transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 495 |
| AciI | CCGC | 1 cut(s) | 149 |
| AclWI | GGATC | 3 cut(s) | 126, 139, 269 |
| AcoI | YGGCCR | 1 cut(s) | 150 |
| AcsI | RAATTY | 1 cut(s) | 439 |
| AfaI | GTAC | 1 cut(s) | 417 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 380 |
| AgsI | TTSAA | 2 cut(s) | 83, 504 |
| AluBI | AGCT | 2 cut(s) | 560, 605 |
| AluI | AGCT | 2 cut(s) | 560, 605 |
| Alw21I | GWGCWC | 1 cut(s) | 170 |
| Alw26I | GTCTC | 2 cut(s) | 26, 120 |
| AlwI | GGATC | 3 cut(s) | 126, 139, 269 |
| AoxI | GGCC | 1 cut(s) | 150 |
| ApeKI | GCWGC | 1 cut(s) | 560 |
| ApoI | RAATTY | 1 cut(s) | 439 |
| AspS9I | GGNCC | 1 cut(s) | 497 |
| AsuC2I | CCSGG | 1 cut(s) | 381 |
| AsuHPI | GGTGA | 1 cut(s) | 584 |
| AvaII | GGWCC | 1 cut(s) | 497 |
| BamHI | GGATCC | 1 cut(s) | 131 |
| BanII | GRGCYC | 1 cut(s) | 387 |
| Bbv12I | GWGCWC | 1 cut(s) | 170 |
| BbvI | GCAGC | 1 cut(s) | 547 |
| BccI | CCATC | 4 cut(s) | 122, 216, 527, 553 |
| BceAI | ACGGC | 1 cut(s) | 56 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcnI | CCSGG | 1 cut(s) | 381 |
| BcoDI | GTCTC | 2 cut(s) | 26, 120 |
| BisI | GCNGC | 2 cut(s) | 150, 561 |
| BlsI | GCNGC | 2 cut(s) | 151, 562 |
| Bme1390I | CCNGG | 1 cut(s) | 381 |
| Bme18I | GGWCC | 1 cut(s) | 497 |
| BmgT120I | GGNCC | 1 cut(s) | 497 |
| BmiI | GGNNCC | 2 cut(s) | 133, 555 |
| BmrFI | CCNGG | 1 cut(s) | 381 |
| BmsI | GCATC | 2 cut(s) | 190, 572 |
| BoxI | GACNNNNGTC | 1 cut(s) | 628 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 322, 354 |
| BpmI | CTGGAG | 2 cut(s) | 325, 604 |
| BpuMI | CCSGG | 1 cut(s) | 381 |
| BsaI | GGTCTC | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 3 cut(s) | 38, 250, 380 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 380 |
| BseDI | CCNNGG | 3 cut(s) | 38, 250, 380 |
| BseGI | GGATG | 4 cut(s) | 227, 313, 478, 563 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BseMII | CTCAG | 1 cut(s) | 131 |
| BseXI | GCAGC | 1 cut(s) | 547 |
| BshFI | GGCC | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 1 cut(s) | 170 |
| BsiSI | CCGG | 1 cut(s) | 380 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BsmAI | GTCTC | 2 cut(s) | 26, 120 |
| BsnI | GGCC | 1 cut(s) | 152 |
| Bso31I | GGTCTC | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 2 cut(s) | 170, 387 |
| Bsp143I | GATC | 3 cut(s) | 131, 190, 274 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspANI | GGCC | 1 cut(s) | 152 |
| BspCNI | CTCAG | 1 cut(s) | 130 |
| BspLI | GGNNCC | 2 cut(s) | 133, 555 |
| BspPI | GGATC | 3 cut(s) | 126, 139, 269 |
| BspQI | GCTCTTC | 1 cut(s) | 504 |
| BspTNI | GGTCTC | 1 cut(s) | 26 |
