transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 952 |
| AccB1I | GGYRCC | 3 cut(s) | 262, 583, 713 |
| AciI | CCGC | 5 cut(s) | 732, 849, 852, 909, 951 |
| AcsI | RAATTY | 1 cut(s) | 463 |
| AcuI | CTGAAG | 1 cut(s) | 852 |
| AfeI | AGCGCT | 1 cut(s) | 897 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 115, 498, 710 |
| AflIII | ACRYGT | 1 cut(s) | 158 |
| AgsI | TTSAA | 4 cut(s) | 214, 453, 463, 725 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 862 |
| AhlI | ACTAGT | 1 cut(s) | 652 |
| AjnI | CCWGG | 1 cut(s) | 757 |
| AleI | CACNNNNGTG | 1 cut(s) | 885 |
| AluBI | AGCT | 4 cut(s) | 34, 74, 152, 677 |
| AluI | AGCT | 4 cut(s) | 34, 74, 152, 677 |
| Alw26I | GTCTC | 2 cut(s) | 896, 938 |
| Aor51HI | AGCGCT | 1 cut(s) | 897 |
| AoxI | GGCC | 1 cut(s) | 355 |
| ApeKI | GCWGC | 2 cut(s) | 746, 932 |
| ApoI | RAATTY | 1 cut(s) | 463 |
| AspLEI | GCGC | 1 cut(s) | 898 |
| AspS9I | GGNCC | 1 cut(s) | 954 |
| AsuHPI | GGTGA | 3 cut(s) | 22, 389, 821 |
| AvaII | GGWCC | 1 cut(s) | 954 |
| BaeGI | GKGCMC | 2 cut(s) | 619, 718 |
| BanI | GGYRCC | 3 cut(s) | 262, 583, 713 |
| BbsI | GAAGAC | 1 cut(s) | 858 |
| BbvI | GCAGC | 2 cut(s) | 733, 919 |
| BccI | CCATC | 2 cut(s) | 198, 494 |
| BceAI | ACGGC | 1 cut(s) | 394 |
| BciT130I | CCWGG | 1 cut(s) | 759 |
| BcoDI | GTCTC | 2 cut(s) | 896, 938 |
| BcuI | ACTAGT | 1 cut(s) | 652 |
| BfaI | CTAG | 5 cut(s) | 402, 653, 899, 948, 961 |
| BfoI | RGCGCY | 1 cut(s) | 899 |
| BisI | GCNGC | 5 cut(s) | 733, 747, 850, 853, 933 |
| BlsI | GCNGC | 5 cut(s) | 734, 748, 851, 854, 934 |
| Bme1390I | CCNGG | 1 cut(s) | 759 |
| Bme18I | GGWCC | 1 cut(s) | 954 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 862 |
| BmgT120I | GGNCC | 1 cut(s) | 954 |
| BmiI | GGNNCC | 4 cut(s) | 264, 585, 715, 955 |
| BmrFI | CCNGG | 1 cut(s) | 759 |
| BmrI | ACTGGG | 1 cut(s) | 712 |
| BmsI | GCATC | 2 cut(s) | 522, 541 |
| BmuI | ACTGGG | 1 cut(s) | 712 |
| BpiI | GAAGAC | 1 cut(s) | 858 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 107, 139 |
| Bpu10I | CCTNAGC | 1 cut(s) | 195 |
| BsaI | GGTCTC | 1 cut(s) | 896 |
| BsaJI | CCNNGG | 3 cut(s) | 114, 758, 883 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 661, 691 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 115, 498, 710 |
| Bse1I | ACTGG | 4 cut(s) | 109, 325, 358, 718 |
| BseBI | CCWGG | 1 cut(s) | 759 |
| BseDI | CCNNGG | 3 cut(s) | 114, 758, 883 |
| BseGI | GGATG | 2 cut(s) | 190, 634 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 115, 498, 710 |
