strictosidine synthase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 1 - 50 | 1.9e-06 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 115 - 157 | 6.3e-06 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 148 - 191 | 1.3e-10 | RNase H-like domain found in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 195 |
| AccB1I | GGYRCC | 1 cut(s) | 409 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 118 |
| AciI | CCGC | 2 cut(s) | 254, 731 |
| AclWI | GGATC | 1 cut(s) | 475 |
| AcsI | RAATTY | 2 cut(s) | 85, 582 |
| AcyI | GRCGYC | 1 cut(s) | 192 |
| AfaI | GTAC | 2 cut(s) | 63, 509 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 118 |
| AflIII | ACRYGT | 1 cut(s) | 145 |
| AgsI | TTSAA | 6 cut(s) | 68, 288, 367, 376, 434, 710 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 625 |
| AjnI | CCWGG | 1 cut(s) | 629 |
| AleI | CACNNNNGTG | 1 cut(s) | 221 |
| AluBI | AGCT | 1 cut(s) | 320 |
| AluI | AGCT | 1 cut(s) | 320 |
| AlwI | GGATC | 1 cut(s) | 475 |
| AoxI | GGCC | 2 cut(s) | 247, 393 |
| ApeKI | GCWGC | 1 cut(s) | 497 |
| ApoI | RAATTY | 2 cut(s) | 85, 582 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 177, 209 |
| AseI | ATTAAT | 1 cut(s) | 437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 681 |
| AspS9I | GGNCC | 2 cut(s) | 247, 394 |
| AsuHPI | GGTGA | 2 cut(s) | 133, 190 |
| AxyI | CCTNAGG | 1 cut(s) | 503 |
| BanI | GGYRCC | 1 cut(s) | 409 |
| BbvI | GCAGC | 1 cut(s) | 509 |
| BccI | CCATC | 2 cut(s) | 57, 543 |
| BciT130I | CCWGG | 1 cut(s) | 631 |
| BciVI | GTATCC | 1 cut(s) | 546 |
| BclI | TGATCA | 2 cut(s) | 291, 490 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BfuI | GTATCC | 1 cut(s) | 546 |
| BisI | GCNGC | 1 cut(s) | 498 |
| BlsI | GCNGC | 1 cut(s) | 499 |
| BmcAI | AGTACT | 1 cut(s) | 63 |
| Bme1390I | CCNGG | 1 cut(s) | 631 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 625 |
| BmgT120I | GGNCC | 2 cut(s) | 247, 394 |
| BmiI | GGNNCC | 3 cut(s) | 25, 396, 411 |
| BmrFI | CCNGG | 1 cut(s) | 631 |
| BmsI | GCATC | 2 cut(s) | 349, 517 |
| BsaHI | GRCGYC | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 3 cut(s) | 390, 646, 722 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 118 |
| Bse21I | CCTNAGG | 1 cut(s) | 503 |
| BseBI | CCWGG | 1 cut(s) | 631 |
| BseDI | CCNNGG | 3 cut(s) | 390, 646, 722 |
| BseGI | GGATG | 3 cut(s) | 10, 364, 532 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 27 |
| BseXI | GCAGC | 1 cut(s) | 509 |
| BshFI | GGCC | 2 cut(s) | 249, 395 |
| BshNI | GGYRCC | 1 cut(s) | 409 |
| BslFI | GGGAC | 1 cut(s) | 156 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BsmFI | GGGAC | 1 cut(s) | 156 |
| BsmI | GAATGC | 1 cut(s) | 362 |
| BsnI | GGCC | 2 cut(s) | 249, 395 |
| Bsp143I | GATC | 3 cut(s) | 291, 467, 490 |
| Bsp19I | CCATGG | 2 cut(s) | 646, 722 |
| BspACI | CCGC | 2 cut(s) | 254, 731 |
| BspANI | GGCC | 2 cut(s) | 249, 395 |
| BspCNI | CTCAG | 1 cut(s) | 26 |
| BspLI | GGNNCC | 3 cut(s) | 25, 396, 411 |
| BspPI | GGATC | 1 cut(s) | 475 |
| BspT107I | GGYRCC | 1 cut(s) | 409 |
| BssECI | CCNNGG | 3 cut(s) | 390, 646, 722 |
| BssMI | GATC | 3 cut(s) | 291, 467, 490 |
