transferase activity, transferring hexosyl groups
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 175 - 335 | 1.2e-29 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 400 - 497 | 2.5e-30 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 424 - 527 | 2.4e-37 | RNase H-like domain found in reverse transcriptase |
| Integrase_H2C2 | PF17921 | 631 - 688 | 1.4e-15 | Integrase zinc binding domain |
| rve | PF00665 | 709 - 767 | 5.5e-06 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 684 |
| Acc65I | GGTACC | 1 cut(s) | 472 |
| AccB1I | GGYRCC | 3 cut(s) | 472, 1958, 2292 |
| AccI | GTMKAC | 3 cut(s) | 1029, 1491, 2080 |
| AccII | CGCG | 3 cut(s) | 785, 2300, 2302 |
| AccIII | TCCGGA | 1 cut(s) | 2268 |
| AciI | CCGC | 8 cut(s) | 56, 149, 1064, 1184, 1339, 1625, 2093, 2298 |
| AclWI | GGATC | 3 cut(s) | 136, 323, 1635 |
| AcsI | RAATTY | 2 cut(s) | 178, 1454 |
| AcuI | CTGAAG | 3 cut(s) | 15, 327, 1707 |
| AfaI | GTAC | 7 cut(s) | 135, 390, 474, 674, 745, 1850, 1983 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 482 |
| AflIII | ACRYGT | 2 cut(s) | 2042, 2059 |
| AhlI | ACTAGT | 1 cut(s) | 13 |
| AluBI | AGCT | 9 cut(s) | 8, 395, 1240, 1250, 1351, 1426, 1508, 1705, 2192 |
| AluI | AGCT | 9 cut(s) | 8, 395, 1240, 1250, 1351, 1426, 1508, 1705, 2192 |
| Alw21I | GWGCWC | 1 cut(s) | 67 |
| Alw26I | GTCTC | 2 cut(s) | 578, 1040 |
| AlwI | GGATC | 3 cut(s) | 136, 323, 1635 |
| Aor13HI | TCCGGA | 1 cut(s) | 2268 |
| AoxI | GGCC | 1 cut(s) | 2003 |
| ApeKI | GCWGC | 4 cut(s) | 8, 1702, 1973, 2052 |
| ApoI | RAATTY | 2 cut(s) | 178, 1454 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1808 |
| Asp718I | GGTACC | 1 cut(s) | 472 |
| AspLEI | GCGC | 3 cut(s) | 787, 2302, 2304 |
| AspS9I | GGNCC | 1 cut(s) | 2150 |
| AsuHPI | GGTGA | 3 cut(s) | 466, 1048, 1670 |
| AsuII | TTCGAA | 2 cut(s) | 117, 1090 |
| AvaII | GGWCC | 1 cut(s) | 2150 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 664, 697 |
| BanI | GGYRCC | 3 cut(s) | 472, 1958, 2292 |
| BbsI | GAAGAC | 2 cut(s) | 126, 714 |
| Bbv12I | GWGCWC | 1 cut(s) | 67 |
| BbvI | GCAGC | 3 cut(s) | 1714, 1960, 2039 |
| BccI | CCATC | 7 cut(s) | 202, 540, 662, 1085, 1551, 1900, 2167 |
| BceAI | ACGGC | 2 cut(s) | 1033, 1418 |
| BcoDI | GTCTC | 2 cut(s) | 578, 1040 |
| BcuI | ACTAGT | 1 cut(s) | 13 |
| BfaI | CTAG | 6 cut(s) | 14, 1374, 1430, 1937, 1992, 2108 |
| BfmI | CTRYAG | 1 cut(s) | 565 |
| BisI | GCNGC | 6 cut(s) | 9, 149, 1703, 1974, 2053, 2093 |
| BlsI | GCNGC | 6 cut(s) | 10, 150, 1704, 1975, 2054, 2094 |
| Bme18I | GGWCC | 1 cut(s) | 2150 |
| BmgT120I | GGNCC | 1 cut(s) | 2150 |