| BseMII | CTCAG | 2 cut(s) | 186, 701 |
| BseNI | ACTGG | 4 cut(s) | 109, 325, 358, 718 |
| BseRI | GAGGAG | 1 cut(s) | 906 |
| BseSI | GKGCMC | 2 cut(s) | 619, 718 |
| BseXI | GCAGC | 2 cut(s) | 733, 919 |
| BshFI | GGCC | 1 cut(s) | 357 |
| BshNI | GGYRCC | 3 cut(s) | 262, 583, 713 |
| BsiSI | CCGG | 1 cut(s) | 957 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 115, 498, 710 |
| BsmAI | GTCTC | 2 cut(s) | 896, 938 |
| BsmI | GAATGC | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 357 |
| Bso31I | GGTCTC | 1 cut(s) | 896 |
| Bsp1286I | GDGCHC | 2 cut(s) | 619, 718 |
| Bsp19I | CCATGG | 1 cut(s) | 883 |
| BspACI | CCGC | 5 cut(s) | 732, 849, 852, 909, 951 |
| BspANI | GGCC | 1 cut(s) | 357 |
| BspCNI | CTCAG | 2 cut(s) | 187, 700 |
| BspLI | GGNNCC | 4 cut(s) | 264, 585, 715, 955 |
| BspT107I | GGYRCC | 3 cut(s) | 262, 583, 713 |
| BspTNI | GGTCTC | 1 cut(s) | 896 |
| BsrI | ACTGG | 4 cut(s) | 109, 325, 358, 718 |
| BssECI | CCNNGG | 3 cut(s) | 114, 758, 883 |
| BssT1I | CCWWGG | 1 cut(s) | 883 |
| Bst2UI | CCWGG | 1 cut(s) | 759 |
| Bst4CI | ACNGT | 1 cut(s) | 370 |
| Bst6I | CTCTTC | 2 cut(s) | 573, 613 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 834 |
| BstC8I | GCNNGC | 2 cut(s) | 136, 765 |
| BstDEI | CTNAG | 5 cut(s) | 195, 336, 497, 541, 687 |
| BstDSI | CCRYGG | 1 cut(s) | 883 |
| BstF5I | GGATG | 2 cut(s) | 190, 634 |
| BstH2I | RGCGCY | 1 cut(s) | 899 |
| BstHHI | GCGC | 1 cut(s) | 898 |
| BstMAI | GTCTC | 2 cut(s) | 896, 938 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 769, 834, 957 |
| BstNI | CCWGG | 1 cut(s) | 759 |
| BstNSI | RCATGY | 1 cut(s) | 162 |
| BstSCI | CCNGG | 1 cut(s) | 757 |
| BstSLI | GKGCMC | 2 cut(s) | 619, 718 |
| BstV1I | GCAGC | 2 cut(s) | 733, 919 |
| BstV2I | GAAGAC | 1 cut(s) | 858 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 887 |
| BsuRI | GGCC | 1 cut(s) | 357 |
| BtgI | CCRYGG | 1 cut(s) | 883 |
| BtgZI | GCGATG | 1 cut(s) | 472 |
| BtsCI | GGATG | 2 cut(s) | 190, 634 |
| BtsI | GCAGTG | 1 cut(s) | 835 |
| BtsIMutI | CAGTG | 1 cut(s) | 835 |
| Cac8I | GCNNGC | 2 cut(s) | 136, 765 |
| CfoI | GCGC | 1 cut(s) | 898 |
| Cfr13I | GGNCC | 1 cut(s) | 954 |
| CviAII | CATG | 6 cut(s) | 88, 159, 169, 310, 470, 884 |
| DdeI | CTNAG | 5 cut(s) | 195, 336, 497, 541, 687 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 952 |
| DriI | GACNNNNNGTC | 1 cut(s) | 862 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 952 |
| Eam1104I | CTCTTC | 2 cut(s) | 573, 613 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 862 |
