transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 416 |
| AcsI | RAATTY | 2 cut(s) | 24, 108 |
| AgsI | TTSAA | 4 cut(s) | 31, 256, 314, 346 |
| AjnI | CCWGG | 2 cut(s) | 244, 375 |
| AleI | CACNNNNGTG | 1 cut(s) | 290 |
| AluBI | AGCT | 2 cut(s) | 34, 91 |
| AluI | AGCT | 2 cut(s) | 34, 91 |
| Alw26I | GTCTC | 3 cut(s) | 229, 368, 374 |
| AlwI | GGATC | 1 cut(s) | 416 |
| ApeKI | GCWGC | 2 cut(s) | 88, 403 |
| ApoI | RAATTY | 2 cut(s) | 24, 108 |
| AseI | ATTAAT | 1 cut(s) | 318 |
| AspLEI | GCGC | 1 cut(s) | 153 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuII | TTCGAA | 1 cut(s) | 195 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BbvI | GCAGC | 2 cut(s) | 100, 415 |
| BccI | CCATC | 2 cut(s) | 94, 262 |
| BciT130I | CCWGG | 2 cut(s) | 246, 377 |
| BcoDI | GTCTC | 3 cut(s) | 229, 368, 374 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BisI | GCNGC | 2 cut(s) | 89, 404 |
| BlsI | GCNGC | 2 cut(s) | 90, 405 |
| Bme1390I | CCNGG | 2 cut(s) | 246, 377 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmiI | GGNNCC | 1 cut(s) | 273 |
| BmrFI | CCNGG | 2 cut(s) | 246, 377 |
| BpmI | CTGGAG | 1 cut(s) | 398 |
| Bpu14I | TTCGAA | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 1 cut(s) | 346 |
| BsaJI | CCNNGG | 2 cut(s) | 245, 301 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 409 |
| Bse3DI | GCAATG | 1 cut(s) | 83 |
| BseBI | CCWGG | 2 cut(s) | 246, 377 |
| BseDI | CCNNGG | 2 cut(s) | 245, 301 |
| BseMI | GCAATG | 1 cut(s) | 83 |
| BseMII | CTCAG | 1 cut(s) | 224 |
| BseXI | GCAGC | 2 cut(s) | 100, 415 |
| Bsh1285I | CGRYCG | 1 cut(s) | 266 |
| BsiEI | CGRYCG | 1 cut(s) | 266 |
| BsmAI | GTCTC | 3 cut(s) | 229, 368, 374 |
| BsmBI | CGTCTC | 1 cut(s) | 368 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| Bsp119I | TTCGAA | 1 cut(s) | 195 |
| Bsp143I | GATC | 1 cut(s) | 421 |
| Bsp19I | CCATGG | 1 cut(s) | 301 |
| BspCNI | CTCAG | 1 cut(s) | 225 |
| BspLI | GGNNCC | 1 cut(s) | 273 |
| BspPI | GGATC | 1 cut(s) | 416 |
| BspT104I | TTCGAA | 1 cut(s) | 195 |
| BsrDI | GCAATG | 1 cut(s) | 83 |
| BssECI | CCNNGG | 2 cut(s) | 245, 301 |
| BssMI | GATC | 1 cut(s) | 421 |
| BssT1I | CCWWGG | 1 cut(s) | 301 |
| Bst2UI | CCWGG | 2 cut(s) | 246, 377 |
| BstBI | TTCGAA | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 1 cut(s) | 18 |
| BstDEI | CTNAG | 1 cut(s) | 233 |
| BstDSI | CCRYGG | 1 cut(s) | 301 |
| BstHHI | GCGC | 1 cut(s) | 153 |
| BstKTI | GATC | 1 cut(s) | 424 |
| BstMAI | GTCTC | 3 cut(s) | 229, 368, 374 |
| BstMBI | GATC | 1 cut(s) | 421 |
| BstMCI | CGRYCG | 1 cut(s) | 266 |
| BstNI | CCWGG | 2 cut(s) | 246, 377 |
| BstNSI | RCATGY | 1 cut(s) | 410 |
| BstSCI | CCNGG | 2 cut(s) | 244, 375 |
| BstV1I | GCAGC | 2 cut(s) | 100, 415 |
| BtgI | CCRYGG | 1 cut(s) | 301 |
| BtsIMutI | CAGTG | 1 cut(s) | 417 |
| Cac8I | GCNNGC | 1 cut(s) | 18 |
| CfoI | GCGC | 1 cut(s) | 153 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| CviAII | CATG | 3 cut(s) | 167, 302, 407 |
| CviJI | RGCY | 2 cut(s) | 34, 91 |
| CviKI_1 | RGCY | 2 cut(s) | 34, 91 |
| DdeI | CTNAG | 1 cut(s) | 233 |
| DpnI | GATC | 1 cut(s) | 423 |
| DpnII | GATC | 1 cut(s) | 421 |
| Eco130I | CCWWGG | 1 cut(s) | 301 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| EcoRII | CCWGG | 2 cut(s) | 244, 375 |
| EcoT14I | CCWWGG | 1 cut(s) | 301 |
| ErhI | CCWWGG | 1 cut(s) | 301 |
| Esp3I | CGTCTC | 1 cut(s) | 368 |
| FaeI | CATG | 3 cut(s) | 170, 305, 410 |
| FaiI | YATR | 9 cut(s) | 53, 55, 126, 168, 220, 222, 303, 341, 408 |
| FatI | CATG | 3 cut(s) | 166, 301, 406 |
| Fnu4HI | GCNGC | 2 cut(s) | 89, 404 |
| Fsp4HI | GCNGC | 2 cut(s) | 89, 404 |
| FspBI | CTAG | 1 cut(s) | 38 |
| GlaI | GCGC | 1 cut(s) | 152 |
