transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 420 |
| AccI | GTMKAC | 1 cut(s) | 346 |
| AciI | CCGC | 2 cut(s) | 566, 864 |
| AclI | AACGTT | 1 cut(s) | 386 |
| AclWI | GGATC | 2 cut(s) | 475, 795 |
| AcsI | RAATTY | 2 cut(s) | 161, 822 |
| AcyI | GRCGYC | 1 cut(s) | 417 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AfeI | AGCGCT | 1 cut(s) | 1057 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 49, 252, 434 |
| AgeI | ACCGGT | 1 cut(s) | 736 |
| AgsI | TTSAA | 6 cut(s) | 410, 679, 781, 955, 1052, 1120 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 941 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 417, 449 |
| AluBI | AGCT | 5 cut(s) | 140, 215, 817, 832, 985 |
| AluI | AGCT | 5 cut(s) | 140, 215, 817, 832, 985 |
| Alw21I | GWGCWC | 1 cut(s) | 1128 |
| Alw26I | GTCTC | 1 cut(s) | 563 |
| AlwI | GGATC | 2 cut(s) | 475, 795 |
| Aor51HI | AGCGCT | 1 cut(s) | 1057 |
| AoxI | GGCC | 2 cut(s) | 40, 660 |
| ApeKI | GCWGC | 1 cut(s) | 212 |
| ApoI | RAATTY | 2 cut(s) | 161, 822 |
| AsiGI | ACCGGT | 1 cut(s) | 736 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 162, 387, 923 |
| AspLEI | GCGC | 1 cut(s) | 1058 |
| AspS9I | GGNCC | 3 cut(s) | 614, 660, 1004 |
| AsuHPI | GGTGA | 1 cut(s) | 511 |
| AvaII | GGWCC | 2 cut(s) | 614, 1004 |
| BbsI | GAAGAC | 1 cut(s) | 611 |
| Bbv12I | GWGCWC | 1 cut(s) | 1128 |
| BbvI | GCAGC | 1 cut(s) | 224 |
| BccI | CCATC | 2 cut(s) | 455, 1168 |
| BceAI | ACGGC | 3 cut(s) | 17, 269, 510 |
| BciVI | GTATCC | 1 cut(s) | 261 |
| BclI | TGATCA | 1 cut(s) | 205 |
| BcoDI | GTCTC | 1 cut(s) | 563 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BfmI | CTRYAG | 3 cut(s) | 609, 664, 1108 |
| BfoI | RGCGCY | 1 cut(s) | 1059 |
| BfuI | GTATCC | 1 cut(s) | 261 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 706 |
| BisI | GCNGC | 1 cut(s) | 213 |
| BlsI | GCNGC | 1 cut(s) | 214 |
| Bme18I | GGWCC | 2 cut(s) | 614, 1004 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 941 |
| BmgT120I | GGNCC | 3 cut(s) | 614, 660, 1004 |
| BmiI | GGNNCC | 4 cut(s) | 31, 426, 1006, 1155 |
| BmsI | GCATC | 6 cut(s) | 20, 89, 232, 355, 640, 1159 |
| BpiI | GAAGAC | 1 cut(s) | 611 |
| BpuEI | CTTGAG | 4 cut(s) | 361, 488, 854, 943 |
| BsaAI | YACGTR | 1 cut(s) | 1129 |
| BsaHI | GRCGYC | 1 cut(s) | 417 |
| BsaJI | CCNNGG | 3 cut(s) | 24, 251, 428 |
| BsaWI | WCCGGW | 1 cut(s) | 736 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 625, 655 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 49, 252, 434 |
| Bse118I | RCCGGY | 1 cut(s) | 736 |
| BseDI | CCNNGG | 3 cut(s) | 24, 251, 428 |
| BseGI | GGATG | 5 cut(s) | 11, 247, 370, 544, 1160 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 49, 252, 434 |
| BseRI | GAGGAG | 2 cut(s) | 851, 1151 |
| BseXI | GCAGC | 1 cut(s) | 224 |
| BsgI | GTGCAG | 1 cut(s) | 1059 |