| EarI | CTCTTC | 2 cut(s) | 573, 613 |
| Eco130I | CCWWGG | 1 cut(s) | 883 |
| Eco31I | GGTCTC | 1 cut(s) | 896 |
| Eco47I | GGWCC | 1 cut(s) | 954 |
| Eco47III | AGCGCT | 1 cut(s) | 897 |
| Eco57I | CTGAAG | 1 cut(s) | 852 |
| EcoRI | GAATTC | 1 cut(s) | 463 |
| EcoRII | CCWGG | 1 cut(s) | 757 |
| EcoT14I | CCWWGG | 1 cut(s) | 883 |
| EcoT22I | ATGCAT | 1 cut(s) | 147 |
| ErhI | CCWWGG | 1 cut(s) | 883 |
| FaeI | CATG | 6 cut(s) | 91, 162, 172, 313, 473, 887 |
| FatI | CATG | 6 cut(s) | 87, 158, 168, 309, 469, 883 |
| FauI | CCCGC | 1 cut(s) | 944 |
| Fnu4HI | GCNGC | 5 cut(s) | 733, 747, 850, 853, 933 |
| FokI | GGATG | 2 cut(s) | 177, 621 |
| Fsp4HI | GCNGC | 5 cut(s) | 733, 747, 850, 853, 933 |
| FspBI | CTAG | 5 cut(s) | 402, 653, 899, 948, 961 |
| GlaI | GCGC | 1 cut(s) | 897 |
| GluI | GCNGC | 5 cut(s) | 733, 747, 850, 853, 933 |
| HaeII | RGCGCY | 1 cut(s) | 899 |
| HaeIII | GGCC | 1 cut(s) | 357 |
| HapII | CCGG | 1 cut(s) | 957 |
| HhaI | GCGC | 1 cut(s) | 898 |
| Hin1II | CATG | 6 cut(s) | 91, 162, 172, 313, 473, 887 |
| Hin6I | GCGC | 1 cut(s) | 896 |
| HinP1I | GCGC | 1 cut(s) | 896 |
| HincII | GTYRAC | 1 cut(s) | 100 |
| HindII | GTYRAC | 1 cut(s) | 100 |
| HinfI | GANTC | 7 cut(s) | 46, 293, 700, 751, 780, 786, 875 |
| HpaII | CCGG | 1 cut(s) | 957 |
| HphI | GGTGA | 3 cut(s) | 22, 389, 821 |
| Hpy166II | GTNNAC | 2 cut(s) | 100, 446 |
| Hpy188I | TCNGA | 8 cut(s) | 25, 115, 184, 438, 531, 690, 785, 871 |
| Hpy188III | TCNNGA | 3 cut(s) | 54, 194, 596 |
| Hpy8I | GTNNAC | 2 cut(s) | 100, 446 |
| Hpy99I | CGWCG | 1 cut(s) | 860 |
| HpyAV | CCTTC | 3 cut(s) | 174, 459, 917 |
| HpyCH4III | ACNGT | 1 cut(s) | 370 |
| HpyCH4V | TGCA | 4 cut(s) | 134, 145, 313, 801 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 769, 834, 957 |
| HpyF3I | CTNAG | 5 cut(s) | 195, 336, 497, 541, 687 |
| Hsp92II | CATG | 6 cut(s) | 91, 162, 172, 313, 473, 887 |
| HspAI | GCGC | 1 cut(s) | 896 |
| LmnI | GCTCC | 3 cut(s) | 559, 682, 893 |
| Lsp1109I | GCAGC | 2 cut(s) | 733, 919 |
| LweI | GCATC | 2 cut(s) | 522, 541 |
| MaeI | CTAG | 5 cut(s) | 402, 653, 899, 948, 961 |
| MaeIII | GTNAC | 3 cut(s) | 316, 640, 667 |
| MboII | GAAGA | 4 cut(s) | 560, 590, 600, 858 |
| MhlI | GDGCHC | 2 cut(s) | 619, 718 |
| MluCI | AATT | 5 cut(s) | 217, 254, 431, 463, 661 |
| MlyI | GAGTC | 1 cut(s) | 55 |
| MmeI | TCCRAC | 1 cut(s) | 900 |
| Mph1103I | ATGCAT | 1 cut(s) | 147 |
| MseI | TTAA | 1 cut(s) | 222 |
| MslI | CAYNNNNRTG | 1 cut(s) | 885 |