| BssNI | GRCGYC | 1 cut(s) | 192 |
| BssT1I | CCWWGG | 2 cut(s) | 646, 722 |
| Bst2UI | CCWGG | 1 cut(s) | 631 |
| Bst4CI | ACNGT | 2 cut(s) | 223, 819 |
| BstACI | GRCGYC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 13, 503 |
| BstDSI | CCRYGG | 2 cut(s) | 646, 722 |
| BstF5I | GGATG | 3 cut(s) | 10, 364, 532 |
| BstKTI | GATC | 3 cut(s) | 294, 470, 493 |
| BstMBI | GATC | 3 cut(s) | 291, 467, 490 |
| BstNI | CCWGG | 1 cut(s) | 631 |
| BstNSI | RCATGY | 1 cut(s) | 149 |
| BstSCI | CCNGG | 1 cut(s) | 629 |
| BstV1I | GCAGC | 1 cut(s) | 509 |
| BstX2I | RGATCY | 1 cut(s) | 467 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 653 |
| BstYI | RGATCY | 1 cut(s) | 467 |
| Bsu36I | CCTNAGG | 1 cut(s) | 503 |
| BsuI | GTATCC | 1 cut(s) | 546 |
| BsuRI | GGCC | 2 cut(s) | 249, 395 |
| BtgI | CCRYGG | 2 cut(s) | 646, 722 |
| BtsCI | GGATG | 3 cut(s) | 10, 364, 532 |
| BtsI | GCAGTG | 1 cut(s) | 607 |
| BtsIMutI | CAGTG | 3 cut(s) | 21, 219, 607 |
| Cfr13I | GGNCC | 2 cut(s) | 247, 394 |
| Csp6I | GTAC | 2 cut(s) | 62, 508 |
| CviAII | CATG | 5 cut(s) | 146, 251, 494, 647, 723 |
| CviJI | RGCY | 9 cut(s) | 182, 212, 249, 320, 350, 395, 500, 617, 634 |
| CviKI_1 | RGCY | 9 cut(s) | 182, 212, 249, 320, 350, 395, 500, 617, 634 |
| CviQI | GTAC | 2 cut(s) | 62, 508 |
| DdeI | CTNAG | 2 cut(s) | 13, 503 |
| DpnI | GATC | 3 cut(s) | 293, 469, 492 |
| DpnII | GATC | 3 cut(s) | 291, 467, 490 |
| DriI | GACNNNNNGTC | 1 cut(s) | 625 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 625 |
| Eco130I | CCWWGG | 2 cut(s) | 646, 722 |
| Eco81I | CCTNAGG | 1 cut(s) | 503 |
| EcoRII | CCWGG | 1 cut(s) | 629 |
| EcoT14I | CCWWGG | 2 cut(s) | 646, 722 |
| EcoT22I | ATGCAT | 1 cut(s) | 364 |
| ErhI | CCWWGG | 2 cut(s) | 646, 722 |
| FaeI | CATG | 5 cut(s) | 149, 254, 497, 650, 726 |
| FaqI | GGGAC | 1 cut(s) | 156 |
| FatI | CATG | 5 cut(s) | 145, 250, 493, 646, 722 |
| FauI | CCCGC | 1 cut(s) | 247 |
| FbaI | TGATCA | 2 cut(s) | 291, 490 |
| Fnu4HI | GCNGC | 1 cut(s) | 498 |
| FokI | GGATG | 3 cut(s) | 17, 371, 539 |
| Fsp4HI | GCNGC | 1 cut(s) | 498 |
| FspBI | CTAG | 1 cut(s) | 156 |
| GluI | GCNGC | 1 cut(s) | 498 |
| HaeIII | GGCC | 2 cut(s) | 249, 395 |
| Hin1I | GRCGYC | 1 cut(s) | 192 |
| Hin1II | CATG | 5 cut(s) | 149, 254, 497, 650, 726 |
| HinfI | GANTC | 1 cut(s) | 677 |
| HphI | GGTGA | 2 cut(s) | 133, 190 |
| Hpy166II | GTNNAC | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 490 |
| Hpy188III | TCNNGA | 5 cut(s) | 77, 587, 686, 710, 785 |
| Hpy8I | GTNNAC | 1 cut(s) | 175 |
| Hpy99I | CGWCG | 1 cut(s) | 270 |
| HpyAV | CCTTC | 3 cut(s) | 220, 517, 589 |
| HpyCH4III | ACNGT | 2 cut(s) | 223, 819 |
| HpyCH4IV | ACGT | 1 cut(s) | 192 |
| HpyCH4V | TGCA | 3 cut(s) | 309, 362, 497 |
| HpyF3I | CTNAG | 2 cut(s) | 13, 503 |
| HpySE526I | ACGT | 1 cut(s) | 192 |
| Hsp92I | GRCGYC | 1 cut(s) | 192 |
| Hsp92II | CATG | 5 cut(s) | 149, 254, 497, 650, 726 |
| Ksp22I | TGATCA | 2 cut(s) | 291, 490 |
| Kzo9I | GATC | 3 cut(s) | 291, 467, 490 |
| LpnPI | CCDG | 6 cut(s) | 62, 426, 616, 643, 699, 770 |
| Lsp1109I | GCAGC | 1 cut(s) | 509 |