| BshFI | GGCC | 2 cut(s) | 42, 662 |
| BshTI | ACCGGT | 1 cut(s) | 736 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1128 |
| BsiSI | CCGG | 1 cut(s) | 737 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 49, 252, 434 |
| BsmAI | GTCTC | 1 cut(s) | 563 |
| BsmI | GAATGC | 1 cut(s) | 674 |
| BsnI | GGCC | 2 cut(s) | 42, 662 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1128 |
| Bsp143I | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| Bsp19I | CCATGG | 1 cut(s) | 24 |
| BspACI | CCGC | 2 cut(s) | 566, 864 |
| BspANI | GGCC | 2 cut(s) | 42, 662 |
| BspHI | TCATGA | 1 cut(s) | 898 |
| BspLI | GGNNCC | 4 cut(s) | 31, 426, 1006, 1155 |
| BspPI | GGATC | 2 cut(s) | 475, 795 |
| BsrFI | RCCGGY | 1 cut(s) | 736 |
| BssAI | RCCGGY | 1 cut(s) | 736 |
| BssECI | CCNNGG | 3 cut(s) | 24, 251, 428 |
| BssMI | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| BssNI | GRCGYC | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 2 cut(s) | 24, 428 |
| Bst4CI | ACNGT | 3 cut(s) | 402, 610, 1147 |
| Bst6I | CTCTTC | 1 cut(s) | 977 |
| BstACI | GRCGYC | 1 cut(s) | 417 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 365 |
| BstBAI | YACGTR | 1 cut(s) | 1129 |
| BstDEI | CTNAG | 3 cut(s) | 136, 154, 186 |
| BstDSI | CCRYGG | 2 cut(s) | 24, 251 |
| BstF5I | GGATG | 5 cut(s) | 11, 247, 370, 544, 1160 |
| BstH2I | RGCGCY | 1 cut(s) | 1059 |
| BstHHI | GCGC | 1 cut(s) | 1058 |
| BstKTI | GATC | 9 cut(s) | 72, 170, 208, 337, 470, 588, 640, 790, 873 |
| BstMAI | GTCTC | 1 cut(s) | 563 |
| BstMBI | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 29, 365, 659, 706, 764 |
| BstNSI | RCATGY | 1 cut(s) | 697 |
| BstSFI | CTRYAG | 3 cut(s) | 609, 664, 1108 |
| BstV1I | GCAGC | 1 cut(s) | 224 |
| BstV2I | GAAGAC | 1 cut(s) | 611 |
| BstX2I | RGATCY | 1 cut(s) | 467 |
| BstYI | RGATCY | 1 cut(s) | 467 |
| BsuI | GTATCC | 1 cut(s) | 261 |
| BsuRI | GGCC | 2 cut(s) | 42, 662 |
| BtgI | CCRYGG | 2 cut(s) | 24, 251 |
| BtgZI | GCGATG | 1 cut(s) | 474 |
| BtsCI | GGATG | 5 cut(s) | 11, 247, 370, 544, 1160 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| CciI | TCATGA | 1 cut(s) | 898 |
| CfoI | GCGC | 1 cut(s) | 1058 |
| Cfr10I | RCCGGY | 1 cut(s) | 736 |
| Cfr13I | GGNCC | 3 cut(s) | 614, 660, 1004 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CspAI | ACCGGT | 1 cut(s) | 736 |
| CviQI | GTAC | 1 cut(s) | 223 |
| DdeI | CTNAG | 3 cut(s) | 136, 154, 186 |
| DpnI | GATC | 9 cut(s) | 71, 169, 207, 336, 469, 587, 639, 789, 872 |
| DpnII | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| DriI | GACNNNNNGTC | 1 cut(s) | 941 |
| Eam1104I | CTCTTC | 1 cut(s) | 977 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 941 |
| EarI | CTCTTC | 1 cut(s) | 977 |
| EciI | GGCGGA | 2 cut(s) | 581, 853 |
| Eco130I | CCWWGG | 2 cut(s) | 24, 428 |
