGTGA | 3 cut(s) | 77, 289, 988 |
| AvaII | GGWCC | 1 cut(s) | 922 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 69, 102 |
| BanI | GGYRCC | 1 cut(s) | 631 |
| BanII | GRGCYC | 1 cut(s) | 983 |
| BbsI | GAAGAC | 1 cut(s) | 160 |
| BbvI | GCAGC | 3 cut(s) | 418, 539, 542 |
| BccI | CCATC | 2 cut(s) | 305, 895 |
| BceAI | ACGGC | 1 cut(s) | 482 |
| BciVI | GTATCC | 1 cut(s) | 363 |
| BcnI | CCSGG | 2 cut(s) | 173, 983 |
| BfaI | CTAG | 3 cut(s) | 62, 239, 867 |
| BfuAI | ACCTGC | 1 cut(s) | 142 |
| BfuI | GTATCC | 1 cut(s) | 363 |
| BglII | AGATCT | 1 cut(s) | 58 |
| BisI | GCNGC | 3 cut(s) | 407, 528, 531 |
| BlsI | GCNGC | 3 cut(s) | 408, 529, 532 |
| Bme1390I | CCNGG | 2 cut(s) | 173, 983 |
| Bme18I | GGWCC | 1 cut(s) | 922 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 400 |
| BmgT120I | GGNCC | 2 cut(s) | 495, 922 |
| BmiI | GGNNCC | 1 cut(s) | 633 |
| BmrFI | CCNGG | 2 cut(s) | 173, 983 |
| BmsI | GCATC | 6 cut(s) | 26, 59, 331, 424, 542, 844 |
| BpiI | GAAGAC | 1 cut(s) | 160 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 247, 279 |
| Bpu10I | CCTNAGC | 1 cut(s) | 660 |
| BpuEI | CTTGAG | 1 cut(s) | 537 |
| BpuMI | CCSGG | 2 cut(s) | 173, 983 |
| BsaJI | CCNNGG | 1 cut(s) | 300 |
| BsaWI | WCCGGW | 1 cut(s) | 121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 459, 489 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 493, 786 |
| Bse118I | RCCGGY | 1 cut(s) | 243 |
| Bse3DI | GCAATG | 3 cut(s) | 351, 450, 698 |
| BseAI | TCCGGA | 1 cut(s) | 121 |
| BseDI | CCNNGG | 1 cut(s) | 300 |
| BseGI | GGATG | 2 cut(s) | 439, 859 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 493, 786 |
| BseMI | GCAATG | 3 cut(s) | 351, 450, 698 |
| BseMII | CTCAG | 1 cut(s) | 975 |
| BseXI | GCAGC | 3 cut(s) | 418, 539, 542 |
| BseYI | CCCAGC | 1 cut(s) | 817 |
| BsgI | GTGCAG | 1 cut(s) | 170 |
| BshFI | GGCC | 3 cut(s) | 243, 247, 497 |
| BshNI | GGYRCC | 1 cut(s) | 631 |
| BsiSI | CCGG | 4 cut(s) | 122, 173, 244, 983 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 493, 786 |
| BsnI | GGCC | 3 cut(s) | 243, 247, 497 |
| Bsp1286I | GDGCHC | 1 cut(s) | 983 |
| Bsp13I | TCCGGA | 1 cut(s) | 121 |
| Bsp143I | GATC | 3 cut(s) | 58, 750, 837 |
| Bsp19I | CCATGG | 1 cut(s) | 300 |
| BspACI | CCGC | 1 cut(s) | 851 |
| BspANI | GGCC | 3 cut(s) | 243, 247, 497 |
| BspCNI | CTCAG | 1 cut(s) | 974 |
| BspEI | TCCGGA | 1 cut(s) | 121 |
| BspHI | TCATGA | 2 cut(s) | 252, 897 |
| BspLI | GGNNCC | 1 cut(s) | 633 |