| LweI | GCATC | 2 cut(s) | 349, 517 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 192 |
| MaeIII | GTNAC | 1 cut(s) | 423 |
| MalI | GATC | 3 cut(s) | 293, 469, 492 |
| MboI | GATC | 3 cut(s) | 291, 467, 490 |
| MfeI | CAATTG | 1 cut(s) | 97 |
| MflI | RGATCY | 1 cut(s) | 467 |
| MluCI | AATT | 8 cut(s) | 85, 97, 113, 132, 186, 434, 582, 742 |
| MmeI | TCCRAC | 1 cut(s) | 634 |
| MnlI | CCTC | 3 cut(s) | 37, 163, 400 |
| Mph1103I | ATGCAT | 1 cut(s) | 364 |
| MroXI | GAANNNNTTC | 1 cut(s) | 681 |
| MseI | TTAA | 5 cut(s) | 45, 276, 437, 636, 741 |
| MslI | CAYNNNNRTG | 2 cut(s) | 203, 221 |
| MspR9I | CCNGG | 1 cut(s) | 631 |
| MunI | CAATTG | 1 cut(s) | 97 |
| Mva1269I | GAATGC | 1 cut(s) | 362 |
| MvaI | CCWGG | 1 cut(s) | 631 |
| NcoI | CCATGG | 2 cut(s) | 646, 722 |
| NdeII | GATC | 3 cut(s) | 291, 467, 490 |
| NlaIII | CATG | 5 cut(s) | 149, 254, 497, 650, 726 |
| NlaIV | GGNNCC | 3 cut(s) | 25, 396, 411 |
| NmeAIII | GCCGAG | 1 cut(s) | 371 |
| NsiI | ATGCAT | 1 cut(s) | 364 |
| NspI | RCATGY | 1 cut(s) | 149 |
| OliI | CACNNNNGTG | 1 cut(s) | 221 |
| PciI | ACATGT | 1 cut(s) | 145 |
| PctI | GAATGC | 1 cut(s) | 362 |
| PdmI | GAANNNNTTC | 1 cut(s) | 681 |
| PfeI | GAWTC | 1 cut(s) | 677 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 499 |
| PscI | ACATGT | 1 cut(s) | 145 |
| PshBI | ATTAAT | 1 cut(s) | 437 |
| Psp6I | CCWGG | 1 cut(s) | 629 |
| PspGI | CCWGG | 1 cut(s) | 629 |
| PspN4I | GGNNCC | 3 cut(s) | 25, 396, 411 |
| PspPI | GGNCC | 2 cut(s) | 247, 394 |
| PsuI | RGATCY | 1 cut(s) | 467 |
| RsaI | GTAC | 2 cut(s) | 63, 509 |
| RsaNI | GTAC | 2 cut(s) | 62, 508 |
| RseI | CAYNNNNRTG | 2 cut(s) | 203, 221 |
| SaqAI | TTAA | 5 cut(s) | 45, 276, 437, 636, 741 |
| SatI | GCNGC | 1 cut(s) | 498 |
| Sau3AI | GATC | 3 cut(s) | 291, 467, 490 |
| Sau96I | GGNCC | 2 cut(s) | 247, 394 |
| ScaI | AGTACT | 1 cut(s) | 63 |
| ScrFI | CCNGG | 1 cut(s) | 631 |
| SetI | ASST | 9 cut(s) | 174, 195, 322, 392, 430, 455, 509, 664, 777 |
| SfaNI | GCATC | 2 cut(s) | 349, 517 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 203, 221 |
| Sse9I | AATT | 8 cut(s) | 85, 97, 113, 132, 186, 434, 582, 742 |
| SsiI | CCGC | 2 cut(s) | 254, 731 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 629 |
| StyI | CCWWGG | 2 cut(s) | 646, 722 |
| TaaI | ACNGT | 2 cut(s) | 223, 819 |
| TaiI | ACGT | 1 cut(s) | 195 |
| TaqI | TCGA | 1 cut(s) | 586 |
| TasI | AATT | 8 cut(s) | 85, 97, 113, 132, 186, 434, 582, 742 |
| TatI | WGTACW | 1 cut(s) | 61 |
| TfiI | GAWTC | 1 cut(s) | 677 |
| Tru1I | TTAA | 5 cut(s) | 45, 276, 437, 636, 741 |
| Tru9I | TTAA | 5 cut(s) | 45, 276, 437, 636, 741 |
| TscAI | CASTG | 3 cut(s) | 21, 226, 607 |
| TseI | GCWGC | 1 cut(s) | 497 |
| TspDTI | ATGAA | 7 cut(s) | 51, 262, 326, 396, 654, 690, 705 |
| TspRI | CASTG | 3 cut(s) | 21, 226, 607 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 118 |
| VspI | ATTAAT | 1 cut(s) | 437 |
| XapI | RAATTY | 2 cut(s) | 85, 582 |
| XceI | RCATGY | 1 cut(s) | 149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 681 |
| XspI | CTAG | 1 cut(s) | 156 |
| ZraI | GACGTC | 1 cut(s) | 193 |
| ZrmI | AGTACT | 1 cut(s) | 63 |
| Zsp2I | ATGCAT | 1 cut(s) | 364 |