protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 3 - 128 | 1.4e-22 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 192 - 289 | 6.2e-36 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 216 - 304 | 1.8e-34 | RNase H-like domain found in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 60 |
| AarI | CACCTGC | 1 cut(s) | 172 |
| Acc16I | TGCGCA | 1 cut(s) | 528 |
| Acc36I | ACCTGC | 2 cut(s) | 172, 476 |
| AccI | GTMKAC | 1 cut(s) | 420 |
| AciI | CCGC | 2 cut(s) | 17, 499 |
| AfaI | GTAC | 2 cut(s) | 121, 853 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 610 |
| AflII | CTTAAG | 1 cut(s) | 605 |
| AgsI | TTSAA | 7 cut(s) | 176, 277, 298, 311, 401, 551, 598 |
| AluBI | AGCT | 1 cut(s) | 884 |
| AluI | AGCT | 1 cut(s) | 884 |
| AoxI | GGCC | 1 cut(s) | 912 |
| ApeKI | GCWGC | 3 cut(s) | 529, 712, 881 |
| AspLEI | GCGC | 1 cut(s) | 529 |
| AsuC2I | CCSGG | 1 cut(s) | 80 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 843, 876 |
| BbvI | GCAGC | 3 cut(s) | 541, 724, 893 |
| BccI | CCATC | 2 cut(s) | 38, 260 |
| BclI | TGATCA | 2 cut(s) | 85, 874 |
| BcnI | CCSGG | 1 cut(s) | 80 |
| BfaI | CTAG | 2 cut(s) | 371, 753 |
| BfmI | CTRYAG | 1 cut(s) | 810 |
| BfrI | CTTAAG | 1 cut(s) | 605 |
| BfuAI | ACCTGC | 2 cut(s) | 172, 476 |
| BisI | GCNGC | 3 cut(s) | 530, 713, 882 |
| BlsI | GCNGC | 3 cut(s) | 531, 714, 883 |
| Bme1390I | CCNGG | 1 cut(s) | 80 |
| BmiI | GGNNCC | 2 cut(s) | 627, 653 |
| BmrFI | CCNGG | 1 cut(s) | 80 |
| BmsI | GCATC | 5 cut(s) | 170, 568, 667, 757, 758 |
| BpmI | CTGGAG | 1 cut(s) | 627 |
| BpuEI | CTTGAG | 1 cut(s) | 872 |
| BpuMI | CCSGG | 1 cut(s) | 80 |
| BsaJI | CCNNGG | 1 cut(s) | 78 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 610, 640 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 610 |
| BseDI | CCNNGG | 1 cut(s) | 78 |
| BseGI | GGATG | 2 cut(s) | 88, 241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 610 |
| BseXI | GCAGC | 3 cut(s) | 541, 724, 893 |
| BshFI | GGCC | 1 cut(s) | 914 |
| BsiSI | CCGG | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 610 |
| BsmI | GAATGC | 1 cut(s) | 593 |
| BsnI | GGCC | 1 cut(s) | 914 |
| Bsp143I | GATC | 2 cut(s) | 85, 874 |
| BspACI | CCGC | 2 cut(s) | 17, 499 |
| BspANI | GGCC | 1 cut(s) | 914 |
| BspLI | GGNNCC | 2 cut(s) | 627, 653 |
| BspMI | ACCTGC | 2 cut(s) | 172, 476 |
| BspTI | CTTAAG | 1 cut(s) | 605 |
| BssECI | CCNNGG | 1 cut(s) | 78 |
| BssMI | GATC | 2 cut(s) | 85, 874 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| BstAFI | CTTAAG | 1 cut(s) | 605 |
| BstC8I | GCNNGC | 1 cut(s) | 583 |
| BstDEI | CTNAG | 2 cut(s) | 284, 414 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 608 |
| BstF5I | GGATG | 2 cut(s) | 88, 241 |
| BstHHI | GCGC | 1 cut(s) | 529 |