| BmiI | GGNNCC | 4 cut(s) | 474, 1960, 2151, 2294 |
| BmsI | GCATC | 8 cut(s) | 67, 319, 361, 1291, 1525, 1657, 2011, 2233 |
| BpiI | GAAGAC | 2 cut(s) | 126, 714 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2247 |
| Bpu14I | TTCGAA | 2 cut(s) | 117, 1090 |
| BpuEI | CTTGAG | 1 cut(s) | 2059 |
| BsaBI | GATNNNNATC | 1 cut(s) | 42 |
| BsaJI | CCNNGG | 5 cut(s) | 124, 912, 1099, 1733, 1977 |
| BsaWI | WCCGGW | 2 cut(s) | 1267, 2268 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 480, 510 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 482 |
| Bse3DI | GCAATG | 2 cut(s) | 188, 1924 |
| Bse8I | GATNNNNATC | 1 cut(s) | 42 |
| BseAI | TCCGGA | 1 cut(s) | 2268 |
| BseDI | CCNNGG | 5 cut(s) | 124, 912, 1099, 1733, 1977 |
| BseGI | GGATG | 6 cut(s) | 82, 331, 551, 865, 1846, 2026 |
| BseJI | GATNNNNATC | 1 cut(s) | 42 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 482 |
| BseMI | GCAATG | 2 cut(s) | 188, 1924 |
| BseMII | CTCAG | 3 cut(s) | 387, 882, 1518 |
| BsePI | GCGCGC | 1 cut(s) | 2300 |
| BseXI | GCAGC | 3 cut(s) | 1714, 1960, 2039 |
| Bsh1236I | CGCG | 3 cut(s) | 785, 2300, 2302 |
| BshFI | GGCC | 1 cut(s) | 2005 |
| BshNI | GGYRCC | 3 cut(s) | 472, 1958, 2292 |
| BsiHKAI | GWGCWC | 1 cut(s) | 67 |
| BsiSI | CCGG | 2 cut(s) | 1268, 2269 |
| BslFI | GGGAC | 1 cut(s) | 2163 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 482 |
| BsmAI | GTCTC | 2 cut(s) | 578, 1040 |
| BsmFI | GGGAC | 1 cut(s) | 2163 |
| BsnI | GGCC | 1 cut(s) | 2005 |
| Bsp119I | TTCGAA | 2 cut(s) | 117, 1090 |
| Bsp1286I | GDGCHC | 1 cut(s) | 67 |
| Bsp13I | TCCGGA | 1 cut(s) | 2268 |
| Bsp143I | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| BspACI | CCGC | 8 cut(s) | 56, 149, 1064, 1184, 1339, 1625, 2093, 2298 |
| BspANI | GGCC | 1 cut(s) | 2005 |
| BspCNI | CTCAG | 3 cut(s) | 388, 881, 1517 |
| BspEI | TCCGGA | 1 cut(s) | 2268 |
| BspFNI | CGCG | 3 cut(s) | 785, 2300, 2302 |
| BspHI | TCATGA | 1 cut(s) | 1651 |
| BspLI | GGNNCC | 4 cut(s) | 474, 1960, 2151, 2294 |
| BspPI | GGATC | 3 cut(s) | 136, 323, 1635 |
| BspT104I | TTCGAA | 2 cut(s) | 117, 1090 |
| BspT107I | GGYRCC | 3 cut(s) | 472, 1958, 2292 |
| BsrDI | GCAATG | 2 cut(s) | 188, 1924 |
| BssECI | CCNNGG | 5 cut(s) | 124, 912, 1099, 1733, 1977 |
| BssHII | GCGCGC | 1 cut(s) | 2300 |
| BssMI | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| BssT1I | CCWWGG | 4 cut(s) | 124, 1099, 1733, 1977 |
| Bst4CI | ACNGT | 5 cut(s) | 51, 446, 496, 1158, 1887 |
| BstBI | TTCGAA | 2 cut(s) | 117, 1090 |
| BstC8I | GCNNGC | 2 cut(s) | 789, 2302 |
| BstDEI | CTNAG | 6 cut(s) | 396, 868, 1143, 1504, 1669, 2247 |