| BssECI | CCNNGG | 3 cut(s) | 38, 250, 380 |
| BssMI | GATC | 3 cut(s) | 131, 190, 274 |
| BssT1I | CCWWGG | 1 cut(s) | 250 |
| Bst4CI | ACNGT | 2 cut(s) | 106, 492 |
| Bst6I | CTCTTC | 1 cut(s) | 504 |
| BstDEI | CTNAG | 1 cut(s) | 117 |
| BstDSI | CCRYGG | 1 cut(s) | 38 |
| BstF5I | GGATG | 4 cut(s) | 227, 313, 478, 563 |
| BstKTI | GATC | 3 cut(s) | 134, 193, 277 |
| BstMAI | GTCTC | 2 cut(s) | 26, 120 |
| BstMBI | GATC | 3 cut(s) | 131, 190, 274 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 628 |
| BstSCI | CCNGG | 1 cut(s) | 379 |
| BstV1I | GCAGC | 1 cut(s) | 547 |
| BstX2I | RGATCY | 1 cut(s) | 131 |
| BstYI | RGATCY | 1 cut(s) | 131 |
| BsuRI | GGCC | 1 cut(s) | 152 |
| BtgI | CCRYGG | 1 cut(s) | 38 |
| BtsCI | GGATG | 4 cut(s) | 227, 313, 478, 563 |
| BtsIMutI | CAGTG | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 497 |
| Csp6I | GTAC | 1 cut(s) | 416 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 222, 257 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviQI | GTAC | 1 cut(s) | 416 |
| DdeI | CTNAG | 1 cut(s) | 117 |
| DpnI | GATC | 3 cut(s) | 133, 192, 276 |
| DpnII | GATC | 3 cut(s) | 131, 190, 274 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 495 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 495 |
| EaeI | YGGCCR | 1 cut(s) | 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 504 |
| EarI | CTCTTC | 1 cut(s) | 504 |
| Eco130I | CCWWGG | 1 cut(s) | 250 |
| Eco24I | GRGCYC | 1 cut(s) | 387 |
| Eco31I | GGTCTC | 1 cut(s) | 26 |
| Eco47I | GGWCC | 1 cut(s) | 497 |
| EcoT14I | CCWWGG | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 387 |
| ErhI | CCWWGG | 1 cut(s) | 250 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 7 cut(s) | 14, 155, 173, 280, 366, 470, 597 |
| FatI | CATG | 1 cut(s) | 153 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 2 cut(s) | 150, 561 |
| FokI | GGATG | 4 cut(s) | 234, 300, 485, 550 |
| FriOI | GRGCYC | 1 cut(s) | 387 |
| Fsp4HI | GCNGC | 2 cut(s) | 150, 561 |
| GluI | GCNGC | 2 cut(s) | 150, 561 |
| GsuI | CTGGAG | 2 cut(s) | 325, 604 |
| HaeIII | GGCC | 1 cut(s) | 152 |
| HapII | CCGG | 1 cut(s) | 380 |
| Hin1II | CATG | 1 cut(s) | 157 |
| HinfI | GANTC | 1 cut(s) | 457 |
| HpaII | CCGG | 1 cut(s) | 380 |
| HphI | GGTGA | 1 cut(s) | 584 |
| Hpy188I | TCNGA | 3 cut(s) | 76, 445, 527 |
| Hpy188III | TCNNGA | 3 cut(s) | 461, 611, 621 |
| HpyAV | CCTTC | 1 cut(s) | 510 |
| HpyCH4III | ACNGT | 2 cut(s) | 106, 492 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 68, 142, 175, 233, 563 |
| HpyF3I | CTNAG | 1 cut(s) | 117 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 3 cut(s) | 131, 190, 274 |