| BstKTI | GATC | 2 cut(s) | 88, 877 |
| BstMBI | GATC | 2 cut(s) | 85, 874 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 189, 698 |
| BstNSI | RCATGY | 2 cut(s) | 111, 585 |
| BstSCI | CCNGG | 1 cut(s) | 78 |
| BstSFI | CTRYAG | 1 cut(s) | 810 |
| BstV1I | GCAGC | 3 cut(s) | 541, 724, 893 |
| BsuRI | GGCC | 1 cut(s) | 914 |
| BtgZI | GCGATG | 1 cut(s) | 690 |
| BtsCI | GGATG | 2 cut(s) | 88, 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 250 |
| BveI | ACCTGC | 2 cut(s) | 172, 476 |
| Cac8I | GCNNGC | 1 cut(s) | 583 |
| CfoI | GCGC | 1 cut(s) | 529 |
| Csp6I | GTAC | 2 cut(s) | 120, 852 |
| CviAII | CATG | 7 cut(s) | 108, 184, 349, 482, 582, 734, 878 |
| CviJI | RGCY | 8 cut(s) | 532, 563, 614, 626, 654, 884, 914, 919 |
| CviKI_1 | RGCY | 8 cut(s) | 532, 563, 614, 626, 654, 884, 914, 919 |
| CviQI | GTAC | 2 cut(s) | 120, 852 |
| DdeI | CTNAG | 2 cut(s) | 284, 414 |
| DpnI | GATC | 2 cut(s) | 87, 876 |
| DpnII | GATC | 2 cut(s) | 85, 874 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 608 |
| EcoT22I | ATGCAT | 3 cut(s) | 185, 583, 751 |
| FaeI | CATG | 7 cut(s) | 111, 187, 352, 485, 585, 737, 881 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 789, 821 |
| FatI | CATG | 7 cut(s) | 107, 183, 348, 481, 581, 733, 877 |
| FauI | CCCGC | 1 cut(s) | 10 |
| FbaI | TGATCA | 2 cut(s) | 85, 874 |
| FblI | GTMKAC | 1 cut(s) | 420 |
| Fnu4HI | GCNGC | 3 cut(s) | 530, 713, 882 |
| FokI | GGATG | 2 cut(s) | 95, 248 |
| Fsp4HI | GCNGC | 3 cut(s) | 530, 713, 882 |
| FspBI | CTAG | 2 cut(s) | 371, 753 |
| FspI | TGCGCA | 1 cut(s) | 528 |
| GlaI | GCGC | 1 cut(s) | 528 |
| GluI | GCNGC | 3 cut(s) | 530, 713, 882 |
| GsuI | CTGGAG | 1 cut(s) | 627 |
| HaeIII | GGCC | 1 cut(s) | 914 |
| HapII | CCGG | 1 cut(s) | 80 |
| HhaI | GCGC | 1 cut(s) | 529 |
| Hin1II | CATG | 7 cut(s) | 111, 187, 352, 485, 585, 737, 881 |
| Hin6I | GCGC | 1 cut(s) | 527 |
| HinP1I | GCGC | 1 cut(s) | 527 |
| HpaII | CCGG | 1 cut(s) | 80 |
| Hpy166II | GTNNAC | 1 cut(s) | 421 |
| Hpy188I | TCNGA | 3 cut(s) | 202, 388, 685 |
| Hpy188III | TCNNGA | 5 cut(s) | 41, 89, 644, 753, 901 |
| Hpy8I | GTNNAC | 1 cut(s) | 421 |
| Hpy99I | CGWCG | 1 cut(s) | 138 |
| HpyAV | CCTTC | 1 cut(s) | 665 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 7 cut(s) | 161, 183, 485, 581, 749, 821, 881 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 189, 698 |
| HpyF3I | CTNAG | 2 cut(s) | 284, 414 |
| Hsp92II | CATG | 7 cut(s) | 111, 187, 352, 485, 585, 737, 881 |
| HspAI | GCGC | 1 cut(s) | 527 |
| Ksp22I | TGATCA | 2 cut(s) | 85, 874 |
| Kzo9I | GATC | 2 cut(s) | 85, 874 |
| LmnI | GCTCC | 3 cut(s) | 590, 631, 651 |
| LpnPI | CCDG | 5 cut(s) | 39, 93, 177, 471, 657 |
| Lsp1109I | GCAGC | 3 cut(s) | 541, 724, 893 |
| LweI | GCATC | 5 cut(s) | 170, 568, 667, 757, 758 |