| BstF5I | GGATG | 6 cut(s) | 82, 331, 551, 865, 1846, 2026 |
| BstFNI | CGCG | 3 cut(s) | 785, 2300, 2302 |
| BstHHI | GCGC | 3 cut(s) | 787, 2302, 2304 |
| BstKTI | GATC | 7 cut(s) | 131, 318, 598, 1501, 1630, 1873, 2050 |
| BstMAI | GTCTC | 2 cut(s) | 578, 1040 |
| BstMBI | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 62, 647, 1322, 2299 |
| BstNSI | RCATGY | 4 cut(s) | 735, 1361, 1944, 2046 |
| BstSFI | CTRYAG | 1 cut(s) | 565 |
| BstUI | CGCG | 3 cut(s) | 785, 2300, 2302 |
| BstV1I | GCAGC | 3 cut(s) | 1714, 1960, 2039 |
| BstV2I | GAAGAC | 2 cut(s) | 126, 714 |
| BstX2I | RGATCY | 2 cut(s) | 128, 315 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2063 |
| BstYI | RGATCY | 2 cut(s) | 128, 315 |
| BsuRI | GGCC | 1 cut(s) | 2005 |
| BtsCI | GGATG | 6 cut(s) | 82, 331, 551, 865, 1846, 2026 |
| BtsIMutI | CAGTG | 2 cut(s) | 501, 558 |
| Cac8I | GCNNGC | 2 cut(s) | 789, 2302 |
| CciI | TCATGA | 1 cut(s) | 1651 |
| CfoI | GCGC | 3 cut(s) | 787, 2302, 2304 |
| Cfr13I | GGNCC | 1 cut(s) | 2150 |
| CseI | GACGC | 2 cut(s) | 425, 1400 |
| Csp6I | GTAC | 7 cut(s) | 134, 389, 473, 673, 744, 1849, 1982 |
| CviQI | GTAC | 7 cut(s) | 134, 389, 473, 673, 744, 1849, 1982 |
| DdeI | CTNAG | 6 cut(s) | 396, 868, 1143, 1504, 1669, 2247 |
| DpnI | GATC | 7 cut(s) | 130, 317, 597, 1500, 1629, 1872, 2049 |
| DpnII | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| DraI | TTTAAA | 2 cut(s) | 85, 204 |
| EciI | GGCGGA | 1 cut(s) | 1640 |
| Eco130I | CCWWGG | 4 cut(s) | 124, 1099, 1733, 1977 |
| Eco32I | GATATC | 1 cut(s) | 1771 |
| Eco47I | GGWCC | 1 cut(s) | 2150 |
| Eco57I | CTGAAG | 3 cut(s) | 15, 327, 1707 |
| EcoRV | GATATC | 1 cut(s) | 1771 |
| EcoT14I | CCWWGG | 4 cut(s) | 124, 1099, 1733, 1977 |
| EcoT22I | ATGCAT | 2 cut(s) | 312, 1650 |
| ErhI | CCWWGG | 4 cut(s) | 124, 1099, 1733, 1977 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2103, 2135 |
| FaqI | GGGAC | 1 cut(s) | 2163 |
| FauI | CCCGC | 1 cut(s) | 2305 |
| FblI | GTMKAC | 3 cut(s) | 1029, 1491, 2080 |
| Fnu4HI | GCNGC | 6 cut(s) | 9, 149, 1703, 1974, 2053, 2093 |
| FokI | GGATG | 6 cut(s) | 89, 338, 558, 872, 1853, 2033 |
| Fsp4HI | GCNGC | 6 cut(s) | 9, 149, 1703, 1974, 2053, 2093 |
| FspBI | CTAG | 6 cut(s) | 14, 1374, 1430, 1937, 1992, 2108 |
| GlaI | GCGC | 3 cut(s) | 786, 2301, 2303 |
| GluI | GCNGC | 6 cut(s) | 9, 149, 1703, 1974, 2053, 2093 |
| HaeIII | GGCC | 1 cut(s) | 2005 |
| HapII | CCGG | 2 cut(s) | 1268, 2269 |
| HgaI | GACGC | 2 cut(s) | 425, 1400 |
| HhaI | GCGC | 3 cut(s) | 787, 2302, 2304 |
| Hin6I | GCGC | 3 cut(s) | 785, 2300, 2302 |
| HinP1I | GCGC | 3 cut(s) | 785, 2300, 2302 |