| Eco47I | GGWCC | 2 cut(s) | 614, 1004 |
| Eco47III | AGCGCT | 1 cut(s) | 1057 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1004 |
| EcoT14I | CCWWGG | 2 cut(s) | 24, 428 |
| EcoT22I | ATGCAT | 3 cut(s) | 13, 82, 1174 |
| ErhI | CCWWGG | 2 cut(s) | 24, 428 |
| FbaI | TGATCA | 1 cut(s) | 205 |
| FblI | GTMKAC | 1 cut(s) | 346 |
| Fnu4HI | GCNGC | 1 cut(s) | 213 |
| FokI | GGATG | 4 cut(s) | 254, 377, 531, 1147 |
| Fsp4HI | GCNGC | 1 cut(s) | 213 |
| FspBI | CTAG | 1 cut(s) | 38 |
| GlaI | GCGC | 1 cut(s) | 1057 |
| GluI | GCNGC | 1 cut(s) | 213 |
| HaeII | RGCGCY | 1 cut(s) | 1059 |
| HaeIII | GGCC | 2 cut(s) | 42, 662 |
| HapII | CCGG | 1 cut(s) | 737 |
| HhaI | GCGC | 1 cut(s) | 1058 |
| Hin1I | GRCGYC | 1 cut(s) | 417 |
| Hin6I | GCGC | 1 cut(s) | 1056 |
| HinP1I | GCGC | 1 cut(s) | 1056 |
| HindIII | AAGCTT | 1 cut(s) | 983 |
| HinfI | GANTC | 2 cut(s) | 860, 1048 |
| HpaII | CCGG | 1 cut(s) | 737 |
| HphI | GGTGA | 1 cut(s) | 511 |
| Hpy166II | GTNNAC | 2 cut(s) | 347, 415 |
| Hpy188I | TCNGA | 3 cut(s) | 16, 205, 382 |
| Hpy188III | TCNNGA | 8 cut(s) | 84, 392, 505, 791, 899, 928, 960, 1065 |
| Hpy8I | GTNNAC | 2 cut(s) | 347, 415 |
| HpyAV | CCTTC | 5 cut(s) | 232, 284, 304, 619, 883 |
| HpyCH4III | ACNGT | 3 cut(s) | 402, 610, 1147 |
| HpyCH4IV | ACGT | 4 cut(s) | 262, 386, 417, 1128 |
| HpyCH4V | TGCA | 8 cut(s) | 11, 80, 181, 212, 480, 674, 1040, 1172 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 29, 365, 659, 706, 764 |
| HpyF3I | CTNAG | 3 cut(s) | 136, 154, 186 |
| HpySE526I | ACGT | 4 cut(s) | 262, 386, 417, 1128 |
| Hsp92I | GRCGYC | 1 cut(s) | 417 |
| HspAI | GCGC | 1 cut(s) | 1056 |
| Ksp22I | TGATCA | 1 cut(s) | 205 |
| Kzo9I | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| LmnI | GCTCC | 4 cut(s) | 29, 748, 1123, 1153 |
| LpnPI | CCDG | 4 cut(s) | 405, 652, 750, 786 |
| Lsp1109I | GCAGC | 1 cut(s) | 224 |
| LweI | GCATC | 6 cut(s) | 20, 89, 232, 355, 640, 1159 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MaeII | ACGT | 4 cut(s) | 262, 386, 417, 1128 |
| MaeIII | GTNAC | 3 cut(s) | 317, 517, 1129 |
| MalI | GATC | 9 cut(s) | 71, 169, 207, 336, 469, 587, 639, 789, 872 |
| MboI | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| MboII | GAAGA | 2 cut(s) | 616, 964 |
| MflI | RGATCY | 1 cut(s) | 467 |
| MhlI | GDGCHC | 1 cut(s) | 1128 |
| MluCI | AATT | 3 cut(s) | 109, 161, 822 |
| MlyI | GAGTC | 1 cut(s) | 854 |
| MmeI | TCCRAC | 2 cut(s) | 245, 726 |
| MnlI | CCTC | 9 cut(s) | 91, 213, 355, 558, 615, 790, 829, 908, 1129 |
| Mph1103I | ATGCAT | 3 cut(s) | 13, 82, 1174 |
| MroXI | GAANNNNTTC | 3 cut(s) | 162, 387, 923 |
| MseI | TTAA | 4 cut(s) | 771, 965, 1077, 1098 |
| MslI | CAYNNNNRTG | 1 cut(s) | 374 |
| MspI | CCGG | 1 cut(s) | 737 |
| Mva1269I | GAATGC | 1 cut(s) | 674 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 29, 365, 659, 706, 764 |