| BspMI | ACCTGC | 1 cut(s) | 142 |
| BspPI | GGATC | 2 cut(s) | 745, 845 |
| BspT107I | GGYRCC | 1 cut(s) | 631 |
| BsrDI | GCAATG | 3 cut(s) | 351, 450, 698 |
| BsrFI | RCCGGY | 1 cut(s) | 243 |
| BssAI | RCCGGY | 1 cut(s) | 243 |
| BssECI | CCNNGG | 1 cut(s) | 300 |
| BssMI | GATC | 3 cut(s) | 58, 750, 837 |
| BssT1I | CCWWGG | 1 cut(s) | 300 |
| Bst4CI | ACNGT | 3 cut(s) | 107, 161, 448 |
| Bst6I | CTCTTC | 1 cut(s) | 594 |
| BstC8I | GCNNGC | 3 cut(s) | 245, 265, 830 |
| BstDEI | CTNAG | 4 cut(s) | 489, 660, 761, 961 |
| BstDSI | CCRYGG | 1 cut(s) | 300 |
| BstF5I | GGATG | 2 cut(s) | 439, 859 |
| BstKTI | GATC | 3 cut(s) | 61, 753, 840 |
| BstMBI | GATC | 3 cut(s) | 58, 750, 837 |
| BstNSI | RCATGY | 3 cut(s) | 84, 828, 832 |
| BstSCI | CCNGG | 2 cut(s) | 171, 981 |
| BstV1I | GCAGC | 3 cut(s) | 418, 539, 542 |
| BstV2I | GAAGAC | 1 cut(s) | 160 |
| BstX2I | RGATCY | 2 cut(s) | 58, 837 |
| BstYI | RGATCY | 2 cut(s) | 58, 837 |
| BsuI | GTATCC | 1 cut(s) | 363 |
| BsuRI | GGCC | 3 cut(s) | 243, 247, 497 |
| BtgI | CCRYGG | 1 cut(s) | 300 |
| BtsCI | GGATG | 2 cut(s) | 439, 859 |
| BveI | ACCTGC | 1 cut(s) | 142 |
| Cac8I | GCNNGC | 3 cut(s) | 245, 265, 830 |
| CciI | TCATGA | 2 cut(s) | 252, 897 |
| Cfr10I | RCCGGY | 1 cut(s) | 243 |
| Cfr13I | GGNCC | 2 cut(s) | 495, 922 |
| CseI | GACGC | 1 cut(s) | 521 |
| Csp6I | GTAC | 2 cut(s) | 611, 769 |
| CviQI | GTAC | 2 cut(s) | 611, 769 |
| DdeI | CTNAG | 4 cut(s) | 489, 660, 761, 961 |
| DpnI | GATC | 3 cut(s) | 60, 752, 839 |
| DpnII | GATC | 3 cut(s) | 58, 750, 837 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 164 |
| DriI | GACNNNNNGTC | 1 cut(s) | 400 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 164 |
| Eam1104I | CTCTTC | 1 cut(s) | 594 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 400 |
| EarI | CTCTTC | 1 cut(s) | 594 |
| EciI | GGCGGA | 1 cut(s) | 866 |
| Eco130I | CCWWGG | 1 cut(s) | 300 |
| Eco24I | GRGCYC | 1 cut(s) | 983 |
| Eco47I | GGWCC | 1 cut(s) | 922 |
| EcoO109I | RGGNCCY | 1 cut(s) | 922 |
| EcoT14I | CCWWGG | 1 cut(s) | 300 |
| EcoT22I | ATGCAT | 4 cut(s) | 52, 439, 830, 834 |
| EcoT38I | GRGCYC | 1 cut(s) | 983 |
| ErhI | CCWWGG | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 3 cut(s) | 407, 528, 531 |
| FokI | GGATG | 2 cut(s) | 446, 866 |
| FriOI | GRGCYC | 1 cut(s) | 983 |
| FseI | GGCCGGCC | 1 cut(s) | 247 |
| Fsp4HI | GCNGC | 3 cut(s) | 407, 528, 531 |
| FspBI | CTAG | 3 cut(s) | 62, 239, 867 |
