RNA splicing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AfaI | GTAC | 3 cut(s) | 81, 117, 291 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 259 |
| AgsI | TTSAA | 2 cut(s) | 203, 220 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 295, 327 |
| AluBI | AGCT | 2 cut(s) | 268, 318 |
| AluI | AGCT | 2 cut(s) | 268, 318 |
| Alw21I | GWGCWC | 1 cut(s) | 320 |
| Alw26I | GTCTC | 1 cut(s) | 277 |
| AoxI | GGCC | 2 cut(s) | 130, 276 |
| AspS9I | GGNCC | 1 cut(s) | 277 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 107, 140 |
| BalI | TGGCCA | 1 cut(s) | 132 |
| BanII | GRGCYC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 1 cut(s) | 320 |
| BcoDI | GTCTC | 1 cut(s) | 277 |
| BfaI | CTAG | 1 cut(s) | 269 |
| BfmI | CTRYAG | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 1 cut(s) | 277 |
| BmiI | GGNNCC | 2 cut(s) | 279, 305 |
| BmsI | GCATC | 2 cut(s) | 318, 340 |
| BpmI | CTGGAG | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 1 cut(s) | 242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 295, 325 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 259 |
| BseGI | GGATG | 1 cut(s) | 331 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BshFI | GGCC | 2 cut(s) | 132, 278 |
| BsiHKAI | GWGCWC | 1 cut(s) | 320 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BsmAI | GTCTC | 1 cut(s) | 277 |
| BsnI | GGCC | 2 cut(s) | 132, 278 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| BspANI | GGCC | 2 cut(s) | 132, 278 |
| BspLI | GGNNCC | 2 cut(s) | 279, 305 |
| Bst6I | CTCTTC | 1 cut(s) | 225 |
| BstF5I | GGATG | 1 cut(s) | 331 |
| BstMAI | GTCTC | 1 cut(s) | 277 |
| BstSFI | CTRYAG | 1 cut(s) | 145 |
| BsuRI | GGCC | 2 cut(s) | 132, 278 |
| BtgZI | GCGATG | 1 cut(s) | 341 |
| BtsCI | GGATG | 1 cut(s) | 331 |
| Cfr13I | GGNCC | 1 cut(s) | 277 |
| Csp6I | GTAC | 3 cut(s) | 80, 116, 290 |
| CviAII | CATG | 2 cut(s) | 134, 321 |
| CviJI | RGCY | 5 cut(s) | 132, 268, 278, 306, 318 |
| CviKI_1 | RGCY | 5 cut(s) | 132, 268, 278, 306, 318 |
| CviQI | GTAC | 3 cut(s) | 80, 116, 290 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 225 |
| EarI | CTCTTC | 1 cut(s) | 225 |
| Ecl136II | GAGCTC | 1 cut(s) | 318 |
| Eco24I | GRGCYC | 1 cut(s) | 320 |
| Eco53kI | GAGCTC | 1 cut(s) | 318 |
| EcoICRI | GAGCTC | 1 cut(s) | 318 |
| EcoT22I | ATGCAT | 2 cut(s) | 333, 345 |
| EcoT38I | GRGCYC | 1 cut(s) | 320 |
| FaeI | CATG | 2 cut(s) | 137, 324 |
| FaiI | YATR | 6 cut(s) | 17, 30, 135, 147, 322, 341 |
| FatI | CATG | 2 cut(s) | 133, 320 |
| FokI | GGATG | 1 cut(s) | 318 |
| FriOI | GRGCYC | 1 cut(s) | 320 |
| FspBI | CTAG | 1 cut(s) | 269 |
| GsuI | CTGGAG | 1 cut(s) | 279 |
| HaeIII | GGCC | 2 cut(s) | 132, 278 |
| Hin1II | CATG | 2 cut(s) | 137, 324 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 336 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| HpyCH4IV | ACGT | 2 cut(s) | 82, 118 |
| HpyCH4V | TGCA | 4 cut(s) | 53, 137, 331, 343 |
| HpySE526I | ACGT | 2 cut(s) | 82, 118 |
| Hsp92II | CATG | 2 cut(s) | 137, 324 |
| LmnI | GCTCC | 1 cut(s) | 303 |
| LpnPI | CCDG | 2 cut(s) | 123, 309 |
| LweI | GCATC | 2 cut(s) | 318, 340 |
| MaeI | CTAG | 1 cut(s) | 269 |
| MaeII | ACGT | 2 cut(s) | 82, 118 |
| MaeIII | GTNAC | 1 cut(s) | 83 |
| MboII | GAAGA | 1 cut(s) | 242 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MlsI | TGGCCA | 1 cut(s) | 132 |
| MluCI | AATT | 2 cut(s) | 48, 238 |
| MluNI | TGGCCA | 1 cut(s) | 132 |
| MmeI | TCCRAC | 1 cut(s) | 204 |
| MnlI | CCTC | 5 cut(s) | 103, 106, 195, 303, 317 |
| Mox20I | TGGCCA | 1 cut(s) | 132 |
| Mph1103I | ATGCAT | 2 cut(s) | 333, 345 |
| MscI | TGGCCA | 1 cut(s) | 132 |
| MseI | TTAA | 1 cut(s) | 249 |
| Msp20I | TGGCCA | 1 cut(s) | 132 |
| NlaIII | CATG | 2 cut(s) | 137, 324 |
| NlaIV | GGNNCC | 2 cut(s) | 279, 305 |
| NmeAIII | GCCGAG | 1 cut(s) | 254 |
| NmuCI | GTSAC | 1 cut(s) | 83 |
| NsiI | ATGCAT | 2 cut(s) | 333, 345 |
| Psp124BI | GAGCTC | 1 cut(s) | 320 |
| PspN4I | GGNNCC | 2 cut(s) | 279, 305 |
| PspPI | GGNCC | 1 cut(s) | 277 |
| RsaI | GTAC | 3 cut(s) | 81, 117, 291 |
| RsaNI | GTAC | 3 cut(s) | 80, 116, 290 |
| SacI | GAGCTC | 1 cut(s) | 320 |
| SaqAI | TTAA | 1 cut(s) | 249 |
| Sau96I | GGNCC | 1 cut(s) | 277 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SetI | ASST | 8 cut(s) | 16, 78, 85, 117, 121, 270, 295, 320 |
| SfaNI | GCATC | 2 cut(s) | 318, 340 |
| SfcI | CTRYAG | 1 cut(s) | 145 |
| SmlI | CTYRAG | 1 cut(s) | 257 |
| SmoI | CTYRAG | 1 cut(s) | 257 |
| Sse9I | AATT | 2 cut(s) | 48, 238 |
| SspMI | CTAG | 1 cut(s) | 269 |
| SstI | GAGCTC | 1 cut(s) | 320 |
| TaiI | ACGT | 2 cut(s) | 85, 121 |
| TaqI | TCGA | 2 cut(s) | 65, 314 |
| TasI | AATT | 2 cut(s) | 48, 238 |
| Tru1I | TTAA | 1 cut(s) | 249 |
| Tru9I | TTAA | 1 cut(s) | 249 |
| TseFI | GTSAC | 1 cut(s) | 83 |
| Tsp45I | GTSAC | 1 cut(s) | 83 |
| TspDTI | ATGAA | 1 cut(s) | 243 |
| TspGWI | ACGGA | 1 cut(s) | 299 |
| XspI | CTAG | 1 cut(s) | 269 |
| Zsp2I | ATGCAT | 2 cut(s) | 333, 345 |