| NcoI | CCATGG | 1 cut(s) | 24 |
| NdeII | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| NlaIV | GGNNCC | 4 cut(s) | 31, 426, 1006, 1155 |
| NmuCI | GTSAC | 2 cut(s) | 317, 517 |
| NsiI | ATGCAT | 3 cut(s) | 13, 82, 1174 |
| NspI | RCATGY | 1 cut(s) | 697 |
| PagI | TCATGA | 1 cut(s) | 898 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 259 |
| PctI | GAATGC | 1 cut(s) | 674 |
| PdmI | GAANNNNTTC | 3 cut(s) | 162, 387, 923 |
| PfeI | GAWTC | 1 cut(s) | 1048 |
| PinAI | ACCGGT | 1 cut(s) | 736 |
| PkrI | GCNGC | 1 cut(s) | 214 |
| PleI | GAGTC | 1 cut(s) | 854 |
| PpsI | GAGTC | 1 cut(s) | 854 |
| Ppu21I | YACGTR | 1 cut(s) | 1129 |
| PpuMI | RGGWCCY | 1 cut(s) | 1004 |
| Psp1406I | AACGTT | 1 cut(s) | 386 |
| Psp5II | RGGWCCY | 1 cut(s) | 1004 |
| PspN4I | GGNNCC | 4 cut(s) | 31, 426, 1006, 1155 |
| PspPI | GGNCC | 3 cut(s) | 614, 660, 1004 |
| PspPPI | RGGWCCY | 1 cut(s) | 1004 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 973, 1005 |
| PsuI | RGATCY | 1 cut(s) | 467 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| RseI | CAYNNNNRTG | 1 cut(s) | 374 |
| SaqAI | TTAA | 4 cut(s) | 771, 965, 1077, 1098 |
| SatI | GCNGC | 1 cut(s) | 213 |
| Sau3AI | GATC | 9 cut(s) | 69, 167, 205, 334, 467, 585, 637, 787, 870 |
| Sau96I | GGNCC | 3 cut(s) | 614, 660, 1004 |
| SchI | GAGTC | 1 cut(s) | 854 |
| SduI | GDGCHC | 1 cut(s) | 1128 |
| SfaNI | GCATC | 6 cut(s) | 20, 89, 232, 355, 640, 1159 |
| SfcI | CTRYAG | 3 cut(s) | 609, 664, 1108 |
| SinI | GGWCC | 2 cut(s) | 614, 1004 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 374 |
| SmlI | CTYRAG | 4 cut(s) | 340, 503, 833, 958 |
| SmoI | CTYRAG | 4 cut(s) | 340, 503, 833, 958 |
| Sse9I | AATT | 3 cut(s) | 109, 161, 822 |
| SsiI | CCGC | 2 cut(s) | 566, 864 |
| SspI | AATATT | 1 cut(s) | 597 |
| SspMI | CTAG | 1 cut(s) | 38 |
| StyI | CCWWGG | 2 cut(s) | 24, 428 |
| TaaI | ACNGT | 3 cut(s) | 402, 610, 1147 |
| TaiI | ACGT | 4 cut(s) | 265, 389, 420, 1131 |
| TaqI | TCGA | 4 cut(s) | 166, 294, 790, 927 |
| TasI | AATT | 3 cut(s) | 109, 161, 822 |
| TfiI | GAWTC | 1 cut(s) | 1048 |
| Tru1I | TTAA | 4 cut(s) | 771, 965, 1077, 1098 |
| Tru9I | TTAA | 4 cut(s) | 771, 965, 1077, 1098 |
| TscAI | CASTG | 1 cut(s) | 127 |
| TseFI | GTSAC | 2 cut(s) | 317, 517 |
| TseI | GCWGC | 1 cut(s) | 212 |
| Tsp45I | GTSAC | 2 cut(s) | 317, 517 |
| TspDTI | ATGAA | 2 cut(s) | 411, 864 |
| TspGWI | ACGGA | 1 cut(s) | 1148 |
| TspRI | CASTG | 1 cut(s) | 127 |
| VpaK11BI | GGWCC | 2 cut(s) | 614, 1004 |
| XapI | RAATTY | 2 cut(s) | 161, 822 |
| XceI | RCATGY | 1 cut(s) | 697 |
| XmiI | GTMKAC | 1 cut(s) | 346 |
| XmnI | GAANNNNTTC | 3 cut(s) | 162, 387, 923 |
| XspI | CTAG | 1 cut(s) | 38 |
| ZraI | GACGTC | 1 cut(s) | 418 |
| Zsp2I | ATGCAT | 3 cut(s) | 13, 82, 1174 |