| GluI | GCNGC | 3 cut(s) | 407, 528, 531 |
| GsaI | CCCAGC | 1 cut(s) | 821 |
| HaeIII | GGCC | 3 cut(s) | 243, 247, 497 |
| HapII | CCGG | 4 cut(s) | 122, 173, 244, 983 |
| HgaI | GACGC | 1 cut(s) | 521 |
| HincII | GTYRAC | 1 cut(s) | 157 |
| HindII | GTYRAC | 1 cut(s) | 157 |
| HindIII | AAGCTT | 1 cut(s) | 325 |
| HinfI | GANTC | 3 cut(s) | 542, 625, 872 |
| HpaII | CCGG | 4 cut(s) | 122, 173, 244, 983 |
| HphI | GGTGA | 3 cut(s) | 77, 289, 988 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 1 cut(s) | 964 |
| Hpy188III | TCNNGA | 3 cut(s) | 122, 253, 898 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| Hpy99I | CGWCG | 1 cut(s) | 885 |
| HpyAV | CCTTC | 4 cut(s) | 119, 228, 421, 627 |
| HpyCH4III | ACNGT | 3 cut(s) | 107, 161, 448 |
| HpyCH4IV | ACGT | 1 cut(s) | 880 |
| HpyCH4V | TGCA | 9 cut(s) | 17, 50, 151, 344, 437, 828, 832, 857, 988 |
| HpyF3I | CTNAG | 4 cut(s) | 489, 660, 761, 961 |
| HpySE526I | ACGT | 1 cut(s) | 880 |
| Kpn2I | TCCGGA | 1 cut(s) | 121 |
| KroI | GCCGGC | 1 cut(s) | 243 |
| KroNI | GCCGGC | 1 cut(s) | 245 |
| Kzo9I | GATC | 3 cut(s) | 58, 750, 837 |
| LmnI | GCTCC | 1 cut(s) | 789 |
| LpnPI | CCDG | 7 cut(s) | 135, 137, 186, 257, 614, 831, 996 |
| Lsp1109I | GCAGC | 3 cut(s) | 418, 539, 542 |
| LweI | GCATC | 6 cut(s) | 26, 59, 331, 424, 542, 844 |
| MaeI | CTAG | 3 cut(s) | 62, 239, 867 |
| MaeII | ACGT | 1 cut(s) | 880 |
| MaeIII | GTNAC | 1 cut(s) | 873 |
| MalI | GATC | 3 cut(s) | 60, 752, 839 |
| MboI | GATC | 3 cut(s) | 58, 750, 837 |
| MboII | GAAGA | 6 cut(s) | 86, 149, 160, 212, 581, 752 |
| MfeI | CAATTG | 2 cut(s) | 462, 732 |
| MflI | RGATCY | 2 cut(s) | 58, 837 |
| MhlI | GDGCHC | 1 cut(s) | 983 |
| MluCI | AATT | 8 cut(s) | 95, 273, 318, 410, 462, 502, 638, 732 |
| MlyI | GAGTC | 2 cut(s) | 551, 881 |
| MmeI | TCCRAC | 1 cut(s) | 767 |
| Mph1103I | ATGCAT | 4 cut(s) | 52, 439, 830, 834 |
| MroI | TCCGGA | 1 cut(s) | 121 |
| MroNI | GCCGGC | 1 cut(s) | 243 |
| MseI | TTAA | 1 cut(s) | 927 |
| MslI | CAYNNNNRTG | 2 cut(s) | 827, 896 |
| MspI | CCGG | 4 cut(s) | 122, 173, 244, 983 |
| MspR9I | CCNGG | 2 cut(s) | 173, 983 |
| MunI | CAATTG | 2 cut(s) | 462, 732 |
| NaeI | GCCGGC | 1 cut(s) | 245 |
| NciI | CCSGG | 2 cut(s) | 173, 983 |
| NcoI | CCATGG | 1 cut(s) | 300 |
| NdeII | GATC | 3 cut(s) | 58, 750, 837 |
| NgoMIV | GCCGGC | 1 cut(s) | 243 |
| NlaIV | GGNNCC | 1 cut(s) | 633 |
| NmuCI | GTSAC | 1 cut(s) | 873 |
| NsiI | ATGCAT | 4 cut(s) | 52, 439, 830, 834 |