| MaeI | CTAG | 2 cut(s) | 371, 753 |
| MaeIII | GTNAC | 2 cut(s) | 341, 431 |
| MalI | GATC | 2 cut(s) | 87, 876 |
| MboI | GATC | 2 cut(s) | 85, 874 |
| MluCI | AATT | 7 cut(s) | 66, 216, 256, 328, 773, 778, 800 |
| MmeI | TCCRAC | 1 cut(s) | 470 |
| MnlI | CCTC | 8 cut(s) | 217, 451, 454, 550, 604, 651, 741, 904 |
| Mph1103I | ATGCAT | 3 cut(s) | 185, 583, 751 |
| MseI | TTAA | 4 cut(s) | 327, 354, 606, 776 |
| MspCI | CTTAAG | 1 cut(s) | 605 |
| MspI | CCGG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 80 |
| Mva1269I | GAATGC | 1 cut(s) | 593 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 189, 698 |
| NciI | CCSGG | 1 cut(s) | 80 |
| NdeII | GATC | 2 cut(s) | 85, 874 |
| NlaIII | CATG | 7 cut(s) | 111, 187, 352, 485, 585, 737, 881 |
| NlaIV | GGNNCC | 2 cut(s) | 627, 653 |
| NmuCI | GTSAC | 2 cut(s) | 341, 431 |
| NsbI | TGCGCA | 1 cut(s) | 528 |
| NsiI | ATGCAT | 3 cut(s) | 185, 583, 751 |
| NspI | RCATGY | 2 cut(s) | 111, 585 |
| PaeI | GCATGC | 1 cut(s) | 585 |
| PaqCI | CACCTGC | 1 cut(s) | 172 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 689 |
| PctI | GAATGC | 1 cut(s) | 593 |
| PkrI | GCNGC | 3 cut(s) | 531, 714, 883 |
| PsiI | TTATAA | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 2 cut(s) | 627, 653 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 411, 443 |
| RsaI | GTAC | 2 cut(s) | 121, 853 |
| RsaNI | GTAC | 2 cut(s) | 120, 852 |
| SaqAI | TTAA | 4 cut(s) | 327, 354, 606, 776 |
| SatI | GCNGC | 3 cut(s) | 530, 713, 882 |
| Sau3AI | GATC | 2 cut(s) | 85, 874 |
| ScrFI | CCNGG | 1 cut(s) | 80 |
| SfaNI | GCATC | 5 cut(s) | 170, 568, 667, 757, 758 |
| SfcI | CTRYAG | 1 cut(s) | 810 |
| SmlI | CTYRAG | 2 cut(s) | 605, 887 |
| SmoI | CTYRAG | 2 cut(s) | 605, 887 |
| SphI | GCATGC | 1 cut(s) | 585 |
| Sse9I | AATT | 7 cut(s) | 66, 216, 256, 328, 773, 778, 800 |
| SsiI | CCGC | 2 cut(s) | 17, 499 |
| SspMI | CTAG | 2 cut(s) | 371, 753 |
| StyD4I | CCNGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TaqI | TCGA | 3 cut(s) | 541, 567, 663 |
| TaqII | GACCGA | 1 cut(s) | 825 |
| TasI | AATT | 7 cut(s) | 66, 216, 256, 328, 773, 778, 800 |
| Tru1I | TTAA | 4 cut(s) | 327, 354, 606, 776 |
| Tru9I | TTAA | 4 cut(s) | 327, 354, 606, 776 |
| TscAI | CASTG | 1 cut(s) | 250 |
| TseFI | GTSAC | 2 cut(s) | 341, 431 |
| TseI | GCWGC | 3 cut(s) | 529, 712, 881 |
| Tsp45I | GTSAC | 2 cut(s) | 341, 431 |
| TspDTI | ATGAA | 4 cut(s) | 15, 249, 337, 493 |
| TspRI | CASTG | 1 cut(s) | 250 |
| Vha464I | CTTAAG | 1 cut(s) | 605 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 608 |
| XbaI | TCTAGA | 1 cut(s) | 752 |
| XceI | RCATGY | 2 cut(s) | 111, 585 |
| XmiI | GTMKAC | 1 cut(s) | 420 |
| XspI | CTAG | 2 cut(s) | 371, 753 |
| Zsp2I | ATGCAT | 3 cut(s) | 185, 583, 751 |