| HincII | GTYRAC | 1 cut(s) | 1015 |
| HindII | GTYRAC | 1 cut(s) | 1015 |
| HinfI | GANTC | 7 cut(s) | 586, 691, 890, 1199, 1552, 1809, 1844 |
| HpaII | CCGG | 2 cut(s) | 1268, 2269 |
| HphI | GGTGA | 3 cut(s) | 466, 1048, 1670 |
| Hpy166II | GTNNAC | 5 cut(s) | 104, 1015, 1030, 1492, 2081 |
| Hpy188I | TCNGA | 8 cut(s) | 34, 315, 442, 690, 696, 1612, 1684, 1826 |
| Hpy8I | GTNNAC | 5 cut(s) | 104, 1015, 1030, 1492, 2081 |
| Hpy99I | CGWCG | 1 cut(s) | 1125 |
| HpyAV | CCTTC | 3 cut(s) | 351, 977, 1649 |
| HpyCH4III | ACNGT | 5 cut(s) | 51, 446, 496, 1158, 1887 |
| HpyCH4IV | ACGT | 2 cut(s) | 1123, 2059 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 62, 647, 1322, 2299 |
| HpyF3I | CTNAG | 6 cut(s) | 396, 868, 1143, 1504, 1669, 2247 |
| HpySE526I | ACGT | 2 cut(s) | 1123, 2059 |
| HspAI | GCGC | 3 cut(s) | 785, 2300, 2302 |
| Kpn2I | TCCGGA | 1 cut(s) | 2268 |
| KpnI | GGTACC | 1 cut(s) | 476 |
| Kzo9I | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| LmnI | GCTCC | 2 cut(s) | 1176, 1322 |
| Lsp1109I | GCAGC | 3 cut(s) | 1714, 1960, 2039 |
| LweI | GCATC | 8 cut(s) | 67, 319, 361, 1291, 1525, 1657, 2011, 2233 |
| MaeI | CTAG | 6 cut(s) | 14, 1374, 1430, 1937, 1992, 2108 |
| MaeII | ACGT | 2 cut(s) | 1123, 2059 |
| MaeIII | GTNAC | 9 cut(s) | 91, 490, 779, 965, 1059, 1163, 1307, 1566, 1726 |
| MalI | GATC | 7 cut(s) | 130, 317, 597, 1500, 1629, 1872, 2049 |
| MboI | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| MboII | GAAGA | 8 cut(s) | 47, 131, 227, 230, 719, 944, 1713, 1813 |
| MfeI | CAATTG | 3 cut(s) | 258, 1397, 2223 |
| MflI | RGATCY | 2 cut(s) | 128, 315 |
| MhlI | GDGCHC | 1 cut(s) | 67 |
| MlyI | GAGTC | 2 cut(s) | 580, 1853 |
| MmeI | TCCRAC | 4 cut(s) | 303, 551, 609, 2044 |
| MnlI | CCTC | 9 cut(s) | 376, 525, 841, 922, 1018, 1207, 1554, 1788, 1903 |
| Mph1103I | ATGCAT | 2 cut(s) | 312, 1650 |
| MroI | TCCGGA | 1 cut(s) | 2268 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1808 |
| MslI | CAYNNNNRTG | 5 cut(s) | 204, 305, 730, 1656, 1956 |
| MspA1I | CMGCKG | 2 cut(s) | 1339, 2095 |
| MspI | CCGG | 2 cut(s) | 1268, 2269 |
| MunI | CAATTG | 3 cut(s) | 258, 1397, 2223 |
| MvnI | CGCG | 3 cut(s) | 785, 2300, 2302 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 62, 647, 1322, 2299 |
| NdeII | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| NlaIV | GGNNCC | 4 cut(s) | 474, 1960, 2151, 2294 |
| NmuCI | GTSAC | 3 cut(s) | 965, 1307, 1726 |
| NsiI | ATGCAT | 2 cut(s) | 312, 1650 |
| NspI | RCATGY | 4 cut(s) | 735, 1361, 1944, 2046 |
| NspV | TTCGAA | 2 cut(s) | 117, 1090 |
| PagI | TCATGA | 1 cut(s) | 1651 |