| MspI | CCGG | 1 cut(s) | 957 |
| MspR9I | CCNGG | 1 cut(s) | 759 |
| Mva1269I | GAATGC | 1 cut(s) | 145 |
| MvaI | CCWGG | 1 cut(s) | 759 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 769, 834, 957 |
| NcoI | CCATGG | 1 cut(s) | 883 |
| NlaIII | CATG | 6 cut(s) | 91, 162, 172, 313, 473, 887 |
| NlaIV | GGNNCC | 4 cut(s) | 264, 585, 715, 955 |
| NmuCI | GTSAC | 1 cut(s) | 667 |
| NsiI | ATGCAT | 1 cut(s) | 147 |
| NspI | RCATGY | 1 cut(s) | 162 |
| OliI | CACNNNNGTG | 1 cut(s) | 885 |
| PciI | ACATGT | 1 cut(s) | 158 |
| PctI | GAATGC | 1 cut(s) | 145 |
| PfeI | GAWTC | 6 cut(s) | 293, 700, 751, 780, 786, 875 |
| PflFI | GACNNNGTC | 1 cut(s) | 104 |
| PkrI | GCNGC | 5 cut(s) | 734, 748, 851, 854, 934 |
| PleI | GAGTC | 1 cut(s) | 54 |
| PpsI | GAGTC | 1 cut(s) | 54 |
| PscI | ACATGT | 1 cut(s) | 158 |
| Psp6I | CCWGG | 1 cut(s) | 757 |
| PspGI | CCWGG | 1 cut(s) | 757 |
| PspN4I | GGNNCC | 4 cut(s) | 264, 585, 715, 955 |
| PspPI | GGNCC | 1 cut(s) | 954 |
| PsyI | GACNNNGTC | 1 cut(s) | 104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 885 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| SatI | GCNGC | 5 cut(s) | 733, 747, 850, 853, 933 |
| Sau96I | GGNCC | 1 cut(s) | 954 |
| SchI | GAGTC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 1 cut(s) | 759 |
| SduI | GDGCHC | 2 cut(s) | 619, 718 |
| SfaNI | GCATC | 2 cut(s) | 522, 541 |
| SinI | GGWCC | 1 cut(s) | 954 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 885 |
| SpeI | ACTAGT | 1 cut(s) | 652 |
| Sse9I | AATT | 5 cut(s) | 217, 254, 431, 463, 661 |
| SsiI | CCGC | 5 cut(s) | 732, 849, 852, 909, 951 |
| SspMI | CTAG | 5 cut(s) | 402, 653, 899, 948, 961 |
| StyD4I | CCNGG | 1 cut(s) | 757 |
| StyI | CCWWGG | 1 cut(s) | 883 |
| TaaI | ACNGT | 1 cut(s) | 370 |
| TaqI | TCGA | 3 cut(s) | 611, 778, 789 |
| TasI | AATT | 5 cut(s) | 217, 254, 431, 463, 661 |
| TauI | GCSGC | 3 cut(s) | 735, 852, 855 |
| TfiI | GAWTC | 6 cut(s) | 293, 700, 751, 780, 786, 875 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TscAI | CASTG | 1 cut(s) | 835 |
| TseFI | GTSAC | 1 cut(s) | 667 |
| TseI | GCWGC | 2 cut(s) | 746, 932 |
| Tsp45I | GTSAC | 1 cut(s) | 667 |
| TspDTI | ATGAA | 3 cut(s) | 298, 561, 591 |
| TspRI | CASTG | 1 cut(s) | 835 |
| Tth111I | GACNNNGTC | 1 cut(s) | 104 |
| VpaK11BI | GGWCC | 1 cut(s) | 954 |
| XapI | RAATTY | 1 cut(s) | 463 |
| XceI | RCATGY | 1 cut(s) | 162 |
| XspI | CTAG | 5 cut(s) | 402, 653, 899, 948, 961 |
| Zsp2I | ATGCAT | 1 cut(s) | 147 |