| GluI | GCNGC | 2 cut(s) | 89, 404 |
| GsuI | CTGGAG | 1 cut(s) | 398 |
| HhaI | GCGC | 1 cut(s) | 153 |
| Hin1II | CATG | 3 cut(s) | 170, 305, 410 |
| Hin6I | GCGC | 1 cut(s) | 151 |
| HinP1I | GCGC | 1 cut(s) | 151 |
| HincII | GTYRAC | 1 cut(s) | 359 |
| HindII | GTYRAC | 1 cut(s) | 359 |
| HinfI | GANTC | 2 cut(s) | 119, 237 |
| Hpy166II | GTNNAC | 2 cut(s) | 142, 359 |
| Hpy188I | TCNGA | 1 cut(s) | 67 |
| Hpy188III | TCNNGA | 1 cut(s) | 228 |
| Hpy8I | GTNNAC | 2 cut(s) | 142, 359 |
| HpyAV | CCTTC | 1 cut(s) | 424 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 134 |
| HpyF3I | CTNAG | 1 cut(s) | 233 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92II | CATG | 3 cut(s) | 170, 305, 410 |
| HspAI | GCGC | 1 cut(s) | 151 |
| Kzo9I | GATC | 1 cut(s) | 421 |
| LmnI | GCTCC | 3 cut(s) | 39, 148, 305 |
| LpnPI | CCDG | 5 cut(s) | 231, 258, 266, 362, 389 |
| Lsp1109I | GCAGC | 2 cut(s) | 100, 415 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MaeIII | GTNAC | 1 cut(s) | 283 |
| MalI | GATC | 1 cut(s) | 423 |
| MboI | GATC | 1 cut(s) | 421 |
| MfeI | CAATTG | 1 cut(s) | 309 |
| MluCI | AATT | 5 cut(s) | 24, 60, 108, 309, 315 |
| MlyI | GAGTC | 2 cut(s) | 128, 231 |
| MmeI | TCCRAC | 1 cut(s) | 391 |
| MnlI | CCTC | 4 cut(s) | 97, 153, 321, 435 |
| MseI | TTAA | 1 cut(s) | 318 |
| MslI | CAYNNNNRTG | 1 cut(s) | 290 |
| MspA1I | CMGCKG | 1 cut(s) | 91 |
| MspR9I | CCNGG | 2 cut(s) | 246, 377 |
| MunI | CAATTG | 1 cut(s) | 309 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| MvaI | CCWGG | 2 cut(s) | 246, 377 |
| NcoI | CCATGG | 1 cut(s) | 301 |
| NdeII | GATC | 1 cut(s) | 421 |
| NlaIII | CATG | 3 cut(s) | 170, 305, 410 |
| NlaIV | GGNNCC | 1 cut(s) | 273 |
| NmuCI | GTSAC | 1 cut(s) | 283 |
| NspI | RCATGY | 1 cut(s) | 410 |
| NspV | TTCGAA | 1 cut(s) | 195 |
| OliI | CACNNNNGTG | 1 cut(s) | 290 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PkrI | GCNGC | 2 cut(s) | 90, 405 |
| PleI | GAGTC | 2 cut(s) | 127, 231 |
| PpsI | GAGTC | 2 cut(s) | 127, 231 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| PshBI | ATTAAT | 1 cut(s) | 318 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| Psp6I | CCWGG | 2 cut(s) | 244, 375 |
| PspGI | CCWGG | 2 cut(s) | 244, 375 |
| PspN4I | GGNNCC | 1 cut(s) | 273 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PvuII | CAGCTG | 1 cut(s) | 91 |
| RseI | CAYNNNNRTG | 1 cut(s) | 290 |
| SaqAI | TTAA | 1 cut(s) | 318 |
| SatI | GCNGC | 2 cut(s) | 89, 404 |
| Sau3AI | GATC | 1 cut(s) | 421 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| SchI | GAGTC | 2 cut(s) | 128, 231 |
| ScrFI | CCNGG | 2 cut(s) | 246, 377 |
| SetI | ASST | 7 cut(s) | 36, 93, 164, 213, 364, 373, 378 |
| SfuI | TTCGAA | 1 cut(s) | 195 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 290 |
| SmlI | CTYRAG | 1 cut(s) | 325 |
| SmoI | CTYRAG | 1 cut(s) | 325 |
| Sse9I | AATT | 5 cut(s) | 24, 60, 108, 309, 315 |
| SspMI | CTAG | 1 cut(s) | 38 |
| StyD4I | CCNGG | 2 cut(s) | 244, 375 |
| StyI | CCWWGG | 1 cut(s) | 301 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TaqI | TCGA | 3 cut(s) | 195, 229, 266 |
| TaqII | GACCGA | 1 cut(s) | 252 |
| TasI | AATT | 5 cut(s) | 24, 60, 108, 309, 315 |
| Tru1I | TTAA | 1 cut(s) | 318 |
| Tru9I | TTAA | 1 cut(s) | 318 |
| TscAI | CASTG | 1 cut(s) | 424 |
| TseFI | GTSAC | 1 cut(s) | 283 |
| TseI | GCWGC | 2 cut(s) | 88, 403 |
| Tsp45I | GTSAC | 1 cut(s) | 283 |
| TspDTI | ATGAA | 2 cut(s) | 17, 155 |
| TspRI | CASTG | 1 cut(s) | 424 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| VspI | ATTAAT | 1 cut(s) | 318 |
| XapI | RAATTY | 2 cut(s) | 24, 108 |
| XceI | RCATGY | 1 cut(s) | 410 |
| XspI | CTAG | 1 cut(s) | 38 |