| PauI | GCGCGC | 1 cut(s) | 2300 |
| PciI | ACATGT | 1 cut(s) | 2042 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1552, 2056 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1808 |
| PfeI | GAWTC | 5 cut(s) | 691, 890, 1199, 1552, 1809 |
| PkrI | GCNGC | 6 cut(s) | 10, 150, 1704, 1975, 2054, 2094 |
| PleI | GAGTC | 2 cut(s) | 580, 1852 |
| PpsI | GAGTC | 2 cut(s) | 580, 1852 |
| PscI | ACATGT | 1 cut(s) | 2042 |
| PsiI | TTATAA | 1 cut(s) | 684 |
| PspN4I | GGNNCC | 4 cut(s) | 474, 1960, 2151, 2294 |
| PspPI | GGNCC | 1 cut(s) | 2150 |
| PsuI | RGATCY | 2 cut(s) | 128, 315 |
| PteI | GCGCGC | 1 cut(s) | 2300 |
| RsaI | GTAC | 7 cut(s) | 135, 390, 474, 674, 745, 1850, 1983 |
| RsaNI | GTAC | 7 cut(s) | 134, 389, 473, 673, 744, 1849, 1982 |
| RseI | CAYNNNNRTG | 5 cut(s) | 204, 305, 730, 1656, 1956 |
| SatI | GCNGC | 6 cut(s) | 9, 149, 1703, 1974, 2053, 2093 |
| Sau3AI | GATC | 7 cut(s) | 128, 315, 595, 1498, 1627, 1870, 2047 |
| Sau96I | GGNCC | 1 cut(s) | 2150 |
| SchI | GAGTC | 2 cut(s) | 580, 1853 |
| SduI | GDGCHC | 1 cut(s) | 67 |
| SfaNI | GCATC | 8 cut(s) | 67, 319, 361, 1291, 1525, 1657, 2011, 2233 |
| SfcI | CTRYAG | 1 cut(s) | 565 |
| SfuI | TTCGAA | 2 cut(s) | 117, 1090 |
| SinI | GGWCC | 1 cut(s) | 2150 |
| SmiI | ATTTAAAT | 1 cut(s) | 204 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 204, 305, 730, 1656, 1956 |
| SmlI | CTYRAG | 1 cut(s) | 2074 |
| SmoI | CTYRAG | 1 cut(s) | 2074 |
| SpeI | ACTAGT | 1 cut(s) | 13 |
| SsiI | CCGC | 8 cut(s) | 56, 149, 1064, 1184, 1339, 1625, 2093, 2298 |
| SspI | AATATT | 1 cut(s) | 2104 |
| SspMI | CTAG | 6 cut(s) | 14, 1374, 1430, 1937, 1992, 2108 |
| StyI | CCWWGG | 4 cut(s) | 124, 1099, 1733, 1977 |
| SwaI | ATTTAAAT | 1 cut(s) | 204 |
| TaaI | ACNGT | 5 cut(s) | 51, 446, 496, 1158, 1887 |
| TaiI | ACGT | 2 cut(s) | 1126, 2062 |
| TaqII | GACCGA | 1 cut(s) | 1000 |
| TauI | GCSGC | 2 cut(s) | 151, 2095 |
| TfiI | GAWTC | 5 cut(s) | 691, 890, 1199, 1552, 1809 |
| TscAI | CASTG | 2 cut(s) | 501, 565 |
| TseFI | GTSAC | 3 cut(s) | 965, 1307, 1726 |
| TseI | GCWGC | 4 cut(s) | 8, 1702, 1973, 2052 |
| Tsp45I | GTSAC | 3 cut(s) | 965, 1307, 1726 |
| TspGWI | ACGGA | 2 cut(s) | 285, 2184 |
| TspRI | CASTG | 2 cut(s) | 501, 565 |
| VpaK11BI | GGWCC | 1 cut(s) | 2150 |
| XapI | RAATTY | 2 cut(s) | 178, 1454 |
| XbaI | TCTAGA | 1 cut(s) | 2107 |
| XceI | RCATGY | 4 cut(s) | 735, 1361, 1944, 2046 |
| XmiI | GTMKAC | 3 cut(s) | 1029, 1491, 2080 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1808 |
| XspI | CTAG | 6 cut(s) | 14, 1374, 1430, 1937, 1992, 2108 |
| Zsp2I | ATGCAT | 2 cut(s) | 312, 1650 |