| NspI | RCATGY | 3 cut(s) | 84, 828, 832 |
| PaeI | GCATGC | 1 cut(s) | 832 |
| PagI | TCATGA | 2 cut(s) | 252, 897 |
| PciI | ACATGT | 1 cut(s) | 80 |
| PdiI | GCCGGC | 1 cut(s) | 245 |
| PfeI | GAWTC | 1 cut(s) | 625 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 786 |
| PkrI | GCNGC | 3 cut(s) | 408, 529, 532 |
| PleI | GAGTC | 2 cut(s) | 550, 880 |
| PpsI | GAGTC | 2 cut(s) | 550, 880 |
| PpuMI | RGGWCCY | 1 cut(s) | 922 |
| PscI | ACATGT | 1 cut(s) | 80 |
| PsiI | TTATAA | 1 cut(s) | 323 |
| Psp5II | RGGWCCY | 1 cut(s) | 922 |
| PspFI | CCCAGC | 1 cut(s) | 817 |
| PspN4I | GGNNCC | 1 cut(s) | 633 |
| PspPI | GGNCC | 2 cut(s) | 495, 922 |
| PspPPI | RGGWCCY | 1 cut(s) | 922 |
| PsuI | RGATCY | 2 cut(s) | 58, 837 |
| RigI | GGCCGGCC | 1 cut(s) | 247 |
| RsaI | GTAC | 2 cut(s) | 612, 770 |
| RsaNI | GTAC | 2 cut(s) | 611, 769 |
| RseI | CAYNNNNRTG | 2 cut(s) | 827, 896 |
| SaqAI | TTAA | 1 cut(s) | 927 |
| SatI | GCNGC | 3 cut(s) | 407, 528, 531 |
| Sau3AI | GATC | 3 cut(s) | 58, 750, 837 |
| Sau96I | GGNCC | 2 cut(s) | 495, 922 |
| SchI | GAGTC | 2 cut(s) | 551, 881 |
| ScrFI | CCNGG | 2 cut(s) | 173, 983 |
| SduI | GDGCHC | 1 cut(s) | 983 |
| SfaNI | GCATC | 6 cut(s) | 26, 59, 331, 424, 542, 844 |
| SinI | GGWCC | 1 cut(s) | 922 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 827, 896 |
| SmlI | CTYRAG | 1 cut(s) | 552 |
| SmoI | CTYRAG | 1 cut(s) | 552 |
| SphI | GCATGC | 1 cut(s) | 832 |
| Sse9I | AATT | 8 cut(s) | 95, 273, 318, 410, 462, 502, 638, 732 |
| SsiI | CCGC | 1 cut(s) | 851 |
| SspMI | CTAG | 3 cut(s) | 62, 239, 867 |
| StyD4I | CCNGG | 2 cut(s) | 171, 981 |
| StyI | CCWWGG | 1 cut(s) | 300 |
| TaaI | ACNGT | 3 cut(s) | 107, 161, 448 |
| TaiI | ACGT | 1 cut(s) | 883 |
| TaqI | TCGA | 1 cut(s) | 883 |
| TasI | AATT | 8 cut(s) | 95, 273, 318, 410, 462, 502, 638, 732 |
| TatI | WGTACW | 1 cut(s) | 768 |
| TfiI | GAWTC | 1 cut(s) | 625 |
| Tru1I | TTAA | 1 cut(s) | 927 |
| Tru9I | TTAA | 1 cut(s) | 927 |
| TseFI | GTSAC | 1 cut(s) | 873 |
| TseI | GCWGC | 3 cut(s) | 406, 527, 530 |
| Tsp45I | GTSAC | 1 cut(s) | 873 |
| TspDTI | ATGAA | 8 cut(s) | 210, 241, 356, 360, 440, 486, 496, 618 |
| TspGWI | ACGGA | 1 cut(s) | 743 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 786 |
| VpaK11BI | GGWCC | 1 cut(s) | 922 |
| XapI | RAATTY | 1 cut(s) | 502 |
| XceI | RCATGY | 3 cut(s) | 84, 828, 832 |
| XspI | CTAG | 3 cut(s) | 62, 239, 867 |
| Zsp2I | ATGCAT | 4 cut(s) | 52, 439, 830, 834 |