| LguI | GCTCTTC | 1 cut(s) | 504 |
| LmnI | GCTCC | 2 cut(s) | 451, 602 |
| LpnPI | CCDG | 7 cut(s) | 104, 161, 289, 393, 480, 500, 570 |
| Lsp1109I | GCAGC | 1 cut(s) | 547 |
| LweI | GCATC | 2 cut(s) | 190, 572 |
| MaeIII | GTNAC | 1 cut(s) | 264 |
| MalI | GATC | 3 cut(s) | 133, 192, 276 |
| MboI | GATC | 3 cut(s) | 131, 190, 274 |
| MboII | GAAGA | 3 cut(s) | 372, 521, 542 |
| MfeI | CAATTG | 1 cut(s) | 203 |
| MflI | RGATCY | 1 cut(s) | 131 |
| MhlI | GDGCHC | 2 cut(s) | 170, 387 |
| MluCI | AATT | 5 cut(s) | 69, 203, 295, 439, 478 |
| MlyI | GAGTC | 1 cut(s) | 466 |
| MnlI | CCTC | 6 cut(s) | 52, 210, 212, 348, 357, 387 |
| MseI | TTAA | 2 cut(s) | 323, 634 |
| MslI | CAYNNNNRTG | 1 cut(s) | 186 |
| MspA1I | CMGCKG | 1 cut(s) | 560 |
| MspI | CCGG | 1 cut(s) | 380 |
| MspR9I | CCNGG | 1 cut(s) | 381 |
| MunI | CAATTG | 1 cut(s) | 203 |
| NciI | CCSGG | 1 cut(s) | 381 |
| NdeII | GATC | 3 cut(s) | 131, 190, 274 |
| NlaIII | CATG | 1 cut(s) | 157 |
| NlaIV | GGNNCC | 2 cut(s) | 133, 555 |
| NmuCI | GTSAC | 1 cut(s) | 264 |
| PciSI | GCTCTTC | 1 cut(s) | 504 |
| PkrI | GCNGC | 2 cut(s) | 151, 562 |
| PleI | GAGTC | 1 cut(s) | 465 |
| PpsI | GAGTC | 1 cut(s) | 465 |
| PshAI | GACNNNNGTC | 1 cut(s) | 628 |
| PspN4I | GGNNCC | 2 cut(s) | 133, 555 |
| PspPI | GGNCC | 1 cut(s) | 497 |
| PsuI | RGATCY | 1 cut(s) | 131 |
| PvuII | CAGCTG | 1 cut(s) | 560 |
| RsaI | GTAC | 1 cut(s) | 417 |
| RsaNI | GTAC | 1 cut(s) | 416 |
| RseI | CAYNNNNRTG | 1 cut(s) | 186 |
| SapI | GCTCTTC | 1 cut(s) | 504 |
| SaqAI | TTAA | 2 cut(s) | 323, 634 |
| SatI | GCNGC | 2 cut(s) | 150, 561 |
| Sau3AI | GATC | 3 cut(s) | 131, 190, 274 |
| Sau96I | GGNCC | 1 cut(s) | 497 |
| SchI | GAGTC | 1 cut(s) | 466 |
| ScrFI | CCNGG | 1 cut(s) | 381 |
| SduI | GDGCHC | 2 cut(s) | 170, 387 |
| SfaNI | GCATC | 2 cut(s) | 190, 572 |
| SinI | GGWCC | 1 cut(s) | 497 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 186 |
| Sse9I | AATT | 5 cut(s) | 69, 203, 295, 439, 478 |
| SsiI | CCGC | 1 cut(s) | 149 |
| StyD4I | CCNGG | 1 cut(s) | 379 |
| StyI | CCWWGG | 1 cut(s) | 250 |
| TaaI | ACNGT | 2 cut(s) | 106, 492 |
| TasI | AATT | 5 cut(s) | 69, 203, 295, 439, 478 |
| TauI | GCSGC | 1 cut(s) | 152 |
| Tru1I | TTAA | 2 cut(s) | 323, 634 |
| Tru9I | TTAA | 2 cut(s) | 323, 634 |
| TscAI | CASTG | 1 cut(s) | 109 |
| TseFI | GTSAC | 1 cut(s) | 264 |
| TseI | GCWGC | 1 cut(s) | 560 |
| Tsp45I | GTSAC | 1 cut(s) | 264 |
| TspDTI | ATGAA | 1 cut(s) | 29 |
| TspGWI | ACGGA | 1 cut(s) | 556 |
| TspRI | CASTG | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 1 cut(s) | 497 |
| XapI | RAATTY | 1 cut(s) | 439 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 324 |